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Gene:
  • mynn
  • 327167
  • ZDB-GENE-030131-5378

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(33,34,35,32) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:91
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-030131-5378 0.0643007 1.69492 MYNN
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-030131-5378 0.336361 6.95364 MYNN
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-030131-5378 0.241341 5.52764 MYNN
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-030131-5378 0.103186 2.40964 MYNN
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-030131-5378 0.167883 4.19355 MYNN
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-030131-5378 0.087509 2.94118 MYNN
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-030131-5378 0.11651 3.24427 MYNN
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-030131-5378 0.161806 4.0404 MYNN
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-030131-5378 0.22158 3.38983 MYNN
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-030131-5378 0.215592 6.79612 MYNN
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-030131-5378 0.128465 3.72671 MYNN
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-030131-5378 0.180474 3.38828 MYNN
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-030131-5378 0.184121 3.22581 MYNN
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-030131-5378 0.0539253 1.69492 MYNN
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-030131-5378 0.138281 3.33333 MYNN
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-030131-5378 0.212 10.5769 MYNN
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-030131-5378 0.0817619 2.25 mynn
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-030131-5378 0.153636 4.2623 mynn
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-030131-5378 0.146522 2.16802 mynn
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-030131-5378 0.116762 2.55864 mynn
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-030131-5378 0.110951 3.59848 mynn
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-030131-5378 0.08172 2.48883 mynn
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-030131-5378 0.0869395 2.80313 mynn
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-030131-5378 0.0998024 3.18379 mynn
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-030131-5378 0.189167 3.678 mynn
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-030131-5378 0.151616 2.8374 mynn
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-030131-5378 0.116639 3.30882 mynn
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-030131-5378 0.217653 6.27034 mynn
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-030131-5378 0.117412 3.34912 mynn
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-030131-5378 0.16411 2.99906 mynn
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-030131-5378 0.14092 2.88363 mynn
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-030131-5378 0.133428 2.5569 mynn
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-030131-5378 0.123488 2.86807 mynn
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-030131-5378 0.152455 2.44059 mynn
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-030131-5378 0.120725 2.42511 mynn
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-030131-5378 0.168905 3.22148 mynn
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-030131-5378 0.176048 2.20913 mynn
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-030131-5378 0.141055 3.24074 mynn
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-030131-5378 0.0541055 2.77778 mynn
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-030131-5378 0.462899 5.26316 mynn
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-030131-5378 0.0422246 2.77778 mynn
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-030131-5378 0.348533 4.16667 mynn
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-030131-5378 0.213188 14.2857 mynn
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-030131-5378 0.239884 8.82353 mynn
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-030131-5378 0.210715 2.43902 mynn
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-030131-5378 0.230872 3.84615 mynn
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-030131-5378 0.245206 6 mynn
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-030131-5378 0.196323 9.52381 mynn
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-030131-5378 0.302148 12.1951 mynn
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-030131-5378 0.0510955 2.27273 mynn
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-030131-5378 0.314609 21.7391 mynn
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-030131-5378 0.276894 6.06061 mynn
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-030131-5378 0.0816767 5.88235 mynn
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-030131-5378 0.149693 6.52174 mynn
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-030131-5378 0.110041 4 mynn
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-030131-5378 0.0405791 2.08333 mynn
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-030131-5378 0.123416 5.26316 mynn
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-030131-5378 0.0261982 1.88679 mynn
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-030131-5378 0.0614943 2.40964 mynn
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-030131-5378 0.188007 4.47761 mynn
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-030131-5378 0.197273 2.33918 mynn
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-030131-5378 0.475079 25.8065 mynn
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-030131-5378 0.169471 2.5641 mynn
id 31018142 Brain merged 32 Markers Im ZDB-GENE-030131-5378 0.224378 4.25532 mynn
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-030131-5378 0.157533 9.52381 mynn
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-030131-5378 0.191777 6.49351 mynn
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-030131-5378 0.420533 27.2727 mynn
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-030131-5378 0.31211 6.66667 mynn
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-030131-5378 0.275103 10 mynn
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-030131-5378 0.126411 4.7619 mynn
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-030131-5378 0.17641 7.31707 mynn
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-030131-5378 0.116722 5.88235 mynn
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-030131-5378 0.440626 6.66667 mynn
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-030131-5378 0.139322 6.25 mynn
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-030131-5378 0.0746616 3.44828 mynn
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-030131-5378 0.179772 8.69565 mynn
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-030131-5378 0.254835 9.375 mynn
id 31018142 Brain PBS 35 Markers PC_8 ZDB-GENE-030131-5378 0.453968 25 mynn
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-030131-5378 0.542888 8.33333 mynn
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-030131-5378 0.114354 4.19162 mynn
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-030131-5378 0.226176 6.14035 mynn
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-030131-5378 0.141868 3.0303 mynn
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-030131-5378 0.762774 29.4118 mynn
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-030131-5378 0.123634 4.7619 mynn
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-030131-5378 0.0833667 4.7619 mynn
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-030131-5378 0.133753 5.09554 mynn
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-030131-5378 0.138241 4.90798 mynn
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-030131-5378 0.113002 5.21327 mynn
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-030131-5378 0.0804434 3.0303 mynn
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-030131-5378 0.162866 2.5 mynn
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-030131-5378 0.145623 4.44444 mynn