Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 16 | K15 | Podocyte | all | R3hdml | 100043899 | 3650937 | 7.55 | 0 | |||
105 | 16 | K15 | Podocyte | all | Mafb | 16658 | 104555 | 6.86 | 4.72e-272 | |||
105 | 16 | K15 | Podocyte | all | Nphs2 | 170484 | 2157018 | 6.83 | 0 | |||
105 | 16 | K15 | Podocyte | all | Magi2 | 50791 | 1354953 | 6.3 | 8.81413112180784e-321 | |||
105 | 16 | K15 | Podocyte | all | Podxl | 27205 | 1351317 | 6.21 | 0 | |||
105 | 16 | K15 | Podocyte | all | Cdkn1c | 12577 | 104564 | 6.05 | 0 | |||
105 | 16 | K15 | Podocyte | all | Cldn5 | 12741 | 1276112 | 5.96 | 2.03e-298 | |||
105 | 16 | K15 | Podocyte | all | Nphs1 | 54631 | 1859637 | 5.84 | 2.29e-267 | |||
105 | 16 | K15 | Podocyte | all | Rasl11a | 68895 | 1916145 | 5.68 | 1.11e-244 | |||
105 | 16 | K15 | Podocyte | all | Rhpn1 | 14787 | 1098783 | 5.34 | 6.53e-184 | |||
105 | 16 | K15 | Podocyte | all | Pcp4 | 18546 | 97509 | 5.26 | 6.07e-123 | |||
105 | 16 | K15 | Podocyte | all | Gadd45a | 13197 | 107799 | 5.2 | 1.68e-211 | |||
105 | 16 | K15 | Podocyte | all | Nebl | 74103 | 1921353 | 5.13 | 3.39e-157 | |||
105 | 16 | K15 | Podocyte | all | Thsd7a | 330267 | 2685683 | 4.99 | 2.72e-159 | |||
105 | 16 | K15 | Podocyte | all | Tmem54 | 66260 | 1913510 | 4.85 | 1.21e-164 | |||
105 | 16 | K15 | Podocyte | all | Dpp4 | 13482 | 94919 | 4.85 | 1.38e-208 | |||
105 | 16 | K15 | Podocyte | all | Synpo | 104027 | 1099446 | 4.77 | 1.52e-143 | |||
105 | 16 | K15 | Podocyte | all | Hs3st6 | 328779 | 3580487 | 4.71 | 3.37e-218 | |||
105 | 16 | K15 | Podocyte | all | Mapt | 17762 | 97180 | 4.71 | 3.67e-172 | |||
105 | 16 | K15 | Podocyte | all | Ptpro | 19277 | 1097152 | 4.67 | 1.82e-197 | |||
105 | 16 | K15 | Podocyte | all | Wt1 | 22431 | 98968 | 4.67 | 7.5e-234 | |||
105 | 16 | K15 | Podocyte | all | Nell2 | 54003 | 1858510 | 4.41 | 6.55e-88 | |||
105 | 16 | K15 | Podocyte | all | Cd59a | 12509 | 109177 | 4.4 | 1.97e-105 | |||
105 | 16 | K15 | Podocyte | all | Npl | 74091 | 1921341 | 4.37 | 6.17e-120 | |||
105 | 16 | K15 | Podocyte | all | Rab3b | 69908 | 1917158 | 4.36 | 5.14e-89 | |||
105 | 16 | K15 | Podocyte | all | Srgap1 | 117600 | 2152936 | 4.35 | 1.38e-120 | |||
105 | 16 | K15 | Podocyte | all | Clic5 | 224796 | 1917912 | 4.28 | 1.8e-107 | |||
105 | 16 | K15 | Podocyte | all | Enpep | 13809 | 106645 | 4.25 | 3.43e-114 | |||
105 | 16 | K15 | Podocyte | all | Rtl8a | 66158 | 1913408 | 4.2 | 4.36e-160 | |||
105 | 16 | K15 | Podocyte | all | Plat | 18791 | 97610 | 4.13 | 4.19e-112 | |||
105 | 16 | K15 | Podocyte | all | Tmem150c | 231503 | 3041258 | 4.13 | 1.36e-106 | |||
105 | 16 | K15 | Podocyte | all | Gpsm3 | 106512 | 2146785 | 4.1 | 5.34e-132 | |||
105 | 16 | K15 | Podocyte | all | Aplp1 | 11803 | 88046 | 4.06 | 4.48e-93 | |||
105 | 16 | K15 | Podocyte | all | Lrrfip1 | 16978 | 1342770 | 4.04 | 2.36e-113 | |||
105 | 16 | K15 | Podocyte | all | Sema3g | 218877 | 3041242 | 3.95 | 2.08e-83 | |||
105 | 16 | K15 | Podocyte | all | Rassf10 | 78748 | 1925998 | 3.9 | 2.12e-86 | |||
105 | 16 | K15 | Podocyte | all | Iqgap2 | 544963 | 2449975 | 3.88 | 9.16e-81 | |||
105 | 16 | K15 | Podocyte | all | Nupr1 | 56312 | 1891834 | 3.86 | 3.06e-61 | |||
105 | 16 | K15 | Podocyte | all | Ndnf | 68169 | 1915419 | 3.85 | 6.63e-73 | |||
105 | 16 | K15 | Podocyte | all | Coro2b | 235431 | 2444283 | 3.83 | 5.07e-93 | |||
105 | 16 | K15 | Podocyte | all | Gm266 | 212539 | 2685112 | 3.8 | 8.44e-130 | |||
105 | 16 | K15 | Podocyte | all | Igfbp7 | 29817 | 1352480 | 3.79 | 1.03e-125 | |||
105 | 16 | K15 | Podocyte | all | Rtl8b | 553127 | 3576504 | 3.75 | 2.92e-107 | |||
105 | 16 | K15 | Podocyte | all | Sgip1 | 73094 | 1920344 | 3.74 | 1.43e-65 | |||
105 | 16 | K15 | Podocyte | all | Metrnl | 210029 | 2384806 | 3.69 | 1.15e-71 | |||
105 | 16 | K15 | Podocyte | all | Zbtb7c | 207259 | 2443302 | 3.68 | 7.25e-65 | |||
105 | 16 | K15 | Podocyte | all | Gpc1 | 14733 | 1194891 | 3.63 | 1.07e-82 | |||
105 | 16 | K15 | Podocyte | all | Neat1 | 66961 | 1914211 | 3.61 | 1.32e-39 | |||
105 | 16 | K15 | Podocyte | all | Mmp23 | 26561 | 1347361 | 3.59 | 1.68e-67 | |||
105 | 16 | K15 | Podocyte | all | Ackr3 | 12778 | 109562 | 3.58 | 2.45e-46 |