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Gene:

invs
245946
ZDB-GENE-020507-2

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,35,33,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details

Rows:60

id	pubmed_id	tissue type	condition	dataset ID	dataset id	cluster name	Species specific geneid	avg exp	% exp	gene symbol
id	29576475	Habenula	all	53	Markers	Hb09	ZDB-GENE-020507-2	0.0641966	2.26537	INVS
id	29576475	Habenula	all	53	Markers	Hb01	ZDB-GENE-020507-2	0.12354	2.47253	INVS
id	29576475	Habenula	all	53	Markers	Hb08	ZDB-GENE-020507-2	0.0502633	1.52672	INVS
id	29576475	Habenula	all	53	Markers	Hb13	ZDB-GENE-020507-2	0.0498156	2.0202	INVS
id	29576475	Habenula	all	53	Markers	16	ZDB-GENE-020507-2	0.0160139	0.423729	INVS
id	29576475	Habenula	all	53	Markers	Hb05	ZDB-GENE-020507-2	0.285737	6.21118	INVS
id	29576475	Habenula	all	53	Markers	Hb15	ZDB-GENE-020507-2	0.104734	3.22581	INVS
id	29576475	Habenula	all	53	Markers	Hb03	ZDB-GENE-020507-2	0.140767	3.51759	INVS
id	29576475	Habenula	all	53	Markers	Hb04	ZDB-GENE-020507-2	0.212926	3.22581	INVS
id	29576475	Habenula	all	53	Markers	Hb02	ZDB-GENE-020507-2	0.0807609	1.79487	INVS
id	29576475	Habenula	all	53	Markers	Hb10	ZDB-GENE-020507-2	0.224998	11.5385	INVS
id	29576475	Habenula	all	53	Markers	Hb06	ZDB-GENE-020507-2	0.0724302	1.3245	INVS
id	29576475	Habenula	all	53	Markers	Hb07	ZDB-GENE-020507-2	0.0288787	0.60241	INVS
id	29608178	Brain	all	42	Markers	Nascent forebrain neurons	ZDB-GENE-020507-2	0.0276971	0.702905	invs
id	29608178	Brain	all	42	Markers	bnc2+, onecut1+ neurons	ZDB-GENE-020507-2	0.0181646	0.61792	invs
id	29608178	Brain	all	42	Markers	GABAergic optic tectum neurons	ZDB-GENE-020507-2	0.0414487	0.927227	invs
id	29608178	Brain	all	42	Markers	Unclassified neurons	ZDB-GENE-020507-2	0.0498808	1.52964	invs
id	29608178	Brain	all	42	Markers	atf5b+ neurons	ZDB-GENE-020507-2	0.0529003	1.41297	invs
id	29608178	Brain	all	42	Markers	sst3+ neurons	ZDB-GENE-020507-2	0.0555229	1.14123	invs
id	29608178	Brain	all	42	Markers	GABAergic subpallium neurons	ZDB-GENE-020507-2	0.0423937	0.872483	invs
id	29608178	Brain	all	42	Markers	phox2+ hindbrain neurons	ZDB-GENE-020507-2	0.0698761	1.47275	invs
id	29608178	Brain	all	42	Markers	Progenitor cells	ZDB-GENE-020507-2	0.0324414	1.3363	invs
id	29608178	Brain	all	42	Markers	penkb+ neurons	ZDB-GENE-020507-2	0.0398791	1.85185	invs
id	29608178	Brain	all	42	Markers	Ventral forebrain neurons	ZDB-GENE-020507-2	0.0508183	1.79296	invs
id	29608178	Brain	all	42	Markers	fezf1+, otpa+ neurons	ZDB-GENE-020507-2	0.0278435	0.819672	invs
id	29608178	Brain	all	42	Markers	Granule cell neurons	ZDB-GENE-020507-2	0.0319085	0.637653	invs
id	29608178	Brain	all	42	Markers	GABAergic hindbrain neurons	ZDB-GENE-020507-2	0.0419141	1.27932	invs
id	29608178	Brain	all	42	Markers	rtn4rl2b+ eomesa+ pallium neurons	ZDB-GENE-020507-2	0.0357052	1.32576	invs
id	29608178	Brain	all	42	Markers	Radial glia cells (progenitors)	ZDB-GENE-020507-2	0.0466957	1.34014	invs
id	29608178	Brain	all	42	Markers	nefma+ glutamergic neurons (midbrain)	ZDB-GENE-020507-2	0.0511377	1.49935	invs
id	29608178	Brain	all	42	Markers	hmx3a+, hmx2+ neurons	ZDB-GENE-020507-2	0.0301515	1.01302	invs
id	29608178	Brain	all	42	Markers	tfap2b+, barhl2+ midbrain neurons	ZDB-GENE-020507-2	0.0250167	0.55517	invs
id	29608178	Brain	all	42	Markers	tcf7I2+, barhl2+ neurons	ZDB-GENE-020507-2	0.0478535	1.16406	invs
id	29608178	Brain	all	42	Markers	Torus Longitudinalis neurons	ZDB-GENE-020507-2	0.0400825	1.16667	invs
id	29608178	Brain	all	42	Markers	rtn4rl2b+ pallium neurons	ZDB-GENE-020507-2	0.0269824	1.10294	invs
id	31018142	Brain	merged	32	Markers	PC_7	ZDB-GENE-020507-2	0.0788488	4	invs
id	31018142	Brain	PBS	35	Markers	NN_1	ZDB-GENE-020507-2	0.0276066	1.38889	invs
id	31018142	Brain	AB42	33	Markers	PC_3	ZDB-GENE-020507-2	0.0469947	2.43902	invs
id	31018142	Brain	PBS	35	Markers	PC_2	ZDB-GENE-020507-2	0.0279367	1.5625	invs
id	31018142	Brain	merged	32	Markers	PC_2	ZDB-GENE-020507-2	0.0830771	3.82166	invs
id	31018142	Brain	AB42	33	Markers	NN_1	ZDB-GENE-020507-2	0.0339064	1.72414	invs
id	31018142	Brain	merged	32	Markers	PC_3	ZDB-GENE-020507-2	0.0243826	1.44928	invs
id	31018142	Brain	AB42	33	Markers	PC_8	ZDB-GENE-020507-2	0.426376	14.2857	invs
id	31018142	Brain	merged	32	Markers	NN_1	ZDB-GENE-020507-2	0.0231242	1.16959	invs
id	31018142	Brain	IL4	34	Markers	PC_4	ZDB-GENE-020507-2	0.2047	4.34783	invs
id	31018142	Brain	merged	32	Markers	PC_8	ZDB-GENE-020507-2	0.223735	9.52381	invs
id	31018142	Brain	IL4	34	Markers	PC_3	ZDB-GENE-020507-2	0.0312613	2.17391	invs
id	31018142	Brain	AB42	33	Markers	PC_0	ZDB-GENE-020507-2	0.0487077	2.40964	invs
id	31018142	Brain	PBS	35	Markers	PC_0	ZDB-GENE-020507-2	0.0326783	2.38095	invs
id	31018142	Brain	AB42	33	Markers	PC_6	ZDB-GENE-020507-2	0.0991163	5.55556	invs
id	31018142	Brain	PBS	35	Markers	PC_7	ZDB-GENE-020507-2	0.219024	11.1111	invs
id	31018142	Brain	merged	32	Markers	PC_0	ZDB-GENE-020507-2	0.0321693	1.89573	invs
id	31018142	Brain	AB42	33	Markers	PC_1	ZDB-GENE-020507-2	0.0925861	5.55556	invs
id	31018142	Brain	merged	32	Markers	PC_6	ZDB-GENE-020507-2	0.0743372	4.16667	invs
id	31018142	Brain	IL4	34	Markers	PC_2	ZDB-GENE-020507-2	0.204639	9.09091	invs
id	31018142	Brain	merged	32	Markers	PC_1	ZDB-GENE-020507-2	0.0843067	5.52147	invs
id	31018142	Brain	IL4	34	Markers	PC_1	ZDB-GENE-020507-2	0.141516	10	invs
id	31018142	Brain	merged	32	Markers	PC_4	ZDB-GENE-020507-2	0.172517	4.44444	invs
id	31018142	Brain	IL4	34	Markers	PC_8	ZDB-GENE-020507-2	0.17138	10	invs
id	31018142	Brain	PBS	35	Markers	PC_4	ZDB-GENE-020507-2	0.327831	9.09091	invs