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Gene:
- gcgra
- 562973
- ZDB-GENE-050516-1
Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq
datasets(53)
Tissue Type:
- PubMed Id:
29576475
- Treatment Condition : WT
Species : Zebrafish
Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain
datasets(42)
Tissue Type:
- PubMed Id:
29608178
- Treatment Condition : WT
Species : Zebrafish
Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity
datasets(34,35,32,33)
Tissue Type:
- PubMed Id:
31018142
- Treatment Condition : IL-4 treated
Species : Zebrafish
Single Cell Gene Data Details
Rows:41
| id | pubmed_id | tissue type | condition | dataset ID | dataset id | cluster name | cluster description | Species specific geneid | avg exp | % exp | gene symbol |
|---|---|---|---|---|---|---|---|---|---|---|---|
| id | 29576475 | Habenula | all | 53 | Markers | Hb09 | ZDB-GENE-050516-1 | 0.00982169 | 0.323625 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb13 | ZDB-GENE-050516-1 | 0.0281669 | 1.0101 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb06 | ZDB-GENE-050516-1 | 0.0944148 | 1.98676 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb14 | ZDB-GENE-050516-1 | 1.39524 | 26.4706 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb01 | ZDB-GENE-050516-1 | 0.0425663 | 0.732601 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb10 | ZDB-GENE-050516-1 | 0.0176429 | 0.961538 | GCGRA | |
| id | 29576475 | Habenula | all | 53 | Markers | Hb07 | ZDB-GENE-050516-1 | 0.0438857 | 1.20482 | GCGRA | |
| id | 29608178 | Brain | all | 42 | Markers | Progenitor cells | ZDB-GENE-050516-1 | 0.0408323 | 1.73034 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Ventral forebrain neurons | ZDB-GENE-050516-1 | 0.114377 | 3.7889 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Nascent forebrain neurons | ZDB-GENE-050516-1 | 0.0985803 | 2.29616 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic optic tectum neurons | ZDB-GENE-050516-1 | 0.0743745 | 1.58752 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | atf5b+ neurons | ZDB-GENE-050516-1 | 0.0684705 | 1.54143 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic subpallium neurons | ZDB-GENE-050516-1 | 0.0886459 | 1.94631 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | penkb+ neurons | ZDB-GENE-050516-1 | 0.0874021 | 2.77778 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | bnc2+, onecut1+ neurons | ZDB-GENE-050516-1 | 0.0534236 | 1.33883 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Unclassified neurons | ZDB-GENE-050516-1 | 0.214509 | 4.71638 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | sst3+ neurons | ZDB-GENE-050516-1 | 0.0783953 | 2.1398 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | phox2+ hindbrain neurons | ZDB-GENE-050516-1 | 0.0480563 | 1.32548 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Torus Longitudinalis neurons | ZDB-GENE-050516-1 | 0.0677174 | 2.08333 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | fezf1+, otpa+ neurons | ZDB-GENE-050516-1 | 0.0808048 | 2.86885 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Granule cell neurons | ZDB-GENE-050516-1 | 0.0932172 | 1.75355 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | rtn4rl2b+ eomesa+ pallium neurons | ZDB-GENE-050516-1 | 0.108389 | 3.85101 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | nefma+ glutamergic neurons (midbrain) | ZDB-GENE-050516-1 | 0.0954567 | 2.54237 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | tfap2b+, barhl2+ midbrain neurons | ZDB-GENE-050516-1 | 0.0571224 | 1.45732 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | rtn4rl2b+ pallium neurons | ZDB-GENE-050516-1 | 0.17701 | 4.22794 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | GABAergic hindbrain neurons | ZDB-GENE-050516-1 | 0.0757226 | 1.91898 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | Radial glia cells (progenitors) | ZDB-GENE-050516-1 | 0.0694483 | 2.23357 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | hmx3a+, hmx2+ neurons | ZDB-GENE-050516-1 | 0.234737 | 4.92041 | gcgra | |
| id | 29608178 | Brain | all | 42 | Markers | tcf7I2+, barhl2+ neurons | ZDB-GENE-050516-1 | 0.0677216 | 1.85522 | gcgra | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_3 | ZDB-GENE-050516-1 | 0.297761 | 6.25 | gcgra | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_0 | ZDB-GENE-050516-1 | 0.164506 | 1.92308 | gcgra | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_0 | ZDB-GENE-050516-1 | 0.0830728 | 0.995025 | gcgra | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_3 | ZDB-GENE-050516-1 | 0.078572 | 2.38095 | gcgra | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_0 | ZDB-GENE-050516-1 | 0.0714327 | 0.877193 | gcgra | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_1 | ZDB-GENE-050516-1 | 0.048581 | 1.72414 | gcgra | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_1 | ZDB-GENE-050516-1 | 0.129319 | 1.38889 | gcgra | |
| id | 31018142 | Brain | PBS | 35 | Markers | NN_2 | ZDB-GENE-050516-1 | 0.16722 | 3.44828 | gcgra | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_2 | ZDB-GENE-050516-1 | 0.0580764 | 1.1976 | gcgra | |
| id | 31018142 | Brain | merged | 32 | Markers | NN_1 | ZDB-GENE-050516-1 | 0.100704 | 1.75439 | gcgra | |
| id | 31018142 | Brain | AB42 | 33 | Markers | NN_3 | ZDB-GENE-050516-1 | 0.0539963 | 2.94118 | gcgra | |
| id | 31018142 | Brain | IL4 | 34 | Markers | NN_1 | ZDB-GENE-050516-1 | 0.124187 | 2.43902 | gcgra |