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Gene:
  • ankef1a
  • 566413
  • ZDB-GENE-041001-196

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,34,35) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:26
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-041001-196 0.0258407 0.671141 ankef1a
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-041001-196 0.0483555 1.03093 ankef1a
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-041001-196 0.0295276 1.25064 ankef1a
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-041001-196 0.0276884 1.08254 ankef1a
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-041001-196 0.0334834 0.890347 ankef1a
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-041001-196 0.015933 0.61792 ankef1a
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-041001-196 0.0409847 0.941276 ankef1a
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-041001-196 0.0353331 1.01976 ankef1a
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-041001-196 0.0395388 1.09184 ankef1a
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-041001-196 0.0231333 0.570613 ankef1a
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-041001-196 0.033331 1.08025 ankef1a
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-041001-196 0.0295819 1.1734 ankef1a
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-041001-196 0.0249071 0.723589 ankef1a
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-041001-196 0.0299576 0.763359 ankef1a
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-041001-196 0.0198053 0.618407 ankef1a
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-041001-196 0.0216028 0.75 ankef1a
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-041001-196 0.0431265 1.88525 ankef1a
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-041001-196 0.0228803 0.557947 ankef1a
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-041001-196 0.0365468 0.959488 ankef1a
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-041001-196 0.0210764 1.26263 ankef1a
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-041001-196 0.0359644 1.21251 ankef1a
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-041001-196 0.0382068 1.10294 ankef1a
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-041001-196 0.0115871 0.636943 ankef1a
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-041001-196 0.287461 20 ankef1a
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-041001-196 0.136886 9.52381 ankef1a
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-041001-196 0.0284246 1.5625 ankef1a