Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 6 | K5 | Early Proximal Tubule | all | Sult1d1 | 53315 | 1926341 | 4.76 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Spink1 | 20730 | 106202 | 4.76 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Aldob | 230163 | 87995 | 4.68 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Hdc | 15186 | 96062 | 4.49 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Pdzk1 | 59020 | 1928901 | 4.48 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Slc34a1 | 20505 | 1345284 | 4.39 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Fut9 | 14348 | 1330859 | 4.21 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Fxyd2 | 11936 | 1195260 | 4.16 | 3.07e-294 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Osr2 | 107587 | 1930813 | 4.14 | 2.78e-253 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Slc39a5 | 72002 | 1919336 | 4.13 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Keg1 | 64697 | 1928492 | 4.09 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Cpn1 | 93721 | 2135874 | 4.02 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Ttc36 | 192653 | 2384760 | 4.01 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Ly6a | 110454 | 107527 | 3.93 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Calml4 | 75600 | 1922850 | 3.92 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Amn | 93835 | 1934943 | 3.9 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Ggt1 | 14598 | 95706 | 3.89 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Lrp2 | 14725 | 95794 | 3.88 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Hnf4a | 15378 | 109128 | 3.83 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Cltrn | 57394 | 1926234 | 3.78 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Cldn6 | 54419 | 1859284 | 3.76 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Car4 | 12351 | 1096574 | 3.73 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Cyp4a31 | 666168 | 3028580 | 3.73 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Folr1 | 14275 | 95568 | 3.73 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Npnt | 114249 | 2148811 | 3.72 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Mep1a | 17287 | 96963 | 3.6 | 4.95037562575352e-311 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Serpina1a | 20700 | 891971 | 3.59 | 1.2e-275 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Dao | 13142 | 94859 | 3.5 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Tmem174 | 68344 | 1915594 | 3.48 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Hao2 | 56185 | 96012 | 3.47 | 5.85e-291 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Clec18a | 353287 | 2672935 | 3.34 | 4.01256906194036e-310 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Clu | 12759 | 88423 | 3.3 | 1.08e-242 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Asb9 | 69299 | 1916549 | 3.29 | 2.90615228237607e-311 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Rida | 15473 | 1095401 | 3.27 | 0 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Kif12 | 16552 | 1098232 | 3.26 | 4.50893186754377e-315 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Acsm2 | 233799 | 2385289 | 3.26 | 2.54e-266 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Gm4450 | 100043461 | 3782634 | 3.24 | 7.22e-298 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Rbm47 | 245945 | 2384294 | 3.22 | 4.59e-307 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Dcdc2a | 195208 | 2652818 | 3.2 | 2.84267586253803e-318 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Spp2 | 75396 | 1922646 | 3.19 | 2.5e-141 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Acaa1b | 235674 | 3605455 | 3.19 | 2.52e-239 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Adamts1 | 11504 | 109249 | 3.19 | 8.45e-150 | |||
105 | 6 | K5 | Early Proximal Tubule | all | B3gat2 | 280645 | 2389490 | 3.16 | 2.61e-268 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Atp1b1 | 11931 | 88108 | 3.16 | 5.43e-254 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Enpp2 | 18606 | 1321390 | 3.15 | 6.79e-185 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Susd3 | 66329 | 1913579 | 3.14 | 9.4e-300 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Tmem252 | 226040 | 3583948 | 3.13 | 7.66e-201 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Ass1 | 11898 | 88090 | 3.12 | 1.14e-190 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Steap2 | 74051 | 1921301 | 3.11 | 1.35e-271 | |||
105 | 6 | K5 | Early Proximal Tubule | all | Krt8 | 16691 | 96705 | 3.07 | 5.65e-203 |