Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 1 | K0 | Nephron progenitor | all | Cited1 | 12705 | 108023 | 4.24 | 0 | |||
105 | 1 | K0 | Nephron progenitor | all | Crym | 12971 | 102675 | 3.25 | 0 | |||
105 | 1 | K0 | Nephron progenitor | all | Meox1 | 17285 | 103220 | 3.2 | 1.76e-274 | |||
105 | 1 | K0 | Nephron progenitor | all | Six2 | 20472 | 102778 | 3.19 | 0 | |||
105 | 1 | K0 | Nephron progenitor | all | Traf1 | 22029 | 101836 | 3.03 | 1.67e-293 | |||
105 | 1 | K0 | Nephron progenitor | all | Uncx | 22255 | 108013 | 3.01 | 5.76e-278 | |||
105 | 1 | K0 | Nephron progenitor | all | Eya1 | 14048 | 109344 | 2.98 | 6.50679514916463e-319 | |||
105 | 1 | K0 | Nephron progenitor | all | Spock2 | 94214 | 1891351 | 2.91 | 0 | |||
105 | 1 | K0 | Nephron progenitor | all | Fxyd6 | 59095 | 1890226 | 2.66 | 0 | |||
105 | 1 | K0 | Nephron progenitor | all | Robo2 | 268902 | 1890110 | 2.64 | 2.38e-269 | |||
105 | 1 | K0 | Nephron progenitor | all | Elavl4 | 15572 | 107427 | 2.64 | 2.05e-186 | |||
105 | 1 | K0 | Nephron progenitor | all | Tgfbi | 21810 | 99959 | 2.61 | 1.31e-237 | |||
105 | 1 | K0 | Nephron progenitor | all | Rspo1 | 192199 | 2183426 | 2.59 | 6.64e-207 | |||
105 | 1 | K0 | Nephron progenitor | all | Cped1 | 214642 | 2444814 | 2.58 | 6.16e-243 | |||
105 | 1 | K0 | Nephron progenitor | all | Gas1 | 14451 | 95655 | 2.56 | 6.58461542904109e-318 | |||
105 | 1 | K0 | Nephron progenitor | all | Ocm | 18261 | 97401 | 2.55 | 1.88e-109 | |||
105 | 1 | K0 | Nephron progenitor | all | Shisa2 | 219134 | 2444716 | 2.43 | 4.13e-141 | |||
105 | 1 | K0 | Nephron progenitor | all | Siglecg | 243958 | 2443630 | 2.38 | 3e-133 | |||
105 | 1 | K0 | Nephron progenitor | all | Mest | 17294 | 96968 | 2.33 | 1.07e-199 | |||
105 | 1 | K0 | Nephron progenitor | all | Tril | 66873 | 1914123 | 2.31 | 1.58e-178 | |||
105 | 1 | K0 | Nephron progenitor | all | Capn6 | 12338 | 1100850 | 2.31 | 2.25e-156 | |||
105 | 1 | K0 | Nephron progenitor | all | Ttc28 | 209683 | 2140873 | 2.29 | 3.55e-168 | |||
105 | 1 | K0 | Nephron progenitor | all | Btbd11 | 74007 | 1921257 | 2.25 | 4.23e-113 | |||
105 | 1 | K0 | Nephron progenitor | all | Snap91 | 20616 | 109132 | 2.25 | 2.18e-119 | |||
105 | 1 | K0 | Nephron progenitor | all | Slc1a3 | 20512 | 99917 | 2.23 | 2.6e-111 | |||
105 | 1 | K0 | Nephron progenitor | all | Pnmt | 18948 | 97724 | 2.22 | 1.08e-101 | |||
105 | 1 | K0 | Nephron progenitor | all | Tpm2 | 22004 | 98810 | 2.22 | 1.07e-158 | |||
105 | 1 | K0 | Nephron progenitor | all | Osr1 | 23967 | 1344424 | 2.19 | 3.03e-105 | |||
105 | 1 | K0 | Nephron progenitor | all | Fgf1 | 14164 | 95515 | 2.18 | 1.88e-119 | |||
105 | 1 | K0 | Nephron progenitor | all | Il33 | 77125 | 1924375 | 2.17 | 8.36e-80 | |||
105 | 1 | K0 | Nephron progenitor | all | Hs3st6 | 328779 | 3580487 | 2.15 | 2.49e-142 | |||
105 | 1 | K0 | Nephron progenitor | all | Espn | 56226 | 1861630 | 2.15 | 4.51e-117 | |||
105 | 1 | K0 | Nephron progenitor | all | Wt1 | 22431 | 98968 | 2.15 | 5.56e-135 | |||
105 | 1 | K0 | Nephron progenitor | all | 2610028E06Rik | 72395 | 1919645 | 2.15 | 8.44e-113 | |||
105 | 1 | K0 | Nephron progenitor | all | Vcan | 13003 | 102889 | 2.14 | 6.7e-127 | |||
105 | 1 | K0 | Nephron progenitor | all | Clmp | 71566 | 1918816 | 2.13 | 2.43e-152 | |||
105 | 1 | K0 | Nephron progenitor | all | Pdgfc | 54635 | 1859631 | 2.13 | 3.94e-120 | |||
105 | 1 | K0 | Nephron progenitor | all | Cldn9 | 56863 | 1913100 | 2.13 | 7.28e-109 | |||
105 | 1 | K0 | Nephron progenitor | all | Kif26b | 269152 | 2447076 | 2.13 | 1.16e-99 | |||
105 | 1 | K0 | Nephron progenitor | all | Meox2 | 17286 | 103219 | 2.1 | 6.05e-110 | |||
105 | 1 | K0 | Nephron progenitor | all | Hist3h2ba | 78303 | 1925553 | 2.09 | 3.47e-131 | |||
105 | 1 | K0 | Nephron progenitor | all | Hmga2 | 15364 | 101761 | 2.09 | 2.47e-109 | |||
105 | 1 | K0 | Nephron progenitor | all | Pax2 | 18504 | 97486 | 2.07 | 2.11e-110 | |||
105 | 1 | K0 | Nephron progenitor | all | Etv4 | 18612 | 99423 | 2 | 8.02e-87 | |||
105 | 1 | K0 | Nephron progenitor | all | Prxl2a | 70564 | 1917814 | 1.99 | 4.84e-129 | |||
105 | 1 | K0 | Nephron progenitor | all | Scx | 20289 | 102934 | 1.95 | 3.46e-82 | |||
105 | 1 | K0 | Nephron progenitor | all | Hoxc10 | 209448 | 96192 | 1.93 | 6.71e-121 | |||
105 | 1 | K0 | Nephron progenitor | all | Des | 13346 | 94885 | 1.92 | 2.44e-81 | |||
105 | 1 | K0 | Nephron progenitor | all | Dcx | 13193 | 1277171 | 1.91 | 5.13e-70 | |||
105 | 1 | K0 | Nephron progenitor | all | Bcl2 | 12043 | 88138 | 1.89 | 1.58e-85 |