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Gene:
  • tpra
  • 571089
  • ZDB-GENE-081104-2

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:83
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-081104-2 0.102089 2.01005 TPRA
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-081104-2 0.195976 4.83871 TPRA
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-081104-2 0.276709 8.05085 TPRA
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-081104-2 0.194549 3.97351 TPRA
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-081104-2 0.293179 6.62651 TPRA
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-081104-2 0.33816 8.82353 TPRA
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-081104-2 0.185318 5.34351 TPRA
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-081104-2 0.141905 5.05051 TPRA
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-081104-2 0.26673 7.76699 TPRA
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-081104-2 0.160487 3.47985 TPRA
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-081104-2 0.0725587 2.54237 TPRA
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-081104-2 0.287152 10.5769 TPRA
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-081104-2 0.486386 8.47458 TPRA
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-081104-2 0.252458 5.59006 TPRA
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-081104-2 0.329775 6.45161 TPRA
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-081104-2 0.232353 4.87179 TPRA
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-081104-2 0.254966 4.63087 tpra
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-081104-2 0.205556 4.12371 tpra
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-081104-2 0.242426 7.8465 tpra
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-081104-2 0.228452 5.8642 tpra
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-081104-2 0.198222 5.2774 tpra
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-081104-2 0.207054 3.70752 tpra
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-081104-2 0.180355 3.28744 tpra
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-081104-2 0.24411 4.27024 tpra
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-081104-2 0.195144 3.85356 tpra
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-081104-2 0.154236 2.1398 tpra
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-081104-2 0.156815 2.47091 tpra
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-081104-2 0.165182 5.08475 tpra
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-081104-2 0.148159 3.76266 tpra
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-081104-2 0.136279 3.19223 tpra
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-081104-2 0.146492 3.09203 tpra
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-081104-2 0.161122 4.27778 tpra
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-081104-2 0.180917 5 tpra
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-081104-2 0.116286 2.34542 tpra
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-081104-2 0.156228 6.12374 tpra
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-081104-2 0.125947 3.70134 tpra
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-081104-2 0.151101 2.90534 tpra
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-081104-2 0.0670302 3.62319 tpra
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-081104-2 0.0229371 2.63158 tpra
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-081104-2 0.0690309 4.16667 tpra
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-081104-2 0.0527129 2.43902 tpra
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-081104-2 0.206955 3.77358 tpra
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-081104-2 0.0920412 5.55556 tpra
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-081104-2 0.0405648 1.16959 tpra
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-081104-2 0.293167 11.7647 tpra
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-081104-2 0.0294469 1.91083 tpra
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-081104-2 0.17325 2.5641 tpra
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-081104-2 0.014827 0.947867 tpra
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-081104-2 0.104963 3.33333 tpra
id 31018142 Brain AB42 33 Markers NN_7 ZDB-GENE-081104-2 6.5703 100 tpra
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-081104-2 0.291381 3.84615 tpra
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-081104-2 0.0707579 2.43902 tpra
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-081104-2 0.0270072 1.72414 tpra
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-081104-2 0.0240356 2 tpra
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-081104-2 0.494731 5.88235 tpra
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-081104-2 0.288323 9.09091 tpra
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-081104-2 0.200418 6.06061 tpra
id 31018142 Brain IL4 34 Markers NN_6 ZDB-GENE-081104-2 0.706614 12.5 tpra
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-081104-2 0.204052 14.2857 tpra
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-081104-2 0.0718938 2.94118 tpra
id 31018142 Brain merged 32 Markers Im ZDB-GENE-081104-2 0.204852 4.25532 tpra
id 31018142 Brain merged 32 Markers NN_7 ZDB-GENE-081104-2 0.861039 15.3846 tpra
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-081104-2 0.0241104 1.1976 tpra
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-081104-2 0.0376927 2.40964 tpra
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-081104-2 0.1713 3.0303 tpra
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-081104-2 0.0319484 1.2987 tpra
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-081104-2 0.147763 5.95238 tpra
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-081104-2 0.102328 4 tpra
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-081104-2 0.0753821 0.995025 tpra
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-081104-2 0.0146315 1.22699 tpra
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-081104-2 0.160743 8.06452 tpra
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-081104-2 0.0680175 4.7619 tpra
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-081104-2 0.0270281 1.81818 tpra
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-081104-2 0.0788521 5.88235 tpra
id 31018142 Brain IL4 34 Markers NN_7 ZDB-GENE-081104-2 1.1558 25 tpra
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-081104-2 0.0353907 1.5625 tpra
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-081104-2 0.0666844 2.17391 tpra
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-081104-2 0.157521 13.0435 tpra
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-081104-2 0.506739 10.5263 tpra
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-081104-2 0.0164327 1.38889 tpra
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-081104-2 0.0560488 1.38889 tpra
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-081104-2 0.0833194 2.94118 tpra
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-081104-2 0.45045 6.66667 tpra