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Gene:
  • rbm34
  • 436655
  • ZDB-GENE-040718-77

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:86
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-040718-77 0.159347 4.00763 RBM34
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-040718-77 0.242498 5.55556 RBM34
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-040718-77 0.128951 3.81356 RBM34
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-040718-77 0.294151 4.96689 RBM34
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-040718-77 0.249337 5.02513 RBM34
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-040718-77 0.174774 4.21687 RBM34
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-040718-77 0.114667 2.58065 RBM34
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-040718-77 0.249559 6.79612 RBM34
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-040718-77 0.0288545 0.847458 RBM34
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-040718-77 0.155727 3.33333 RBM34
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-040718-77 0.446087 20.1923 RBM34
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-040718-77 0.444445 8.47458 RBM34
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-040718-77 0.11875 2.48447 RBM34
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-040718-77 0.164868 2.83883 RBM34
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-040718-77 0.108906 3.22581 RBM34
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-040718-77 0.0668486 1.2363 rbm34
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-040718-77 0.0587968 1.33843 rbm34
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-040718-77 0.0662954 1.2203 rbm34
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-040718-77 0.0677425 1.28388 rbm34
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-040718-77 0.0384043 0.805369 rbm34
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-040718-77 0.0636994 1.47275 rbm34
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-040718-77 0.10665 3.32363 rbm34
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-040718-77 0.0711671 1.85185 rbm34
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-040718-77 0.072697 1.82679 rbm34
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-040718-77 0.0473674 1.12465 rbm34
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-040718-77 0.0670418 1.64779 rbm34
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-040718-77 0.0455559 0.781125 rbm34
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-040718-77 0.0293412 0.852878 rbm34
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-040718-77 0.0619418 2.2096 rbm34
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-040718-77 0.0516793 1.59541 rbm34
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-040718-77 0.0773113 2.08605 rbm34
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-040718-77 0.0241912 0.868307 rbm34
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-040718-77 0.069814 1.04094 rbm34
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-040718-77 0.0375666 0.982175 rbm34
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-040718-77 0.0477123 1.02778 rbm34
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-040718-77 0.0894151 2.13115 rbm34
id 31018142 Brain merged 32 Markers Im ZDB-GENE-040718-77 0.218609 6.38298 rbm34
id 31018142 Brain merged 32 Markers NN_7 ZDB-GENE-040718-77 0.868794 15.3846 rbm34
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-040718-77 0.255395 10.1449 rbm34
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-040718-77 0.0634727 2.63158 rbm34
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-040718-77 0.0663177 4.16667 rbm34
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-040718-77 0.0682474 3.61446 rbm34
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-040718-77 0.247307 4.7619 rbm34
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-040718-77 0.314244 8.69565 rbm34
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-040718-77 0.0958018 2.98507 rbm34
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-040718-77 0.137684 7.36196 rbm34
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-040718-77 0.226473 12.9032 rbm34
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-040718-77 0.0861896 2.22222 rbm34
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-040718-77 0.155346 8.33333 rbm34
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-040718-77 0.108403 2.77778 rbm34
id 31018142 Brain AB42 33 Markers PC_7 ZDB-GENE-040718-77 0.658182 33.3333 rbm34
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-040718-77 0.341337 5.88235 rbm34
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-040718-77 0.185473 4.87805 rbm34
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-040718-77 0.262034 11.7647 rbm34
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-040718-77 0.116182 6 rbm34
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-040718-77 0.106826 5.95238 rbm34
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-040718-77 0.0884236 5.55556 rbm34
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-040718-77 0.0861665 4.54545 rbm34
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-040718-77 0.269657 5.88235 rbm34
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-040718-77 0.120005 10 rbm34
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-040718-77 0.218553 13.0435 rbm34
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-040718-77 0.18069 5 rbm34
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-040718-77 0.14917 4.38596 rbm34
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-040718-77 0.0400033 1.79641 rbm34
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-040718-77 0.149743 11.7647 rbm34
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-040718-77 0.0342244 1.88679 rbm34
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-040718-77 0.111416 4.7619 rbm34
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-040718-77 0.100771 2.92398 rbm34
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-040718-77 0.266145 9.7561 rbm34
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-040718-77 0.131822 5.73248 rbm34
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-040718-77 0.0571451 4.7619 rbm34
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-040718-77 0.0873423 4.73934 rbm34
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-040718-77 0.157964 8 rbm34
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-040718-77 0.0314222 1.72414 rbm34
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-040718-77 0.417625 10.5263 rbm34
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-040718-77 0.228149 5.88235 rbm34
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-040718-77 0.132892 7.31707 rbm34
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-040718-77 0.11427 5.45455 rbm34
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-040718-77 0.0432833 1.92308 rbm34
id 31018142 Brain IL4 34 Markers NN_7 ZDB-GENE-040718-77 1.1558 25 rbm34
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-040718-77 0.115182 5.17241 rbm34
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-040718-77 0.238452 8.69565 rbm34
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-040718-77 0.187488 7.8125 rbm34
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-040718-77 0.0725558 4 rbm34
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-040718-77 0.294046 13.6364 rbm34
id 31018142 Brain PBS 35 Markers NN_7 ZDB-GENE-040718-77 0.833889 12.5 rbm34