Gene Results Dot Plot

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Gene:
  • whrna
  • 100334777
  • ZDB-GENE-091118-27

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(35,34,32,33) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish


Single Cell Gene Data Details


Rows:70
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-091118-27 0.0817973 2.11864 DFNB31A
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-091118-27 0.670349 13.0435 DFNB31A
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-091118-27 0.0346281 1.2945 DFNB31A
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-091118-27 0.16905 5.88235 DFNB31A
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-091118-27 0.0570949 1.28205 DFNB31A
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-091118-27 0.238737 7.06107 DFNB31A
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-091118-27 0.102911 3.0303 DFNB31A
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-091118-27 0.0556251 0.993378 DFNB31A
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-091118-27 0.0412178 1.20482 DFNB31A
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-091118-27 0.506207 9.54774 DFNB31A
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-091118-27 0.0763063 1.93548 DFNB31A
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-091118-27 0.558314 11.2821 DFNB31A
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-091118-27 0.133207 4.80769 DFNB31A
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-091118-27 0.118814 4.84838 dfnb31a
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-091118-27 0.201773 7.40866 dfnb31a
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-091118-27 0.13562 3.84255 dfnb31a
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-091118-27 0.115162 3.60453 dfnb31a
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-091118-27 0.299063 6.89801 dfnb31a
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-091118-27 0.183528 4.81696 dfnb31a
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-091118-27 0.184217 4.22819 dfnb31a
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-091118-27 0.209955 6.03829 dfnb31a
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-091118-27 0.133421 5.09259 dfnb31a
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-091118-27 0.306729 7.64818 dfnb31a
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-091118-27 0.18523 4.2796 dfnb31a
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-091118-27 0.183294 4.30257 dfnb31a
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-091118-27 0.155843 5.13889 dfnb31a
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-091118-27 0.21549 7.37705 dfnb31a
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-091118-27 0.229371 5.0534 dfnb31a
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-091118-27 0.177708 8.52273 dfnb31a
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-091118-27 0.225891 7.69231 dfnb31a
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-091118-27 0.167468 5.09276 dfnb31a
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-091118-27 0.173232 4.59559 dfnb31a
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-091118-27 0.21091 7.46269 dfnb31a
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-091118-27 0.140559 4.78622 dfnb31a
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-091118-27 0.174227 4.92041 dfnb31a
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-091118-27 0.0397725 1.96078 dfnb31a
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-091118-27 0.0666326 3.57143 dfnb31a
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-091118-27 0.0485937 2.27273 dfnb31a
id 31018142 Brain IL4 34 Markers PC_7 ZDB-GENE-091118-27 0.269614 10 dfnb31a
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-091118-27 0.284172 2.94118 dfnb31a
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-091118-27 0.075788 2.92398 dfnb31a
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-091118-27 0.0968636 2.43902 dfnb31a
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-091118-27 0.206616 2.5641 dfnb31a
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-091118-27 0.0758725 2 dfnb31a
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-091118-27 0.0192296 1.27389 dfnb31a
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-091118-27 0.0642461 2.63158 dfnb31a
id 31018142 Brain merged 32 Markers Im ZDB-GENE-091118-27 0.0492286 2.12766 dfnb31a
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-091118-27 0.573418 8.69565 dfnb31a
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-091118-27 0.0471433 2.17391 dfnb31a
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-091118-27 0.0539963 2.94118 dfnb31a
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-091118-27 0.0305564 2.08333 dfnb31a
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-091118-27 0.0837736 5.55556 dfnb31a
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-091118-27 0.537201 6.66667 dfnb31a
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-091118-27 0.104348 3.44828 dfnb31a
id 31018142 Brain PBS 35 Markers PC_2 ZDB-GENE-091118-27 0.0257626 1.5625 dfnb31a
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-091118-27 0.0973344 4.34783 dfnb31a
id 31018142 Brain IL4 34 Markers Im ZDB-GENE-091118-27 0.121776 5.26316 dfnb31a
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-091118-27 0.0186004 1.38889 dfnb31a
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-091118-27 0.0602781 3.06748 dfnb31a
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-091118-27 0.17566 3.125 dfnb31a
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-091118-27 0.0364381 1.49254 dfnb31a
id 31018142 Brain merged 32 Markers PC_7 ZDB-GENE-091118-27 0.107846 4 dfnb31a
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-091118-27 0.056767 2.8436 dfnb31a
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-091118-27 0.0511154 2.40964 dfnb31a
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-091118-27 0.329716 5 dfnb31a
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-091118-27 0.0407418 2.77778 dfnb31a
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-091118-27 0.0699 1.79641 dfnb31a
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-091118-27 0.131881 5.17241 dfnb31a
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-091118-27 0.136877 2.38095 dfnb31a
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-091118-27 0.0249134 1.81818 dfnb31a