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Gene:
  • pdzd11
  • 405893
  • ZDB-GENE-040426-2544

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,34,35) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:109
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-040426-2544 1.5766 30.5085 PDZD11
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-040426-2544 1.46355 27.9503 PDZD11
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-040426-2544 0.849316 16.129 PDZD11
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-040426-2544 1.63469 29.661 PDZD11
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-040426-2544 1.9102 37.4359 PDZD11
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-040426-2544 2.07721 63.4615 PDZD11
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-040426-2544 1.76969 33.6683 PDZD11
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-040426-2544 0.738309 20.339 PDZD11
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-040426-2544 1.97552 34.7682 PDZD11
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-040426-2544 2.28213 43.3735 PDZD11
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-040426-2544 2.09764 37.4194 PDZD11
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-040426-2544 0.878535 26.4706 PDZD11
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-040426-2544 2.73772 56.1069 PDZD11
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-040426-2544 1.6634 39.899 PDZD11
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-040426-2544 2.58902 62.4595 PDZD11
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-040426-2544 1.67789 29.9451 PDZD11
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-040426-2544 0.564747 10.604 pdzd11
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-040426-2544 0.667589 13.1075 pdzd11
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-040426-2544 0.476926 12.8491 pdzd11
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-040426-2544 0.796512 20.9877 pdzd11
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-040426-2544 0.740651 19.8579 pdzd11
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-040426-2544 0.543977 10.5904 pdzd11
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-040426-2544 0.62385 13.2853 pdzd11
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-040426-2544 0.529104 9.37061 pdzd11
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-040426-2544 0.449489 11.9184 pdzd11
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-040426-2544 0.520199 10.2119 pdzd11
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-040426-2544 0.675414 11.5549 pdzd11
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-040426-2544 0.509237 9.43789 pdzd11
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-040426-2544 0.384021 8.94871 pdzd11
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-040426-2544 0.532083 12.5278 pdzd11
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-040426-2544 0.606954 16.5574 pdzd11
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-040426-2544 0.529294 8.84744 pdzd11
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-040426-2544 0.650708 15.032 pdzd11
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-040426-2544 0.64186 21.9697 pdzd11
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-040426-2544 0.497522 13.0185 pdzd11
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-040426-2544 0.642115 17.7966 pdzd11
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-040426-2544 0.546207 13.6035 pdzd11
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-040426-2544 0.378848 9.09091 pdzd11
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-040426-2544 0.0921658 5.26316 pdzd11
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-040426-2544 1.10375 27.381 pdzd11
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-040426-2544 0.474467 21.6867 pdzd11
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-040426-2544 0.278959 15.2866 pdzd11
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-040426-2544 0.460561 19.6319 pdzd11
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-040426-2544 0.412083 19.4313 pdzd11
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-040426-2544 0.783303 21.2121 pdzd11
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-040426-2544 0.808636 20 pdzd11
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-040426-2544 0.251368 6.66667 pdzd11
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-040426-2544 0.680755 16.7665 pdzd11
id 31018142 Brain merged 32 Markers NN_7 ZDB-GENE-040426-2544 2.1911 15.3846 pdzd11
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-040426-2544 0.801804 24.1379 pdzd11
id 31018142 Brain IL4 34 Markers NN_7 ZDB-GENE-040426-2544 6.37213 25 pdzd11
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-040426-2544 0.478423 7.14286 pdzd11
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-040426-2544 0.328483 17.3913 pdzd11
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-040426-2544 0.0833667 4.7619 pdzd11
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-040426-2544 0.41724 28.5714 pdzd11
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-040426-2544 0.66451 24.3902 pdzd11
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-040426-2544 0.551424 29.0909 pdzd11
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-040426-2544 0.398644 25 pdzd11
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-040426-2544 0.716545 17.0732 pdzd11
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-040426-2544 0.71152 20 pdzd11
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-040426-2544 1.99943 37.5 pdzd11
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-040426-2544 0.992877 29.4118 pdzd11
id 31018142 Brain PBS 35 Markers PC_7 ZDB-GENE-040426-2544 0.18948 11.1111 pdzd11
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-040426-2544 1.10922 23.0769 pdzd11
id 31018142 Brain PBS 35 Markers NN_6 ZDB-GENE-040426-2544 0.440335 10 pdzd11
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-040426-2544 0.44933 18.1818 pdzd11
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-040426-2544 0.692254 13.7931 pdzd11
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-040426-2544 0.401123 10 pdzd11
id 31018142 Brain PBS 35 Markers OPC_OD_2 ZDB-GENE-040426-2544 1.25451 20 pdzd11
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-040426-2544 0.946743 28.5714 pdzd11
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-040426-2544 1.34038 35.2941 pdzd11
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-040426-2544 0.876761 16.6667 pdzd11
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-040426-2544 0.622396 34.7826 pdzd11
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-040426-2544 0.807458 22.6415 pdzd11
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-040426-2544 0.451196 23.5294 pdzd11
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-040426-2544 0.935938 23.3831 pdzd11
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-040426-2544 0.812923 19.2982 pdzd11
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-040426-2544 0.65325 35.4839 pdzd11
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-040426-2544 0.52065 7.69231 pdzd11
id 31018142 Brain merged 32 Markers Im ZDB-GENE-040426-2544 0.0372489 2.12766 pdzd11
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-040426-2544 0.31202 14.2857 pdzd11
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-040426-2544 0.498596 21.0145 pdzd11
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-040426-2544 0.228662 8 pdzd11
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-040426-2544 0.298983 18.75 pdzd11
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-040426-2544 0.959884 27.193 pdzd11
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-040426-2544 0.793137 20.5882 pdzd11
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-040426-2544 0.475227 8.69565 pdzd11
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-040426-2544 0.494097 20.8333 pdzd11
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-040426-2544 0.340259 16 pdzd11
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-040426-2544 0.616632 19.0476 pdzd11
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-040426-2544 0.201886 9.09091 pdzd11
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-040426-2544 0.670422 21.7391 pdzd11
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-040426-2544 0.133591 5.88235 pdzd11
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-040426-2544 0.638401 19.4805 pdzd11
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-040426-2544 0.600498 11.4286 pdzd11
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-040426-2544 0.224997 6.66667 pdzd11
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-040426-2544 0.761828 15.625 pdzd11
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-040426-2544 0.548377 21.9512 pdzd11
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-040426-2544 0.66643 16.6667 pdzd11
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-040426-2544 0.907163 13.3333 pdzd11
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-040426-2544 0.21669 6.06061 pdzd11
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-040426-2544 0.518651 21.5686 pdzd11
id 31018142 Brain PBS 35 Markers NN_7 ZDB-GENE-040426-2544 0.374476 12.5 pdzd11
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-040426-2544 0.84164 45.4545 pdzd11
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-040426-2544 0.33093 17.8571 pdzd11
id 31018142 Brain IL4 34 Markers NN_5 ZDB-GENE-040426-2544 1.78571 20 pdzd11
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-040426-2544 0.155718 9.375 pdzd11
id 31018142 Brain IL4 34 Markers NN_6 ZDB-GENE-040426-2544 0.590458 12.5 pdzd11
id 31018142 Brain PBS 35 Markers PC_8 ZDB-GENE-040426-2544 0.907935 25 pdzd11