Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 9 | K8 | Proximal Tubule | all | Aldob | 230163 | 87995 | 6.71 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Ttc36 | 192653 | 2384760 | 6.48 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Spp2 | 75396 | 1922646 | 6.45 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Kap | 16483 | 96653 | 6.41 | 9.65e-197 | |||
105 | 9 | K8 | Proximal Tubule | all | Fxyd2 | 11936 | 1195260 | 6.33 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc34a1 | 20505 | 1345284 | 6.27 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Fbp1 | 14121 | 95492 | 6.21 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Gsta2 | 14858 | 95863 | 5.96 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Sult1d1 | 53315 | 1926341 | 5.96 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Spink1 | 20730 | 106202 | 5.82 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Ass1 | 11898 | 88090 | 5.82 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Lrp2 | 14725 | 95794 | 5.78 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Gatm | 67092 | 1914342 | 5.73 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Pdzk1 | 59020 | 1928901 | 5.69 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Nat8f1 | 66116 | 1913366 | 5.63 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Cltrn | 57394 | 1926234 | 5.62 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Napsa | 16541 | 109365 | 5.53 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Miox | 56727 | 1891725 | 5.46 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Pdzk1ip1 | 67182 | 1914432 | 5.43 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Aadat | 23923 | 1345167 | 5.37 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Fabp3 | 14077 | 95476 | 5.36 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Ggt1 | 14598 | 95706 | 5.31 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Gpx3 | 14778 | 105102 | 5.29 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc22a6 | 18399 | 892001 | 5.28 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Ttr | 22139 | 98865 | 5.23 | 3.28e-155 | |||
105 | 9 | K8 | Proximal Tubule | all | Mep1a | 17287 | 96963 | 5.18 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Acsm2 | 233799 | 2385289 | 5.08 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Anpep | 16790 | 5000466 | 5.04 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Fut9 | 14348 | 1330859 | 5.03 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc27a2 | 26458 | 1347099 | 4.91 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Gm10639 | 100042314 | 3704339 | 4.89 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Hao2 | 56185 | 96012 | 4.85 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Defb19 | 246700 | 2385955 | 4.83 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Calml4 | 75600 | 1922850 | 4.81 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Cyp2j5 | 13109 | 1270149 | 4.77 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Spp1 | 20750 | 98389 | 4.76 | 1.22e-113 | |||
105 | 9 | K8 | Proximal Tubule | all | Tmem174 | 68344 | 1915594 | 4.71 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Gm4450 | 100043461 | 3782634 | 4.67 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc5a8 | 216225 | 2384916 | 4.61 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Pck1 | 18534 | 97501 | 4.61 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Amn | 93835 | 1934943 | 4.59 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Hdc | 15186 | 96062 | 4.57 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc22a19 | 207151 | 2442751 | 4.5 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Keg1 | 64697 | 1928492 | 4.45 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Cyp2d26 | 76279 | 1923529 | 4.44 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Cldn2 | 12738 | 1276110 | 4.43 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Slc17a1 | 20504 | 103209 | 4.38 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Tmem252 | 226040 | 3583948 | 4.37 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Cela1 | 109901 | 95314 | 4.34 | 0 | |||
105 | 9 | K8 | Proximal Tubule | all | Kl | 16591 | 1101771 | 4.33 | 4.53e-304 |