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Gene:
  • si:ch73-144d13.7
  • 555336
  • ZDB-GENE-131127-29

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish


Single Cell Gene Data Details


Rows:21
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-131127-29 0.00397634 0.0915751 SI:CH73-144D13.7
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-131127-29 0.00963653 0.50505 SI:CH73-144D13.7
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-131127-29 0.00838297 0.30896 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-131127-29 0.00555193 0.111589 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-131127-29 0.0170084 0.446144 si:ch73-144d13.7
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-131127-29 0.00206693 0.126263 si:ch73-144d13.7
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-131127-29 0.0050957 0.144718 si:ch73-144d13.7
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-131127-29 0.00696412 0.260756 si:ch73-144d13.7
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-131127-29 0.00421714 0.109131 si:ch73-144d13.7
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-131127-29 0.00375724 0.0693962 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-131127-29 0.00444743 0.194444 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-131127-29 0.00392021 0.236806 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-131127-29 0.00733703 0.140581 si:ch73-144d13.7
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-131127-29 0.0187076 0.533049 si:ch73-144d13.7
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-131127-29 0.00481326 0.0983422 si:ch73-144d13.7
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-131127-29 0.00554424 0.142653 si:ch73-144d13.7
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-131127-29 0.00171775 0.128452 si:ch73-144d13.7
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-131127-29 0.0072621 0.147275 si:ch73-144d13.7
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-131127-29 0.00702033 0.134228 si:ch73-144d13.7
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-131127-29 0.0105871 0.462963 si:ch73-144d13.7
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-131127-29 0.00317218 0.154189 si:ch73-144d13.7