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Gene:
  • rnf130
  • 553950
  • ZDB-GENE-050522-525

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(35,34,32,33) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:109
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-050522-525 1.7075 45.6311 RNF130
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-050522-525 2.11831 33.1502 RNF130
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-050522-525 1.83904 35.5932 RNF130
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-050522-525 1.45688 23.6025 RNF130
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-050522-525 1.11535 19.3548 RNF130
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-050522-525 1.39665 28.8136 RNF130
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-050522-525 2.02759 37.1795 RNF130
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-050522-525 0.931064 39.4231 RNF130
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-050522-525 2.19938 40.201 RNF130
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-050522-525 1.96756 34.4371 RNF130
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-050522-525 1.21741 22.8916 RNF130
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-050522-525 1.48541 28.7097 RNF130
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-050522-525 0.759742 17.6471 RNF130
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-050522-525 2.76067 53.8168 RNF130
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-050522-525 0.759068 20.7071 RNF130
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-050522-525 0.692218 15.678 RNF130
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-050522-525 0.555453 9.16031 rnf130
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-050522-525 0.453616 8.83958 rnf130
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-050522-525 0.300402 6.91667 rnf130
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-050522-525 0.547773 13.0328 rnf130
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-050522-525 0.358775 5.37223 rnf130
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-050522-525 0.599728 12.1535 rnf130
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-050522-525 0.522298 16.0354 rnf130
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-050522-525 0.333436 7.0836 rnf130
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-050522-525 0.615595 15.8409 rnf130
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-050522-525 0.522467 10.9986 rnf130
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-050522-525 0.200836 5.37948 rnf130
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-050522-525 0.35649 10.6481 rnf130
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-050522-525 0.545775 13.6671 rnf130
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-050522-525 0.433165 8.57545 rnf130
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-050522-525 0.638117 11.4315 rnf130
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-050522-525 0.466509 7.53021 rnf130
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-050522-525 0.837628 14.1491 rnf130
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-050522-525 0.71657 10.79 rnf130
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-050522-525 0.443573 8.98716 rnf130
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-050522-525 0.604513 9.86577 rnf130
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-050522-525 0.465133 7.8056 rnf130
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-050522-525 0.590807 8.82353 rnf130
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-050522-525 0.431295 16.6667 rnf130
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-050522-525 0.402694 5.76923 rnf130
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-050522-525 0.368273 6.06061 rnf130
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-050522-525 0.648127 18.9655 rnf130
id 31018142 Brain PBS 35 Markers Im ZDB-GENE-050522-525 0.774099 28.5714 rnf130
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-050522-525 0.970303 20 rnf130
id 31018142 Brain PBS 35 Markers OPC_OD_2 ZDB-GENE-050522-525 1.59404 60 rnf130
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-050522-525 1.53166 57.1429 rnf130
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-050522-525 0.494731 5.88235 rnf130
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-050522-525 0.391281 8.33333 rnf130
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-050522-525 0.125881 10 rnf130
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-050522-525 0.088343 5.73248 rnf130
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-050522-525 0.15453 6.74847 rnf130
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-050522-525 0.0739751 4.73934 rnf130
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-050522-525 1.40323 45.4545 rnf130
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-050522-525 0.839017 25 rnf130
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-050522-525 0.160326 3.33333 rnf130
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-050522-525 0.3646 10.1796 rnf130
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-050522-525 0.249431 7.01754 rnf130
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-050522-525 1.20269 21.2121 rnf130
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-050522-525 0.208315 11.7647 rnf130
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-050522-525 0.511705 11.9048 rnf130
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-050522-525 0.326445 9.52381 rnf130
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-050522-525 0.0818414 4.87805 rnf130
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-050522-525 0.0476752 3.63636 rnf130
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-050522-525 0.171215 11.1111 rnf130
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-050522-525 0.826104 12.1951 rnf130
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-050522-525 0.0725558 4 rnf130
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-050522-525 0.834537 18.75 rnf130
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-050522-525 0.246507 6.89655 rnf130
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-050522-525 0.0886613 6 rnf130
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-050522-525 3.19023 42.8571 rnf130
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-050522-525 0.920532 18.1818 rnf130
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-050522-525 0.255925 14.2857 rnf130
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-050522-525 0.452248 20 rnf130
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-050522-525 1.24676 20 rnf130
id 31018142 Brain PBS 35 Markers PC_7 ZDB-GENE-050522-525 0.210517 11.1111 rnf130
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-050522-525 0.0291263 1.96078 rnf130
id 31018142 Brain PBS 35 Markers NN_6 ZDB-GENE-050522-525 0.558971 10 rnf130
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-050522-525 0.196607 5.26316 rnf130
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-050522-525 0.0974791 7.14286 rnf130
id 31018142 Brain IL4 34 Markers NN_5 ZDB-GENE-050522-525 2.03331 40 rnf130
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-050522-525 0.0995174 6.25 rnf130
id 31018142 Brain IL4 34 Markers NN_6 ZDB-GENE-050522-525 1.57828 12.5 rnf130
id 31018142 Brain PBS 35 Markers PC_8 ZDB-GENE-050522-525 1.35798 50 rnf130
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-050522-525 0.0802575 2.43902 rnf130
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-050522-525 0.136386 8.69565 rnf130
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-050522-525 0.562975 9.95025 rnf130
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-050522-525 0.446432 8.77193 rnf130
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-050522-525 0.128203 8.06452 rnf130
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-050522-525 2.30424 33.3333 rnf130
id 31018142 Brain merged 32 Markers Im ZDB-GENE-050522-525 0.340629 10.6383 rnf130
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-050522-525 0.559328 23.8095 rnf130
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-050522-525 0.0496478 2.89855 rnf130
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-050522-525 0.463908 12 rnf130
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-050522-525 0.154637 10.4167 rnf130
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-050522-525 0.128384 7.89474 rnf130
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-050522-525 0.383966 7.54717 rnf130
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-050522-525 0.0894036 4.81928 rnf130
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-050522-525 0.792111 26.087 rnf130
id 31018142 Brain IL4 34 Markers OPC_OD_1 ZDB-GENE-050522-525 2.65008 40 rnf130
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-050522-525 0.107621 3.8961 rnf130
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-050522-525 1.82236 25.7143 rnf130
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-050522-525 1.43152 33.3333 rnf130
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-050522-525 0.469065 9.375 rnf130
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-050522-525 0.280682 11.7647 rnf130
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-050522-525 0.0989717 4.34783 rnf130
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-050522-525 0.242567 9.72222 rnf130
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-050522-525 0.0437055 2.17391 rnf130
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-050522-525 1.31499 38.0952 rnf130
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-050522-525 0.0577421 4.54545 rnf130