Gene Results Dot Plot

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Gene:
  • jupa
  • 30415
  • ZDB-GENE-991207-22

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:83
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-991207-22 0.0525506 1.00733 JUPA
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-991207-22 0.0519625 1.94175 JUPA
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-991207-22 0.0857495 1.69492 JUPA
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-991207-22 0.0350864 0.769231 JUPA
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-991207-22 0.0921389 4.80769 JUPA
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-991207-22 0.158624 2.31788 JUPA
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-991207-22 0.20139 4.81928 JUPA
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-991207-22 0.0351712 1.00503 JUPA
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-991207-22 0.6201 9.67742 JUPA
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-991207-22 0.128457 2.90323 JUPA
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-991207-22 0.039411 0.763359 JUPA
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-991207-22 0.288057 9.09091 JUPA
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-991207-22 0.793029 18.2203 JUPA
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-991207-22 0.236429 5.59006 JUPA
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-991207-22 0.405222 6.07621 jupa
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-991207-22 0.125473 2.33212 jupa
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-991207-22 0.0861116 2.03952 jupa
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-991207-22 0.168462 3.2113 jupa
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-991207-22 0.108861 2.42511 jupa
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-991207-22 0.200294 3.55705 jupa
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-991207-22 0.1319 2.35641 jupa
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-991207-22 0.658356 13.6885 jupa
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-991207-22 0.209553 4.47531 jupa
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-991207-22 0.108652 3.28146 jupa
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-991207-22 0.220781 5.40984 jupa
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-991207-22 0.336436 4.36793 jupa
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-991207-22 0.273626 5.22388 jupa
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-991207-22 0.0755109 3.0303 jupa
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-991207-22 0.815313 16.4646 jupa
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-991207-22 0.132032 3.78096 jupa
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-991207-22 0.366897 7.09117 jupa
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-991207-22 0.578927 8.67453 jupa
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-991207-22 0.299236 5.20189 jupa
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-991207-22 0.192687 3.77778 jupa
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-991207-22 0.0881732 2.75735 jupa
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-991207-22 0.218749 3.70197 jupa
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-991207-22 0.452506 22.2749 jupa
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-991207-22 0.618459 16 jupa
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-991207-22 0.251013 7.5 jupa
id 31018142 Brain AB42 33 Markers PC_5 ZDB-GENE-991207-22 0.230747 11.7647 jupa
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-991207-22 0.0155251 0.598802 jupa
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-991207-22 0.0869879 9.52381 jupa
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-991207-22 0.0329456 1.88679 jupa
id 31018142 Brain AB42 33 Markers PC_3 ZDB-GENE-991207-22 1.15669 26.8293 jupa
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-991207-22 0.71081 28.8344 jupa
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-991207-22 0.165867 11.1111 jupa
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-991207-22 0.479794 21.6561 jupa
id 31018142 Brain merged 32 Markers PC_8 ZDB-GENE-991207-22 0.385193 19.0476 jupa
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-991207-22 1.04495 21.4286 jupa
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-991207-22 0.154171 2.77778 jupa
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-991207-22 0.162467 8.82353 jupa
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-991207-22 0.439325 13.7255 jupa
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-991207-22 0.473879 21.8182 jupa
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-991207-22 0.379255 18.75 jupa
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-991207-22 0.517014 22 jupa
id 31018142 Brain PBS 35 Markers PC_5 ZDB-GENE-991207-22 0.249992 17.3913 jupa
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-991207-22 0.452411 18.1818 jupa
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-991207-22 0.548875 12.1212 jupa
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-991207-22 0.143423 3.44828 jupa
id 31018142 Brain IL4 34 Markers PC_8 ZDB-GENE-991207-22 0.276319 10 jupa
id 31018142 Brain merged 32 Markers Im ZDB-GENE-991207-22 0.038867 4.25532 jupa
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-991207-22 0.657685 26.3158 jupa
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-991207-22 0.652906 20.2899 jupa
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-991207-22 0.423098 22.8916 jupa
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-991207-22 0.208949 12.5 jupa
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-991207-22 0.436545 13.0435 jupa
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-991207-22 0.113561 2.33918 jupa
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-991207-22 0.0336713 1.2987 jupa
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-991207-22 0.37511 7.69231 jupa
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-991207-22 0.0698446 4 jupa
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-991207-22 0.388786 16.129 jupa
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-991207-22 0.351106 10 jupa
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-991207-22 0.818551 31.9444 jupa
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-991207-22 0.462749 10 jupa
id 31018142 Brain AB42 33 Markers PC_8 ZDB-GENE-991207-22 0.760836 42.8571 jupa
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-991207-22 0.757943 31.7073 jupa
id 31018142 Brain AB42 33 Markers PC_7 ZDB-GENE-991207-22 0.361611 16.6667 jupa
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-991207-22 0.481615 23.8095 jupa
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-991207-22 0.346209 8.69565 jupa
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-991207-22 0.405835 20 jupa
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-991207-22 0.440676 21.7391 jupa
id 31018142 Brain PBS 35 Markers PC_7 ZDB-GENE-991207-22 0.962703 22.2222 jupa
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-991207-22 0.656009 18.1818 jupa