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Gene:
  • cadm1b
  • 562183
  • ZDB-GENE-080327-34

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,34,35) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:89
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-080327-34 0.823826 20.339 CADM1B
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-080327-34 5.93221 74.5342 CADM1B
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-080327-34 2.24653 33.6683 CADM1B
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-080327-34 2.846 38.7097 CADM1B
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-080327-34 0.788594 12.2581 CADM1B
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-080327-34 4.61315 44.6565 CADM1B
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-080327-34 0.663795 11.6162 CADM1B
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-080327-34 0.233482 4.30464 CADM1B
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-080327-34 0.138774 4.85437 CADM1B
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-080327-34 0.0770399 1.80723 CADM1B
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-080327-34 0.2342 4.30403 CADM1B
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-080327-34 0.746326 14.7059 CADM1B
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-080327-34 0.559438 11.8644 CADM1B
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-080327-34 0.723441 14.359 CADM1B
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-080327-34 0.397049 7.62712 CADM1B
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-080327-34 0.833187 16.7279 cadm1b
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-080327-34 0.0595293 1.98732 cadm1b
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-080327-34 0.381261 9.47226 cadm1b
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-080327-34 0.203265 3.74883 cadm1b
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-080327-34 0.110136 3.29557 cadm1b
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-080327-34 0.126138 2.585 cadm1b
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-080327-34 0.353724 6.9471 cadm1b
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-080327-34 0.427051 7.83558 cadm1b
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-080327-34 0.481995 8.70185 cadm1b
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-080327-34 0.333075 5.90604 cadm1b
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-080327-34 0.134668 3.38733 cadm1b
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-080327-34 0.160635 5.09259 cadm1b
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-080327-34 0.126162 2.01249 cadm1b
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-080327-34 0.220429 4.8745 cadm1b
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-080327-34 0.427229 9.88889 cadm1b
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-080327-34 0.270742 8.36066 cadm1b
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-080327-34 0.219666 3.0448 cadm1b
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-080327-34 0.149568 4.371 cadm1b
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-080327-34 0.152986 5.80808 cadm1b
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-080327-34 0.0462135 1.85067 cadm1b
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-080327-34 0.235332 6.91004 cadm1b
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-080327-34 0.224788 5.93343 cadm1b
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-080327-34 1.38193 26.3682 cadm1b
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-080327-34 0.00750455 0.613497 cadm1b
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-080327-34 0.181563 4.83871 cadm1b
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-080327-34 0.244201 9.09091 cadm1b
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-080327-34 2.46712 42.5 cadm1b
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-080327-34 0.0757146 4 cadm1b
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-080327-34 0.37365 10.1796 cadm1b
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-080327-34 0.0563749 2.63158 cadm1b
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-080327-34 0.328255 6.06061 cadm1b
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-080327-34 2.42988 47.8261 cadm1b
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-080327-34 2.0583 39.2857 cadm1b
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-080327-34 0.206545 13.8889 cadm1b
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-080327-34 2.09706 47.0588 cadm1b
id 31018142 Brain IL4 34 Markers NN_5 ZDB-GENE-080327-34 1.78571 20 cadm1b
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-080327-34 0.533049 7.14286 cadm1b
id 31018142 Brain IL4 34 Markers NN_6 ZDB-GENE-080327-34 1.35405 25 cadm1b
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-080327-34 0.0684556 1.81818 cadm1b
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-080327-34 0.0298352 2.43902 cadm1b
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-080327-34 0.750813 7.31707 cadm1b
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-080327-34 1.78403 25 cadm1b
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-080327-34 2.75537 37.5 cadm1b
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-080327-34 0.326051 10.3448 cadm1b
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-080327-34 0.520671 9.09091 cadm1b
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-080327-34 0.848487 11.7647 cadm1b
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-080327-34 0.0482395 4.34783 cadm1b
id 31018142 Brain PBS 35 Markers PC_7 ZDB-GENE-080327-34 0.210318 11.1111 cadm1b
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-080327-34 0.0376261 1.27389 cadm1b
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-080327-34 0.191351 2.5641 cadm1b
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-080327-34 0.0154332 0.947867 cadm1b
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-080327-34 0.0386742 1.11111 cadm1b
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-080327-34 0.123171 3.62319 cadm1b
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-080327-34 1.47992 33.3333 cadm1b
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-080327-34 0.301652 18.75 cadm1b
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-080327-34 0.0265554 1.20482 cadm1b
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-080327-34 0.938033 16.9811 cadm1b
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-080327-34 0.377287 10.3896 cadm1b
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-080327-34 1.70035 23.3918 cadm1b
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-080327-34 1.18256 24 cadm1b
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-080327-34 0.461245 9.09091 cadm1b
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-080327-34 0.704364 40 cadm1b
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-080327-34 2.08988 36.2069 cadm1b
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-080327-34 0.581193 14.2857 cadm1b
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-080327-34 0.190013 9.52381 cadm1b
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-080327-34 1.92727 22.2222 cadm1b
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-080327-34 0.465379 5.71429 cadm1b
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-080327-34 1.69152 32.3529 cadm1b
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-080327-34 0.451175 9.375 cadm1b
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-080327-34 0.268615 5.88235 cadm1b
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-080327-34 0.0717009 4.34783 cadm1b
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-080327-34 0.0125274 1.19048 cadm1b
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-080327-34 2.8224 41.6667 cadm1b
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-080327-34 0.105475 3.0303 cadm1b