Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:26
| dataset id | cluster id | cluster name | cell type name | sample id | |
|---|---|---|---|---|---|
| 105 | 1 | K0 | Nephron progenitor | all | Details |
| 105 | 2 | K1 | Collecting duct-associated stroma | all | Details |
| 105 | 11 | K10 | Immune cells | all | Details |
| 105 | 12 | K11 | Vasculature | all | Details |
| 105 | 13 | K12 | Committing NP/PTA | all | Details |
| 105 | 14 | K13 | Stroma (Ureteric +) | all | Details |
| 105 | 15 | K14 | Stroma-related NP | all | Details |
| 105 | 16 | K15 | Podocyte | all | Details |
| 105 | 3 | K2 | Cortical Stroma | all | Details |
| 105 | 4 | K3 | CnS-Distal Tubule-Loop of Henle | all | Details |
| 105 | 5 | K4 | Medullary Stroma | all | Details |
| 105 | 6 | K5 | Early Proximal Tubule | all | Details |
| 105 | 7 | K6 | S-Shaped Body | all | Details |
| 105 | 8 | K7 | Renal Vesicle | all | Details |
| 105 | 9 | K8 | Proximal Tubule | all | Details |
| 105 | 10 | K9 | Ureteric Epithelium | all | Details |
| 105 | 17 | NP0 | N0 NP | all | Details |
| 105 | 18 | NP1 | all | Details | |
| 105 | 19 | NP2 | all | Details | |
| 105 | 20 | NP3 | N6 NP | all | Details |
| 105 | 21 | NP4 | N4 PTA | all | Details |
| 105 | 22 | NP5 | all | Details | |
| 105 | 23 | NP6 | all | Details | |
| 105 | 24 | NP7 | N10 NP-Str | all | Details |
| 105 | 25 | NP8 | K10 Immune | all | Details |
| 105 | 26 | NP9 | all | Details |