Gene Results Dot Plot

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Gene:
  • synj1
  • 337236
  • ZDB-GENE-030131-9180

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(33,34,35,32) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:99
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-030131-9180 0.361718 6.77966 SYNJ1
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-030131-9180 0.26542 8.73786 SYNJ1
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-030131-9180 0.294003 6.8323 SYNJ1
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-030131-9180 0.557214 9.89011 SYNJ1
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-030131-9180 0.263608 5.9322 SYNJ1
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-030131-9180 0.310127 6.66667 SYNJ1
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-030131-9180 0.132366 7.69231 SYNJ1
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-030131-9180 0.528786 9.67742 SYNJ1
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-030131-9180 0.366119 9.32203 SYNJ1
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-030131-9180 0.281655 6.29139 SYNJ1
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-030131-9180 0.506738 11.0553 SYNJ1
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-030131-9180 0.685553 14.8387 SYNJ1
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-030131-9180 0.325919 8.96947 SYNJ1
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-030131-9180 0.260248 6.06061 SYNJ1
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-030131-9180 0.275758 5.42169 SYNJ1
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-030131-9180 0.45236 11.7647 SYNJ1
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-030131-9180 0.770124 13.7405 synj1
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-030131-9180 3.25853 50.6944 synj1
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-030131-9180 1.99642 24.9482 synj1
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-030131-9180 2.31842 49.3056 synj1
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-030131-9180 1.96267 37.7445 synj1
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-030131-9180 1.29867 23.7541 synj1
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-030131-9180 1.38153 29.5082 synj1
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-030131-9180 1.17574 23.3475 synj1
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-030131-9180 0.489027 10.7211 synj1
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-030131-9180 1.08842 21.7077 synj1
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-030131-9180 1.08253 19.396 synj1
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-030131-9180 0.339693 9.28559 synj1
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-030131-9180 1.15346 21.6495 synj1
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-030131-9180 1.57174 23.6302 synj1
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-030131-9180 1.48954 25.562 synj1
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-030131-9180 0.973663 20.324 synj1
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-030131-9180 2.18561 41.5123 synj1
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-030131-9180 1.98292 40.8999 synj1
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-030131-9180 0.919226 18.6406 synj1
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-030131-9180 1.43121 27.9159 synj1
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-030131-9180 1.47428 22.9672 synj1
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-030131-9180 0.911079 14.2857 synj1
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-030131-9180 0.179888 10 synj1
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-030131-9180 0.0827617 5.45455 synj1
id 31018142 Brain IL4 34 Markers NN_6 ZDB-GENE-030131-9180 0.789141 12.5 synj1
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-030131-9180 0.0527129 2.43902 synj1
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-030131-9180 0.844212 12.1951 synj1
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-030131-9180 0.0376138 2.77778 synj1
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-030131-9180 1.26765 25 synj1
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-030131-9180 0.411763 16 synj1
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-030131-9180 0.0666844 2.17391 synj1
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-030131-9180 0.229507 8.62069 synj1
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-030131-9180 0.13191 4.54545 synj1
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-030131-9180 0.884166 23.5294 synj1
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-030131-9180 0.485043 10.9453 synj1
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-030131-9180 0.456704 9.35672 synj1
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-030131-9180 0.140578 8.69565 synj1
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-030131-9180 0.112095 8.06452 synj1
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-030131-9180 0.205292 2.5641 synj1
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-030131-9180 0.419059 8.33333 synj1
id 31018142 Brain PBS 35 Markers Im ZDB-GENE-030131-9180 0.202951 14.2857 synj1
id 31018142 Brain merged 32 Markers Im ZDB-GENE-030131-9180 0.271749 8.51064 synj1
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-030131-9180 0.303693 4.7619 synj1
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-030131-9180 0.53376 6.66667 synj1
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-030131-9180 0.0812838 4.34783 synj1
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-030131-9180 0.140168 8 synj1
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-030131-9180 0.117421 7.84314 synj1
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-030131-9180 0.200701 8.33333 synj1
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-030131-9180 0.141546 7.89474 synj1
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-030131-9180 0.11157 7.14286 synj1
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-030131-9180 0.602947 16.9811 synj1
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-030131-9180 0.181118 8.43373 synj1
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-030131-9180 0.140457 2.94118 synj1
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-030131-9180 0.223249 14.2857 synj1
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-030131-9180 1.80956 39.1304 synj1
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-030131-9180 0.385687 8.57143 synj1
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-030131-9180 0.41235 12.987 synj1
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-030131-9180 1.19352 18.75 synj1
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-030131-9180 0.993855 20 synj1
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-030131-9180 0.0605593 4 synj1
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-030131-9180 0.665584 20.5882 synj1
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-030131-9180 0.602845 9.09091 synj1
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-030131-9180 0.513364 19.0476 synj1
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-030131-9180 0.254998 5.26316 synj1
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-030131-9180 0.139161 7.8125 synj1
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-030131-9180 0.799234 22.619 synj1
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-030131-9180 0.309836 9.52381 synj1
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-030131-9180 0.405835 20 synj1
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-030131-9180 0.119981 7.00637 synj1
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-030131-9180 0.0185765 1.22699 synj1
id 31018142 Brain IL4 34 Markers PC_6 ZDB-GENE-030131-9180 2.1106 50 synj1
id 31018142 Brain PBS 35 Markers PC_7 ZDB-GENE-030131-9180 0.18948 11.1111 synj1
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-030131-9180 0.143169 7.109 synj1
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-030131-9180 0.374042 15.1515 synj1
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-030131-9180 0.71245 23.5294 synj1
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-030131-9180 1.04049 22.5 synj1
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-030131-9180 0.0530617 1.11111 synj1
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-030131-9180 0.481852 9.61539 synj1
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-030131-9180 0.855672 18.5629 synj1
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-030131-9180 0.517002 12.2807 synj1
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-030131-9180 1.25782 25.8621 synj1
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-030131-9180 0.643059 12.1212 synj1
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-030131-9180 0.218623 17.6471 synj1