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Gene:
  • lrp5
  • 568518
  • ZDB-GENE-050518-2

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(35,34,32,33) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:63
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-050518-2 0.684191 9.67742 LRP5
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-050518-2 0.0119174 0.18315 LRP5
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-050518-2 0.00835916 0.19084 LRP5
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-050518-2 0.018131 0.647249 LRP5
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-050518-2 0.0116413 0.322581 LRP5
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-050518-2 0.00912137 0.50505 LRP5
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-050518-2 0.478118 11.2317 lrp5
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-050518-2 0.139614 4.0521 lrp5
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-050518-2 0.146068 4.21972 lrp5
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-050518-2 0.154118 4.22794 lrp5
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-050518-2 0.169853 5.33049 lrp5
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-050518-2 0.129044 3.69444 lrp5
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-050518-2 0.169665 5.40984 lrp5
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-050518-2 0.16922 3.37956 lrp5
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-050518-2 0.167792 7.07071 lrp5
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-050518-2 0.167472 5.86701 lrp5
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-050518-2 0.131299 3.05344 lrp5
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-050518-2 0.128157 2.71041 lrp5
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-050518-2 0.155309 4.71281 lrp5
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-050518-2 0.121328 4.32099 lrp5
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-050518-2 0.29505 8.15806 lrp5
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-050518-2 0.156916 5.2774 lrp5
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-050518-2 0.154159 4.02999 lrp5
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-050518-2 0.154797 4.11946 lrp5
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-050518-2 0.1468 3.52627 lrp5
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-050518-2 0.15617 4.04624 lrp5
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-050518-2 0.133558 3.15436 lrp5
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-050518-2 0.356622 10.2964 lrp5
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-050518-2 0.129116 10 lrp5
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-050518-2 0.141868 3.0303 lrp5
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-050518-2 0.143988 10 lrp5
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-050518-2 0.12987 4.87805 lrp5
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-050518-2 0.0600044 3.92157 lrp5
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-050518-2 0.120837 7.8125 lrp5
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-050518-2 0.110041 4 lrp5
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-050518-2 0.0802092 4.54545 lrp5
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-050518-2 0.113851 5.73248 lrp5
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-050518-2 0.0690738 3.61446 lrp5
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-050518-2 0.0702078 3.79147 lrp5
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-050518-2 0.0208714 2.77778 lrp5
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-050518-2 0.0377961 2.17391 lrp5
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-050518-2 0.0971326 2.94118 lrp5
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-050518-2 0.0323499 1.19048 lrp5
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-050518-2 0.108637 2.85714 lrp5
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-050518-2 0.245653 14.2857 lrp5
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-050518-2 0.154883 10 lrp5
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-050518-2 0.0640611 4.34783 lrp5
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-050518-2 0.275103 10 lrp5
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-050518-2 0.0799233 2.94118 lrp5
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-050518-2 0.108104 5.95238 lrp5
id 31018142 Brain PBS 35 Markers PC_8 ZDB-GENE-050518-2 0.453968 25 lrp5
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-050518-2 0.171942 3.33333 lrp5
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-050518-2 0.0468617 2.17391 lrp5
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-050518-2 0.0189168 0.497512 lrp5
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-050518-2 0.0492252 2.63158 lrp5
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-050518-2 0.0522259 3.22581 lrp5
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-050518-2 0.215666 4.7619 lrp5
id 31018142 Brain merged 32 Markers Im ZDB-GENE-050518-2 0.0963614 2.12766 lrp5
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-050518-2 0.27185 14.2857 lrp5
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-050518-2 0.0425526 4.16667 lrp5
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-050518-2 0.150372 5.45455 lrp5
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-050518-2 0.0801768 4.29448 lrp5
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-050518-2 0.32568 4.34783 lrp5