Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 13 | K12 | Committing NP/PTA | all | Cited1 | 12705 | 108023 | 3.47 | 2.41e-116 | |||
105 | 13 | K12 | Committing NP/PTA | all | Six2 | 20472 | 102778 | 3.16 | 8.18e-162 | |||
105 | 13 | K12 | Committing NP/PTA | all | Pclaf | 68026 | 1915276 | 2.89 | 7.16e-40 | |||
105 | 13 | K12 | Committing NP/PTA | all | Eya1 | 14048 | 109344 | 2.88 | 4.72e-135 | |||
105 | 13 | K12 | Committing NP/PTA | all | Uncx | 22255 | 108013 | 2.79 | 3.88e-98 | |||
105 | 13 | K12 | Committing NP/PTA | all | Spock2 | 94214 | 1891351 | 2.65 | 2.58e-100 | |||
105 | 13 | K12 | Committing NP/PTA | all | Crym | 12971 | 102675 | 2.5 | 3.41e-67 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hist1h2ap | 319171 | 3710573 | 2.46 | 3.33e-19 | |||
105 | 13 | K12 | Committing NP/PTA | all | Elavl4 | 15572 | 107427 | 2.39 | 1.35e-69 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hist1h1b | 56702 | 1861461 | 2.29 | 7.45e-20 | |||
105 | 13 | K12 | Committing NP/PTA | all | Pax2 | 18504 | 97486 | 2.25 | 4.31e-65 | |||
105 | 13 | K12 | Committing NP/PTA | all | Snap91 | 20616 | 109132 | 2.25 | 9.12e-55 | |||
105 | 13 | K12 | Committing NP/PTA | all | Dtl | 76843 | 1924093 | 2.19 | 9.01e-33 | |||
105 | 13 | K12 | Committing NP/PTA | all | Meox1 | 17285 | 103220 | 2.16 | 1.88e-49 | |||
105 | 13 | K12 | Committing NP/PTA | all | Fxyd6 | 59095 | 1890226 | 2.16 | 8.84e-66 | |||
105 | 13 | K12 | Committing NP/PTA | all | Cped1 | 214642 | 2444814 | 2.15 | 1.71e-62 | |||
105 | 13 | K12 | Committing NP/PTA | all | Uhrf1 | 18140 | 1338889 | 2.14 | 3.52e-36 | |||
105 | 13 | K12 | Committing NP/PTA | all | Siglecg | 243958 | 2443630 | 2.12 | 3.92e-48 | |||
105 | 13 | K12 | Committing NP/PTA | all | Pdgfc | 54635 | 1859631 | 2.1 | 1.04e-51 | |||
105 | 13 | K12 | Committing NP/PTA | all | Rspo1 | 192199 | 2183426 | 2.07 | 4.64e-48 | |||
105 | 13 | K12 | Committing NP/PTA | all | Rrm2 | 20135 | 98181 | 2.06 | 5.99e-18 | |||
105 | 13 | K12 | Committing NP/PTA | all | Gas1 | 14451 | 95655 | 2.05 | 2.22e-55 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hmga2 | 15364 | 101761 | 2.05 | 5.61e-48 | |||
105 | 13 | K12 | Committing NP/PTA | all | Tril | 66873 | 1914123 | 2.04 | 1.58e-49 | |||
105 | 13 | K12 | Committing NP/PTA | all | Ung | 22256 | 109352 | 2.03 | 3.59e-22 | |||
105 | 13 | K12 | Committing NP/PTA | all | Meox2 | 17286 | 103219 | 2.02 | 1.31e-48 | |||
105 | 13 | K12 | Committing NP/PTA | all | Vcan | 13003 | 102889 | 2.02 | 5.87e-41 | |||
105 | 13 | K12 | Committing NP/PTA | all | Etv4 | 18612 | 99423 | 2 | 1.11e-41 | |||
105 | 13 | K12 | Committing NP/PTA | all | Shisa2 | 219134 | 2444716 | 2 | 1.37e-37 | |||
105 | 13 | K12 | Committing NP/PTA | all | Traf1 | 22029 | 101836 | 1.97 | 8.56e-42 | |||
105 | 13 | K12 | Committing NP/PTA | all | Capn6 | 12338 | 1100850 | 1.96 | 1.78e-43 | |||
105 | 13 | K12 | Committing NP/PTA | all | Wt1 | 22431 | 98968 | 1.96 | 2.04e-40 | |||
105 | 13 | K12 | Committing NP/PTA | all | Atad2 | 70472 | 1917722 | 1.94 | 9.31e-25 | |||
105 | 13 | K12 | Committing NP/PTA | all | Lig1 | 16881 | 101789 | 1.94 | 2.49e-21 | |||
105 | 13 | K12 | Committing NP/PTA | all | Robo2 | 268902 | 1890110 | 1.91 | 7.04e-39 | |||
105 | 13 | K12 | Committing NP/PTA | all | Slc1a3 | 20512 | 99917 | 1.9 | 2.84e-33 | |||
105 | 13 | K12 | Committing NP/PTA | all | Top2a | 21973 | 98790 | 1.9 | 5.56e-09 | |||
105 | 13 | K12 | Committing NP/PTA | all | Sall1 | 58198 | 1889585 | 1.87 | 4.44e-38 | |||
105 | 13 | K12 | Committing NP/PTA | all | Kif26b | 269152 | 2447076 | 1.84 | 3.78e-30 | |||
105 | 13 | K12 | Committing NP/PTA | all | Clspn | 269582 | 2445153 | 1.84 | 6.29e-21 | |||
105 | 13 | K12 | Committing NP/PTA | all | Ttc28 | 209683 | 2140873 | 1.81 | 1.72e-31 | |||
105 | 13 | K12 | Committing NP/PTA | all | Dut | 110074 | 1346051 | 1.8 | 7.24e-31 | |||
105 | 13 | K12 | Committing NP/PTA | all | Mybl2 | 17865 | 101785 | 1.79 | 5.53e-22 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hs3st6 | 328779 | 3580487 | 1.79 | 9.3e-40 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hells | 15201 | 106209 | 1.77 | 8.98e-19 | |||
105 | 13 | K12 | Committing NP/PTA | all | Fgf1 | 14164 | 95515 | 1.76 | 2.87e-33 | |||
105 | 13 | K12 | Committing NP/PTA | all | Stmn1 | 16765 | 96739 | 1.76 | 3.71e-23 | |||
105 | 13 | K12 | Committing NP/PTA | all | Tcf19 | 106795 | 103180 | 1.74 | 4.16e-15 | |||
105 | 13 | K12 | Committing NP/PTA | all | Hist1h4i | 319158 | 2448432 | 1.72 | 9.18e-18 | |||
105 | 13 | K12 | Committing NP/PTA | all | Cenpw | 66311 | 1913561 | 1.72 | 3.2e-17 |