Marker Genes

Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk

  • tissue: Kidney
  • ontology: Kidney
  • genotype: C57BL/6
  • stage: Fetal
  • treatment condition: WT

Rows:71
dataset id cluster id cluster name cell type name sample id gene symbol entrez geneid species specific geneid
avg log fc (?)
pct 1 pct 2 p value padj
105 20 NP3 N6 NP all Cbx3 12417 108515 1.25 0.99 0.79 0 0
105 20 NP3 N6 NP all Rpgrip1 77945 1932134 1.01 0.73 0.28 9.67E-281 1.32E-276
105 20 NP3 N6 NP all Actb 11461 87904 1 1 1 0 0
105 20 NP3 N6 NP all Notch2 18129 97364 0.85 0.62 0.16 2.47E-301 3.37E-297
105 20 NP3 N6 NP all Kdm6b 216850 2448492 0.81 0.84 0.47 2.5E-234 3.42E-230
105 20 NP3 N6 NP all Pdcd4 18569 107490 0.78 0.9 0.68 2.37E-197 3.24E-193
105 20 NP3 N6 NP all Gnb1 14688 95781 0.78 0.99 0.87 0 0
105 20 NP3 N6 NP all Slc24a5 317750 2677271 0.71 0.77 0.35 3.66E-227 5.01E-223
105 20 NP3 N6 NP all Slc39a1 30791 1353474 0.68 0.54 0.13 2.08E-245 2.85E-241
105 20 NP3 N6 NP all Marf1 223989 2444505 0.65 0.68 0.24 6.72E-239 9.2E-235
105 20 NP3 N6 NP all Kdelr2 66913 1914163 0.64 0.9 0.74 1.89E-172 2.59E-168
105 20 NP3 N6 NP all Spry2 24064 1345138 0.61 0.5 0.11 8.85E-245 1.21E-240
105 20 NP3 N6 NP all Paip1 218693 2384993 0.58 0.75 0.38 7.65E-178 1.05E-173
105 20 NP3 N6 NP all Dpysl2 12934 1349763 0.58 0.86 0.64 2.36E-162 3.23E-158
105 20 NP3 N6 NP all Myef2 17876 104592 0.56 0.82 0.57 5.17E-154 7.07E-150
105 20 NP3 N6 NP all Ppp1r16b 228852 2151841 0.56 0.59 0.25 3.56E-144 4.88E-140
105 20 NP3 N6 NP all Supt16 114741 1890948 0.55 0.85 0.73 8.04E-106 1.1E-101
105 20 NP3 N6 NP all Otub1 107260 2147616 0.54 0.73 0.46 2.89E-133 3.95E-129
105 20 NP3 N6 NP all Kmt2d 381022 2682319 0.52 0.56 0.17 4.35E-206 5.95E-202
105 20 NP3 N6 NP all Pfas 237823 2684864 0.52 0.66 0.35 6.22E-132 8.52E-128
105 20 NP3 N6 NP all Rbm15 229700 2443205 0.52 0.55 0.21 8.53E-152 1.17E-147
105 20 NP3 N6 NP all Lrrc8a 241296 2652847 0.49 0.58 0.21 1.59E-166 2.17E-162
105 20 NP3 N6 NP all Gsk3b 56637 1861437 0.46 0.92 0.88 2.03E-113 2.78E-109
105 20 NP3 N6 NP all Alkbh5 268420 2144489 0.46 0.75 0.58 1.95E-85 2.67E-81
105 20 NP3 N6 NP all Ncam1 17967 97281 0.45 0.93 0.87 3.29E-70 4.5E-66
105 20 NP3 N6 NP all Peg12 27412 1351637 0.44 0.57 0.3 1.15E-92 1.57E-88
105 20 NP3 N6 NP all Mcmbp 210711 1920977 0.43 0.74 0.56 1.15E-86 1.58E-82
105 20 NP3 N6 NP all Gatad1 67210 1914460 0.43 0.75 0.55 1.76E-88 2.41E-84
105 20 NP3 N6 NP all Arglu1 234023 2442985 0.43 0.81 0.7 3.02E-79 4.13E-75
105 20 NP3 N6 NP all Zscan26 432731 3531417 0.42 0.46 0.15 4.88E-146 6.68E-142
105 20 NP3 N6 NP all Sox11 20666 98359 0.4 0.97 0.96 4.78E-100 6.53E-96
105 20 NP3 N6 NP all Ssr1 107513 105082 0.36 0.88 0.8 2.03E-79 2.78E-75
105 20 NP3 N6 NP all Rrn3 106298 1925255 0.36 0.58 0.36 3.62E-72 4.95E-68
105 20 NP3 N6 NP all Amt 434437 3646700 0.35 0.29 0.06 1.2E-130 1.65E-126
105 20 NP3 N6 NP all Wtap 60532 1926395 0.35 0.85 0.78 5.98E-60 8.19E-56
105 20 NP3 N6 NP all Aug-98 NULL 0.34 0.77 0.66 6.28E-54 8.6E-50
105 20 NP3 N6 NP all Skil 20482 106203 0.33 0.55 0.35 1.15E-53 1.58E-49
105 20 NP3 N6 NP all St13 70356 1917606 0.33 0.97 0.95 6.8E-98 9.31E-94
105 20 NP3 N6 NP all Klhl9 242521 2180122 0.32 0.66 0.52 3.89E-46 5.32E-42
105 20 NP3 N6 NP all Acot2 171210 2159605 0.32 0.31 0.1 5.38E-82 7.36E-78
105 20 NP3 N6 NP all Slc25a36 192287 1924909 0.31 0.58 0.44 1.12E-36 1.53E-32
105 20 NP3 N6 NP all Dusp3 72349 1919599 0.3 0.41 0.24 2.96E-39 4.05E-35
105 20 NP3 N6 NP all Yme1l1 27377 1351651 0.3 0.71 0.6 8.84E-42 1.21E-37
105 20 NP3 N6 NP all Ncoa3 17979 1276535 0.3 0.35 0.12 7.71E-86 1.05E-81
105 20 NP3 N6 NP all Nr2f2 11819 1352452 0.29 0.97 0.96 1.03E-50 1.41E-46
105 20 NP3 N6 NP all Dctn4 67665 1914915 0.29 0.43 0.26 1.6E-41 2.19E-37
105 20 NP3 N6 NP all D17H6S53E 114585 90673 0.29 0.26 0.04 1.25E-152 1.71E-148
105 20 NP3 N6 NP all Cask 12361 1309489 0.29 0.66 0.56 4.29E-31 5.87E-27
105 20 NP3 N6 NP all 4933434E20Rik 99650 1914027 0.29 0.75 0.65 1.72E-42 2.35E-38
105 20 NP3 N6 NP all Efna5 13640 107444 0.28 0.48 0.38 2.2E-19 3.01E-15
105 20 NP3 N6 NP all Ric1 226089 1924893 0.28 0.26 0.09 4.25E-70 5.82E-66
105 20 NP3 N6 NP all Nras 18176 97376 0.28 0.83 0.79 2.44E-45 3.34E-41
105 20 NP3 N6 NP all Set 56086 1860267 0.28 0.99 0.99 2.73E-84 3.73E-80
105 20 NP3 N6 NP all Klf13 50794 1354948 0.28 0.62 0.48 1.11E-34 1.52E-30
105 20 NP3 N6 NP all Sdc4 20971 1349164 0.27 0.43 0.33 1.71E-19 2.35E-15
105 20 NP3 N6 NP all Pan3 72587 1919837 0.27 0.34 0.23 1.14E-22 1.56E-18
105 20 NP3 N6 NP all Golt1b 66964 1914214 0.27 0.56 0.41 1.01E-35 1.38E-31
105 20 NP3 N6 NP all Ythdf2 213541 2444233 0.27 0.83 0.8 6.17E-40 8.44E-36
105 20 NP3 N6 NP all Hsf2 15500 96239 0.26 0.31 0.14 2.5E-47 3.43E-43
105 20 NP3 N6 NP all Insig1 231070 1916289 0.26 0.4 0.29 3.05E-19 4.17E-15
105 20 NP3 N6 NP all Rdh13 108841 1918732 0.26 0.34 0.15 1.24E-57 1.7E-53
105 20 NP3 N6 NP all Fxyd4 108017 1889005 0.25 0.22 0.06 2.08E-72 2.84E-68
105 20 NP3 N6 NP all Gsdme 54722 1889850 0.25 0.47 0.35 7.94E-26 1.09E-21
105 20 NP3 N6 NP all Ado 211488 2685083 0.25 0.7 0.65 8.52E-29 1.17E-24
105 20 NP3 N6 NP all Cenpa 12615 88375 -0.26 0.33 0.44 1.34E-12 1.84E-8
105 20 NP3 N6 NP all Cdc20 107995 1859866 -0.27 0.29 0.43 1.1E-16 1.51E-12
105 20 NP3 N6 NP all Hmgb2 97165 96157 -0.29 0.92 0.95 4.64E-15 6.35E-11
105 20 NP3 N6 NP all Ccnb2 12442 88311 -0.29 0.26 0.39 9.28E-17 1.27E-12
105 20 NP3 N6 NP all Ctsb 13030 88561 -0.34 0.58 0.7 7.7E-7 0.01
105 20 NP3 N6 NP all Rrm2 20135 98181 -0.35 0.44 0.54 1.54E-11 2.1E-7
105 20 NP3 N6 NP all Apoe 11816 88057 -1.23 0.18 0.22 0.005682108621323 1