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Gene:
  • ppp1caa
  • 407980
  • ZDB-GENE-040516-3

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,34,35) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:106
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-040516-3 1.29216 34.3042 PPP1CAA
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-040516-3 1.52475 26.6484 PPP1CAA
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-040516-3 1.20178 25.4237 PPP1CAA
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-040516-3 1.59266 30 PPP1CAA
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-040516-3 1.26593 52.8846 PPP1CAA
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-040516-3 0.77424 15.2542 PPP1CAA
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-040516-3 1.16612 22.9814 PPP1CAA
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-040516-3 1.74992 29.0323 PPP1CAA
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-040516-3 1.14142 22.6131 PPP1CAA
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-040516-3 1.27965 25.1613 PPP1CAA
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-040516-3 1.21292 28.626 PPP1CAA
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-040516-3 1.61151 38.8889 PPP1CAA
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-040516-3 1.64148 35.1695 PPP1CAA
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-040516-3 1.3839 24.1722 PPP1CAA
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-040516-3 1.19047 24.0964 PPP1CAA
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-040516-3 0.28438 8.82353 PPP1CAA
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-040516-3 0.918772 18.4594 ppp1caa
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-040516-3 0.845277 18.0065 ppp1caa
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-040516-3 0.898348 22.1111 ppp1caa
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-040516-3 0.867582 22.2131 ppp1caa
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-040516-3 1.0574 22.1748 ppp1caa
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-040516-3 0.588098 20.4545 ppp1caa
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-040516-3 0.58734 17.1027 ppp1caa
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-040516-3 0.660924 20.2086 ppp1caa
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-040516-3 1.06214 22.8654 ppp1caa
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-040516-3 0.790329 15.5576 ppp1caa
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-040516-3 0.878304 17.0132 ppp1caa
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-040516-3 1.34325 33.1335 ppp1caa
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-040516-3 0.528804 14.9691 ppp1caa
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-040516-3 0.704083 19.6549 ppp1caa
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-040516-3 1.0043 21.3182 ppp1caa
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-040516-3 0.691376 16.6348 ppp1caa
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-040516-3 0.808757 17.7264 ppp1caa
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-040516-3 0.67139 12.6961 ppp1caa
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-040516-3 1.09737 19.396 ppp1caa
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-040516-3 1.03979 22.8277 ppp1caa
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-040516-3 1.10552 17.7905 ppp1caa
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-040516-3 0.41638 11.9048 ppp1caa
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-040516-3 1.45966 47.619 ppp1caa
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-040516-3 0.443958 22.293 ppp1caa
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-040516-3 0.390578 17.7914 ppp1caa
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-040516-3 0.199695 9.95261 ppp1caa
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-040516-3 0.838018 33.3333 ppp1caa
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-040516-3 0.574706 15 ppp1caa
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-040516-3 0.204498 5.55556 ppp1caa
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-040516-3 0.415031 9.58084 ppp1caa
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-040516-3 0.757795 18.4211 ppp1caa
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-040516-3 0.298635 6.06061 ppp1caa
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-040516-3 1.75099 41.1765 ppp1caa
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-040516-3 0.455208 11.7647 ppp1caa
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-040516-3 0.376739 13.0435 ppp1caa
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-040516-3 0.34053 16.6667 ppp1caa
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-040516-3 0.60441 17.3913 ppp1caa
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-040516-3 0.835088 33.3333 ppp1caa
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-040516-3 0.050315 2.27273 ppp1caa
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-040516-3 0.761642 21.7391 ppp1caa
id 31018142 Brain AB42 33 Markers PC_7 ZDB-GENE-040516-3 0.901891 33.3333 ppp1caa
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-040516-3 0.563054 11.6883 ppp1caa
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-040516-3 0.324571 5.71429 ppp1caa
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-040516-3 0.656997 13.3333 ppp1caa
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-040516-3 0.248308 6.25 ppp1caa
id 31018142 Brain IL4 34 Markers PC_6 ZDB-GENE-040516-3 3.6731 100 ppp1caa
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-040516-3 1.63741 30 ppp1caa
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-040516-3 0.432722 17.0732 ppp1caa
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-040516-3 0.295146 6.06061 ppp1caa
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-040516-3 0.180875 5.76923 ppp1caa
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-040516-3 0.310504 8.62069 ppp1caa
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-040516-3 0.846371 21.0526 ppp1caa
id 31018142 Brain PBS 35 Markers OPC_OD_2 ZDB-GENE-040516-3 0.279408 20 ppp1caa
id 31018142 Brain IL4 34 Markers NN_5 ZDB-GENE-040516-3 1.09409 20 ppp1caa
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-040516-3 0.30084 11.7647 ppp1caa
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-040516-3 0.533105 12.9353 ppp1caa
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-040516-3 0.410237 9.94152 ppp1caa
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-040516-3 1.22122 35.4839 ppp1caa
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-040516-3 0.151185 2.5641 ppp1caa
id 31018142 Brain merged 32 Markers Im ZDB-GENE-040516-3 1.07828 34.0426 ppp1caa
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-040516-3 0.523674 28.5714 ppp1caa
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-040516-3 0.562208 20.2899 ppp1caa
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-040516-3 0.380959 16 ppp1caa
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-040516-3 0.92521 35.4167 ppp1caa
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-040516-3 0.320659 18.4211 ppp1caa
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-040516-3 0.472148 13.2075 ppp1caa
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-040516-3 0.209401 9.63855 ppp1caa
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-040516-3 0.407237 12.069 ppp1caa
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-040516-3 0.428089 20 ppp1caa
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-040516-3 0.421159 7.14286 ppp1caa
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-040516-3 1.65122 36.3636 ppp1caa
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-040516-3 0.46201 28.5714 ppp1caa
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-040516-3 0.853694 31.8182 ppp1caa
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-040516-3 0.588685 24.3902 ppp1caa
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-040516-3 0.483419 23.6364 ppp1caa
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-040516-3 0.574717 33.3333 ppp1caa
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-040516-3 0.830999 14.6341 ppp1caa
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-040516-3 0.0698446 4 ppp1caa
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-040516-3 0.133833 6.25 ppp1caa
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-040516-3 1.24582 42.8571 ppp1caa
id 31018142 Brain PBS 35 Markers PC_8 ZDB-GENE-040516-3 0.878788 50 ppp1caa
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-040516-3 0.173052 5.55556 ppp1caa
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-040516-3 1.18119 34.7826 ppp1caa
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-040516-3 0.510514 14.7059 ppp1caa
id 31018142 Brain PBS 35 Markers Im ZDB-GENE-040516-3 0.56361 28.5714 ppp1caa
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-040516-3 0.502859 19.6078 ppp1caa
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-040516-3 0.424793 20 ppp1caa
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-040516-3 0.268351 14.2857 ppp1caa
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-040516-3 0.411263 20 ppp1caa
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-040516-3 0.483255 23.4375 ppp1caa