Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 12 | K11 | Vasculature | all | Fabp4 | 11770 | 88038 | 8.15 | 0 | |||
105 | 12 | K11 | Vasculature | all | Plvap | 84094 | 1890497 | 6.33 | 0 | |||
105 | 12 | K11 | Vasculature | all | Fam167b | 230766 | 2668032 | 5.87 | 0 | |||
105 | 12 | K11 | Vasculature | all | Gimap4 | 107526 | 1349656 | 5.74 | 0 | |||
105 | 12 | K11 | Vasculature | all | Aplnr | 23796 | 1346086 | 5.72 | 0 | |||
105 | 12 | K11 | Vasculature | all | Emcn | 59308 | 1891716 | 5.57 | 0 | |||
105 | 12 | K11 | Vasculature | all | Gpihbp1 | 68453 | 1915703 | 5.44 | 0 | |||
105 | 12 | K11 | Vasculature | all | Icam2 | 15896 | 96394 | 5.38 | 0 | |||
105 | 12 | K11 | Vasculature | all | Rsad2 | 58185 | 1929628 | 5.28 | 0 | |||
105 | 12 | K11 | Vasculature | all | Cdh5 | 12562 | 105057 | 5.22 | 0 | |||
105 | 12 | K11 | Vasculature | all | Pecam1 | 18613 | 97537 | 5.21 | 0 | |||
105 | 12 | K11 | Vasculature | all | Cldn5 | 12741 | 1276112 | 5.15 | 0 | |||
105 | 12 | K11 | Vasculature | all | Esam | 69524 | 1916774 | 5.14 | 0 | |||
105 | 12 | K11 | Vasculature | all | Gimap6 | 231931 | 1918876 | 5.02 | 0 | |||
105 | 12 | K11 | Vasculature | all | Cd34 | 12490 | 88329 | 4.96 | 0 | |||
105 | 12 | K11 | Vasculature | all | Cd93 | 17064 | 106664 | 4.9 | 0 | |||
105 | 12 | K11 | Vasculature | all | Rgcc | 66214 | 1913464 | 4.87 | 0 | |||
105 | 12 | K11 | Vasculature | all | Egfl7 | 353156 | 2449923 | 4.81 | 0 | |||
105 | 12 | K11 | Vasculature | all | Flt1 | 14254 | 95558 | 4.76 | 0 | |||
105 | 12 | K11 | Vasculature | all | Kdr | 16542 | 96683 | 4.73 | 0 | |||
105 | 12 | K11 | Vasculature | all | Ednrb | 13618 | 102720 | 4.68 | 0 | |||
105 | 12 | K11 | Vasculature | all | Ctla2a | 13024 | 88554 | 4.61 | 0 | |||
105 | 12 | K11 | Vasculature | all | Gimap1 | 16205 | 109368 | 4.6 | 0 | |||
105 | 12 | K11 | Vasculature | all | Sox17 | 20671 | 107543 | 4.59 | 1.08e-288 | |||
105 | 12 | K11 | Vasculature | all | Myct1 | 68632 | 1915882 | 4.57 | 0 | |||
105 | 12 | K11 | Vasculature | all | Tie1 | 21846 | 99906 | 4.54 | 0 | |||
105 | 12 | K11 | Vasculature | all | Ecscr | 68545 | 1915795 | 4.51 | 0 | |||
105 | 12 | K11 | Vasculature | all | Pcdh17 | 219228 | 2684924 | 4.47 | 0 | |||
105 | 12 | K11 | Vasculature | all | Clec14a | 66864 | 1914114 | 4.45 | 0 | |||
105 | 12 | K11 | Vasculature | all | Plpp1 | 19012 | 108412 | 4.43 | 0 | |||
105 | 12 | K11 | Vasculature | all | Gng11 | 66066 | 1913316 | 4.41 | 0 | |||
105 | 12 | K11 | Vasculature | all | Bst2 | 69550 | 1916800 | 4.26 | 0 | |||
105 | 12 | K11 | Vasculature | all | Rasip1 | 69903 | 1917153 | 4.25 | 0 | |||
105 | 12 | K11 | Vasculature | all | Sgk1 | 20393 | 1340062 | 4.23 | 2.76e-156 | |||
105 | 12 | K11 | Vasculature | all | Cd38 | 12494 | 107474 | 4.22 | 0 | |||
105 | 12 | K11 | Vasculature | all | Eng | 13805 | 95392 | 4.22 | 0 | |||
105 | 12 | K11 | Vasculature | all | Vamp5 | 53620 | 1858622 | 4.2 | 0 | |||
105 | 12 | K11 | Vasculature | all | Ly6c1 | 17067 | 96882 | 4.18 | 6.33e-255 | |||
105 | 12 | K11 | Vasculature | all | Isg15 | 100038882 | 1855694 | 4.16 | 2.07e-187 | |||
105 | 12 | K11 | Vasculature | all | Gimap5 | 317757 | 2442232 | 4.16 | 0 | |||
105 | 12 | K11 | Vasculature | all | Tmem88 | 67020 | 1914270 | 4.12 | 0 | |||
105 | 12 | K11 | Vasculature | all | Lmo2 | 16909 | 102811 | 4.05 | 1.18e-256 | |||
105 | 12 | K11 | Vasculature | all | Ifi44 | 99899 | 2443016 | 4.04 | 6.53e-267 | |||
105 | 12 | K11 | Vasculature | all | Cavin2 | 20324 | 99513 | 4.03 | 1.06e-179 | |||
105 | 12 | K11 | Vasculature | all | Tek | 21687 | 98664 | 4.03 | 0 | |||
105 | 12 | K11 | Vasculature | all | Adgrl4 | 170757 | 2655562 | 4.02 | 0 | |||
105 | 12 | K11 | Vasculature | all | Mmrn2 | 105450 | 2385618 | 3.99 | 7.64285172492507e-311 | |||
105 | 12 | K11 | Vasculature | all | Sox18 | 20672 | 103559 | 3.96 | 0 | |||
105 | 12 | K11 | Vasculature | all | Ifitm3 | 66141 | 1913391 | 3.95 | 0 | |||
105 | 12 | K11 | Vasculature | all | Prex2 | 109294 | 1923385 | 3.9 | 6.17e-277 |