Marker Genes
Dataset: Single cell analysis of the developing mouse kidney provides deeper insight into marker gene expression and ligand-receptor crosstalk
- tissue: Kidney
- ontology: Kidney
- genotype: C57BL/6
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 31118232
- subset name: all
- total genes: 13116
- clustering: Seurat, edgeR
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE108291
Rows:50
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
105 | 15 | K14 | Stroma-related NP | all | Cited1 | 12705 | 108023 | 3.14 | 9.97e-46 | |||
105 | 15 | K14 | Stroma-related NP | all | Acta2 | 11475 | 87909 | 2.59 | 2.26e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Six2 | 20472 | 102778 | 2.56 | 2.03e-53 | |||
105 | 15 | K14 | Stroma-related NP | all | Penk | 18619 | 104629 | 2.36 | 1.2e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Col3a1 | 12825 | 88453 | 2.31 | 1.5e-31 | |||
105 | 15 | K14 | Stroma-related NP | all | Cfh | 12628 | 88385 | 2.27 | 4.27e-30 | |||
105 | 15 | K14 | Stroma-related NP | all | Col14a1 | 12818 | 1341272 | 2.25 | 4.9e-30 | |||
105 | 15 | K14 | Stroma-related NP | all | Crym | 12971 | 102675 | 2.21 | 1.44e-27 | |||
105 | 15 | K14 | Stroma-related NP | all | Dcn | 13179 | 94872 | 2.19 | 5.24e-14 | |||
105 | 15 | K14 | Stroma-related NP | all | Tpm2 | 22004 | 98810 | 2.17 | 1.01e-32 | |||
105 | 15 | K14 | Stroma-related NP | all | Gucy1a1 | 60596 | 1926562 | 2.15 | 3.22e-33 | |||
105 | 15 | K14 | Stroma-related NP | all | Tcf21 | 21412 | 1202715 | 2.11 | 9.97e-26 | |||
105 | 15 | K14 | Stroma-related NP | all | Sfrp1 | 20377 | 892014 | 2.1 | 4.21e-24 | |||
105 | 15 | K14 | Stroma-related NP | all | Uncx | 22255 | 108013 | 2.1 | 5.99e-24 | |||
105 | 15 | K14 | Stroma-related NP | all | Robo2 | 268902 | 1890110 | 2.08 | 8.65e-30 | |||
105 | 15 | K14 | Stroma-related NP | all | Hmcn1 | 545370 | 2685047 | 2.07 | 3.87e-27 | |||
105 | 15 | K14 | Stroma-related NP | all | Fbln5 | 23876 | 1346091 | 2.07 | 1.67e-26 | |||
105 | 15 | K14 | Stroma-related NP | all | Eya1 | 14048 | 109344 | 2.06 | 1.47e-33 | |||
105 | 15 | K14 | Stroma-related NP | all | Col1a2 | 12843 | 88468 | 2.01 | 7.39e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Myl9 | 98932 | 2138915 | 2.01 | 6.81e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Tril | 66873 | 1914123 | 2.01 | 1.54e-27 | |||
105 | 15 | K14 | Stroma-related NP | all | Cped1 | 214642 | 2444814 | 1.98 | 1.48e-30 | |||
105 | 15 | K14 | Stroma-related NP | all | Lbh | 77889 | 1925139 | 1.94 | 2.55e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Ace2 | 70008 | 1917258 | 1.92 | 4.69e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Traf1 | 22029 | 101836 | 1.91 | 9.87e-25 | |||
105 | 15 | K14 | Stroma-related NP | all | Spock2 | 94214 | 1891351 | 1.9 | 5.83e-22 | |||
105 | 15 | K14 | Stroma-related NP | all | Col6a2 | 12834 | 88460 | 1.89 | 1.15e-22 | |||
105 | 15 | K14 | Stroma-related NP | all | Col1a1 | 12842 | 88467 | 1.88 | 7.01e-13 | |||
105 | 15 | K14 | Stroma-related NP | all | Rgs5 | 19737 | 1098434 | 1.87 | 1.16e-14 | |||
105 | 15 | K14 | Stroma-related NP | all | Snap91 | 20616 | 109132 | 1.86 | 1.8e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Vegfd | 14205 | 108037 | 1.85 | 3.61e-24 | |||
105 | 15 | K14 | Stroma-related NP | all | Meg3 | 17263 | 1202886 | 1.85 | 1.52e-11 | |||
105 | 15 | K14 | Stroma-related NP | all | Col6a1 | 12833 | 88459 | 1.83 | 1.88e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Zeb2 | 24136 | 1344407 | 1.82 | 1.84e-17 | |||
105 | 15 | K14 | Stroma-related NP | all | Itga8 | 241226 | 109442 | 1.81 | 1.6e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Tagln | 21345 | 106012 | 1.8 | 7.07e-07 | |||
105 | 15 | K14 | Stroma-related NP | all | Snai2 | 20583 | 1096393 | 1.8 | 6.26e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Meox1 | 17285 | 103220 | 1.8 | 7.98e-22 | |||
105 | 15 | K14 | Stroma-related NP | all | Col15a1 | 12819 | 88449 | 1.8 | 8.81e-17 | |||
105 | 15 | K14 | Stroma-related NP | all | Cldn11 | 18417 | 106925 | 1.8 | 9.51e-11 | |||
105 | 15 | K14 | Stroma-related NP | all | Cdh11 | 12552 | 99217 | 1.79 | 9.8e-25 | |||
105 | 15 | K14 | Stroma-related NP | all | Tgfbi | 21810 | 99959 | 1.79 | 2.7e-16 | |||
105 | 15 | K14 | Stroma-related NP | all | Pdgfrb | 18596 | 97531 | 1.78 | 1.64e-18 | |||
105 | 15 | K14 | Stroma-related NP | all | Bgn | 12111 | 88158 | 1.78 | 8.48e-21 | |||
105 | 15 | K14 | Stroma-related NP | all | Vcan | 13003 | 102889 | 1.78 | 7.73e-15 | |||
105 | 15 | K14 | Stroma-related NP | all | Igfbp3 | 16009 | 96438 | 1.77 | 4.49e-14 | |||
105 | 15 | K14 | Stroma-related NP | all | Fxyd6 | 59095 | 1890226 | 1.75 | 1.07e-16 | |||
105 | 15 | K14 | Stroma-related NP | all | Rspo1 | 192199 | 2183426 | 1.75 | 3.37e-19 | |||
105 | 15 | K14 | Stroma-related NP | all | Pnmt | 18948 | 97724 | 1.75 | 1.44e-20 | |||
105 | 15 | K14 | Stroma-related NP | all | Ttc28 | 209683 | 2140873 | 1.75 | 1.82e-16 |