Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 10 | K9 | Ureteric Epithelium | all | Calb1 | 12307 | 88248 | 6.13 | 5.2e-198 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Upk3a | 22270 | 98914 | 6.08 | 1.26e-108 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Rprm | 67874 | 1915124 | 5.92 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Aqp2 | 11827 | 1096865 | 5.37 | 1.95e-80 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Sprr1a | 20753 | 106660 | 5.25 | 1.56e-82 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Crlf1 | 12931 | 1340030 | 5.06 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Krt18 | 16668 | 96692 | 4.95 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Lcn2 | 16819 | 96757 | 4.89 | 4.35e-163 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Psca | 72373 | 1919623 | 4.88 | 6.61e-60 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Epcam | 17075 | 106653 | 4.75 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Gata3 | 14462 | 95663 | 4.71 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Sprr2f | 20760 | 1330349 | 4.67 | 1.24e-39 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Wfdc2 | 67701 | 1914951 | 4.41 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Krt19 | 16669 | 96693 | 4.38 | 8.82e-126 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Wfdc15b | 192201 | 2445041 | 4.25 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Fxyd4 | 108017 | 1889005 | 4.22 | 1.24e-68 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Krt8 | 16691 | 96705 | 4.16 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Cldn8 | 54420 | 1859286 | 4.15 | 2.68e-277 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Krt23 | 94179 | 2148866 | 4.15 | 8.36e-208 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Cldn3 | 12739 | 1329044 | 4.14 | 2.66795448754273e-322 | |||
105 | 10 | K9 | Ureteric Epithelium | all | S100a6 | 20200 | 1339467 | 4.09 | 4.46e-281 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Upk1a | 109637 | 98911 | 4.04 | 2.33e-62 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Spink8 | 78709 | 1925959 | 4.03 | 7.19e-64 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Mal2 | 105853 | 2146021 | 4.01 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Fxyd3 | 17178 | 107497 | 4 | 5.21e-89 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Upk1b | 22268 | 98912 | 3.93 | 1.14e-79 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Mal | 17153 | 892970 | 3.93 | 1.72e-267 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Foxq1 | 15220 | 1298228 | 3.86 | 4.76e-83 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Cldn7 | 53624 | 1859285 | 3.85 | 0 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Mia | 12587 | 109615 | 3.8 | 5.76e-282 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Ret | 19713 | 97902 | 3.79 | 3.48e-267 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Upk2 | 22269 | 98913 | 3.74 | 5.38e-51 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Sox9 | 20682 | 98371 | 3.71 | 2.28e-151 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Sptssb | 66183 | 1913433 | 3.68 | 9.55e-64 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Rab25 | 53868 | 1858203 | 3.61 | 1.75e-279 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Krt7 | 110310 | 96704 | 3.6 | 6.6e-120 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Tesc | 57816 | 1930803 | 3.52 | 1.97e-197 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Aldh1a3 | 56847 | 1861722 | 3.51 | 2.25e-102 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Cldn4 | 12740 | 1313314 | 3.43 | 1.46e-208 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Gfra1 | 14585 | 1100842 | 3.36 | 9.09e-212 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Pdzk1ip1 | 67182 | 1914432 | 3.35 | 2.7e-145 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Ehf | 13661 | 1270840 | 3.33 | 2.74e-232 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Sfn | 55948 | 1891831 | 3.31 | 5.87e-92 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Cdh16 | 12556 | 106671 | 3.28 | 1.65e-169 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Plet1 | 76509 | 1923759 | 3.26 | 2.8e-125 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Ctse | 13034 | 107361 | 3.24 | 2.82e-62 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Slco4c1 | 227394 | 2442784 | 3.24 | 5.82e-203 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Tacstd2 | 56753 | 1861606 | 3.23 | 2.31e-102 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Kcnk1 | 16525 | 109322 | 3.23 | 4.27e-228 | |||
105 | 10 | K9 | Ureteric Epithelium | all | Spint2 | 20733 | 1338031 | 3.2 | 0 |