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Gene:
Rows:64
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Gene:
- spred3
- 568925
- ZDB-GENE-061207-31
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
datasets(42)
Tissue Type:
- PubMed Id:
29608178
- Treatment Condition : WT
Species : Zebrafish
Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity
datasets(32,33,34,35)
Tissue Type:
- PubMed Id:
31018142
- Treatment Condition : IL-4 treated
Species : Zebrafish
Single Cell Gene Data Details
Rows:64
| id | pubmed_id | tissue type | condition | dataset ID | dataset id | cluster name | cluster description | Species specific geneid | avg exp | % exp | gene symbol |
|---|---|---|---|---|---|---|---|---|---|---|---|
| id | 29608178 | Brain | all | 42 | Markers | nefma+ glutamergic neurons (midbrain) | ZDB-GENE-061207-31 | 0.905713 | 20.9909 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | hmx3a+, hmx2+ neurons | ZDB-GENE-061207-31 | 0.539911 | 13.1693 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | tfap2b+, barhl2+ midbrain neurons | ZDB-GENE-061207-31 | 0.471227 | 8.18876 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | tcf7I2+, barhl2+ neurons | ZDB-GENE-061207-31 | 0.656516 | 12.7683 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Torus Longitudinalis neurons | ZDB-GENE-061207-31 | 0.73661 | 15.6389 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | fezf1+, otpa+ neurons | ZDB-GENE-061207-31 | 0.807886 | 18.1148 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic hindbrain neurons | ZDB-GENE-061207-31 | 0.699588 | 14.6055 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Radial glia cells (progenitors) | ZDB-GENE-061207-31 | 0.098415 | 3.25463 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Nascent forebrain neurons | ZDB-GENE-061207-31 | 0.37688 | 7.07591 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic optic tectum neurons | ZDB-GENE-061207-31 | 0.669361 | 10.93 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | atf5b+ neurons | ZDB-GENE-061207-31 | 0.834596 | 13.2948 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic subpallium neurons | ZDB-GENE-061207-31 | 0.479003 | 8.85906 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | phox2+ hindbrain neurons | ZDB-GENE-061207-31 | 0.496691 | 9.86745 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Progenitor cells | ZDB-GENE-061207-31 | 0.188831 | 5.19102 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | penkb+ neurons | ZDB-GENE-061207-31 | 0.732641 | 16.6667 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Ventral forebrain neurons | ZDB-GENE-061207-31 | 1.21924 | 25.7781 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | bnc2+, onecut1+ neurons | ZDB-GENE-061207-31 | 0.473453 | 8.03296 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Unclassified neurons | ZDB-GENE-061207-31 | 0.719043 | 14.2129 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | sst3+ neurons | ZDB-GENE-061207-31 | 0.868661 | 14.9786 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | Granule cell neurons | ZDB-GENE-061207-31 | 0.822871 | 11.0952 | spred3 | |
| id | 29608178 | Brain | all | 42 | Markers | rtn4rl2b+ eomesa+ pallium neurons | ZDB-GENE-061207-31 | 0.925656 | 23.9268 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | PC_0 | ZDB-GENE-061207-31 | 0.00832046 | 0.473934 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_0 | ZDB-GENE-061207-31 | 0.54711 | 14.0351 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_5 | ZDB-GENE-061207-31 | 0.534692 | 12.5 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_5 | ZDB-GENE-061207-31 | 0.680023 | 17.3913 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_6 | ZDB-GENE-061207-31 | 1.13992 | 21.2121 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_6 | ZDB-GENE-061207-31 | 1.32992 | 26.6667 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_3 | ZDB-GENE-061207-31 | 0.587401 | 17.8571 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_3 | ZDB-GENE-061207-31 | 0.810745 | 23.5294 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | PC_1 | ZDB-GENE-061207-31 | 0.0245891 | 0.613497 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | OPC_OD_1 | ZDB-GENE-061207-31 | 0.478423 | 7.14286 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_0 | ZDB-GENE-061207-31 | 0.482122 | 11.9403 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | OPC_OD_2 | ZDB-GENE-061207-31 | 0.341347 | 12.1212 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_2 | ZDB-GENE-061207-31 | 0.65432 | 9.375 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | OPC_OD_2 | ZDB-GENE-061207-31 | 0.734754 | 20 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | PC_1 | ZDB-GENE-061207-31 | 0.0801603 | 2 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_5 | ZDB-GENE-061207-31 | 0.478927 | 8.33333 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | PC_0 | ZDB-GENE-061207-31 | 0.0399004 | 2.27273 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | OPC_OD_2 | ZDB-GENE-061207-31 | 0.365551 | 14.2857 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_1 | ZDB-GENE-061207-31 | 0.731614 | 19.4444 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_0 | ZDB-GENE-061207-31 | 0.386548 | 8.57143 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_0 | ZDB-GENE-061207-31 | 0.403977 | 9.61539 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | PC_2 | ZDB-GENE-061207-31 | 0.0266454 | 1.27389 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | PC_4 | ZDB-GENE-061207-31 | 0.0512033 | 1.11111 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | Im | ZDB-GENE-061207-31 | 0.119599 | 2.12766 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | PC_2 | ZDB-GENE-061207-31 | 0.110088 | 5.26316 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_2 | ZDB-GENE-061207-31 | 0.737926 | 15.5689 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_2 | ZDB-GENE-061207-31 | 0.73546 | 18.1818 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_4 | ZDB-GENE-061207-31 | 0.419851 | 13.2075 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_4 | ZDB-GENE-061207-31 | 0.450285 | 16 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_1 | ZDB-GENE-061207-31 | 0.802629 | 18.1287 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_1 | ZDB-GENE-061207-31 | 1.07647 | 24.1379 | spred3 | |
| id | 31018142 | Brain | merged | 32 | Markers | OPC_OD_1 | ZDB-GENE-061207-31 | 0.35568 | 5.12821 | spred3 | |
| id | 31018142 | Brain | AB42 | 33 | Markers | OPC_OD_2 | ZDB-GENE-061207-31 | 0.23961 | 9.52381 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | PC_4 | ZDB-GENE-061207-31 | 0.200361 | 4.34783 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_4 | ZDB-GENE-061207-31 | 0.21708 | 11.7647 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_4 | ZDB-GENE-061207-31 | 0.664055 | 9.09091 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_6 | ZDB-GENE-061207-31 | 0.356252 | 10 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | Im | ZDB-GENE-061207-31 | 0.295849 | 5.26316 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_6 | ZDB-GENE-061207-31 | 1.76325 | 25 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | OPC_OD_1 | ZDB-GENE-061207-31 | 0.71736 | 10 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_3 | ZDB-GENE-061207-31 | 0.640482 | 20.5882 | spred3 | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_1 | ZDB-GENE-061207-31 | 0.539959 | 7.31707 | spred3 | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_2 | ZDB-GENE-061207-31 | 0.787325 | 15.5172 | spred3 |