Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 14 | K13 | Stroma (Ureteric +) | all | Dlk1 | 13386 | 94900 | 7.57 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Dcn | 13179 | 94872 | 6.89 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Meg3 | 17263 | 1202886 | 6.64 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col1a1 | 12842 | 88467 | 6.12 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Clec3b | 21922 | 104540 | 6.03 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Postn | 50706 | 1926321 | 6.01 | 1.99e-170 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col3a1 | 12825 | 88453 | 5.93 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Lum | 17022 | 109347 | 5.89 | 2.82e-149 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Mfap5 | 50530 | 1354387 | 5.8 | 4.28e-289 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Itm2a | 16431 | 107706 | 5.56 | 8.28e-247 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col1a2 | 12843 | 88468 | 5.4 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Stmn2 | 20257 | 98241 | 5.22 | 3.64e-79 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Tppp3 | 67971 | 1915221 | 5.13 | 1.45e-221 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Igf1 | 16000 | 96432 | 5.13 | 4.01e-223 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Igfbp6 | 16012 | 96441 | 5.06 | 1.48e-191 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Upk3b | 100647 | 2140882 | 4.94 | 7.25e-70 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Aspn | 66695 | 1913945 | 4.9 | 8.56e-207 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Rarres2 | 71660 | 1918910 | 4.88 | 0 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Agtr2 | 11609 | 87966 | 4.81 | 7.31e-171 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Fbln2 | 14115 | 95488 | 4.77 | 8.19e-228 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Dpt | 56429 | 1928392 | 4.75 | 1.08e-215 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Pi16 | 74116 | 1921366 | 4.71 | 2.76e-147 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Eln | 13717 | 95317 | 4.7 | 1.62e-236 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Krt19 | 16669 | 96693 | 4.64 | 6.25e-93 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col6a1 | 12833 | 88459 | 4.54 | 1.09e-267 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col14a1 | 12818 | 1341272 | 4.54 | 3.05e-205 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Cd34 | 12490 | 88329 | 4.52 | 1.27e-281 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col6a2 | 12834 | 88460 | 4.38 | 5.4e-222 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Ogn | 18295 | 109278 | 4.34 | 3.3e-182 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col5a2 | 12832 | 88458 | 4.3 | 7.02e-247 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Nrk | 27206 | 1351326 | 4.29 | 7.8e-150 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col6a3 | 12835 | 88461 | 4.17 | 1.27e-206 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Tnxb | 81877 | 1932137 | 4.17 | 2.46e-189 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | S100a6 | 20200 | 1339467 | 4.15 | 4.71e-142 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Lgals7 | 16858 | 1316742 | 4.08 | 9.85e-92 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Cthrc1 | 68588 | 1915838 | 4.08 | 2.33e-94 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col5a1 | 12831 | 88457 | 4.05 | 1.98e-184 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Lox | 16948 | 96817 | 4.04 | 3.24e-135 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Gsn | 227753 | 95851 | 4.04 | 1.12e-152 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Fbn1 | 14118 | 95489 | 4.04 | 1.25e-173 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Smoc2 | 64074 | 1929881 | 4.02 | 2.05e-52 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Plagl1 | 22634 | 1100874 | 3.99 | 3.6e-172 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Tmem158 | 72309 | 1919559 | 3.93 | 2.38e-105 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Fst | 14313 | 95586 | 3.92 | 5.98e-94 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Cd248 | 70445 | 1917695 | 3.88 | 6.14e-160 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Pcolce | 18542 | 105099 | 3.88 | 1.13e-176 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Col5a3 | 53867 | 1858212 | 3.88 | 8.93e-156 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Spon2 | 100689 | 1923724 | 3.88 | 1.36e-130 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Prrx1 | 18933 | 97712 | 3.86 | 1.81e-92 | |||
105 | 14 | K13 | Stroma (Ureteric +) | all | Sparc | 20692 | 98373 | 3.83 | 5.41e-270 |