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Gene:
  • kdm4aa
  • 100003413
  • ZDB-GENE-110609-4

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,35,33,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:55
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-110609-4 0.121665 4.53074 KDM4AA
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-110609-4 0.20009 3.93773 KDM4AA
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-110609-4 0.173894 4.23729 KDM4AA
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-110609-4 0.180217 3.84615 KDM4AA
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-110609-4 0.151141 2.98013 KDM4AA
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-110609-4 0.240693 4.81928 KDM4AA
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-110609-4 0.108201 5.76923 KDM4AA
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-110609-4 0.178279 4.52261 KDM4AA
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-110609-4 0.225387 4.19355 KDM4AA
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-110609-4 0.139092 3.24427 KDM4AA
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-110609-4 0.266149 6.35593 KDM4AA
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-110609-4 0.239181 4.96894 KDM4AA
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-110609-4 0.46466 6.45161 KDM4AA
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-110609-4 0.0742461 2.0202 KDM4AA
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-110609-4 0.038657 1.17151 kdm4aa
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-110609-4 0.048172 0.983422 kdm4aa
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-110609-4 0.0354534 1.28452 kdm4aa
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-110609-4 0.0392133 1.47336 kdm4aa
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-110609-4 0.01788 0.925926 kdm4aa
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-110609-4 0.0361652 1.21786 kdm4aa
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-110609-4 0.0344943 0.92688 kdm4aa
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-110609-4 0.0402096 1.14723 kdm4aa
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-110609-4 0.0574288 1.28388 kdm4aa
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-110609-4 0.0423786 0.939597 kdm4aa
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-110609-4 0.0354896 1.03093 kdm4aa
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-110609-4 0.0512992 0.940539 kdm4aa
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-110609-4 0.0730473 2.84091 kdm4aa
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-110609-4 0.0617951 1.66551 kdm4aa
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-110609-4 0.0497424 1.30957 kdm4aa
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-110609-4 0.0462162 1.41667 kdm4aa
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-110609-4 0.101483 3.30882 kdm4aa
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-110609-4 0.0435349 1.47541 kdm4aa
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-110609-4 0.0607701 1.81237 kdm4aa
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-110609-4 0.0245633 0.957243 kdm4aa
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-110609-4 0.0573772 1.82529 kdm4aa
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-110609-4 0.0194437 0.868307 kdm4aa
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-110609-4 0.024448 0.724638 kdm4aa
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-110609-4 0.0750238 2.43902 kdm4aa
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-110609-4 0.0632045 2.38095 kdm4aa
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-110609-4 0.0589136 4.34783 kdm4aa
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-110609-4 0.0488186 1.11111 kdm4aa
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-110609-4 0.0822883 2.43902 kdm4aa
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-110609-4 0.0880065 2.94118 kdm4aa
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-110609-4 0.0218551 1.6129 kdm4aa
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-110609-4 0.252845 2.85714 kdm4aa
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-110609-4 0.14481 6.25 kdm4aa
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-110609-4 0.0438639 4.16667 kdm4aa
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-110609-4 0.0191703 1.19048 kdm4aa
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-110609-4 0.0377635 1.84049 kdm4aa
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-110609-4 0.133142 3.0303 kdm4aa
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-110609-4 0.017363 1.20482 kdm4aa
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-110609-4 0.0584852 5.55556 kdm4aa
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-110609-4 0.0440276 0.497512 kdm4aa
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-110609-4 0.0427704 2.77778 kdm4aa
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-110609-4 0.0144618 0.947867 kdm4aa