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Gene:
  • lnx2a
  • 553331
  • ZDB-GENE-060228-2

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:75
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-060228-2 0.524465 11.5385 LNX2A
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-060228-2 0.107936 5.76923 LNX2A
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-060228-2 0.440711 10.1695 LNX2A
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-060228-2 0.503653 16.1812 LNX2A
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-060228-2 0.493719 10.559 LNX2A
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-060228-2 0.405327 7.69231 LNX2A
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-060228-2 0.378765 7.62712 LNX2A
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-060228-2 0.470619 6.45161 LNX2A
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-060228-2 0.239421 7.07071 LNX2A
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-060228-2 0.175091 5.50847 LNX2A
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-060228-2 0.624005 10.2649 LNX2A
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-060228-2 0.542225 11.5578 LNX2A
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-060228-2 0.605746 12.2581 LNX2A
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-060228-2 0.276609 7.06107 LNX2A
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-060228-2 0.494908 10.241 LNX2A
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-060228-2 0.948295 26.4706 LNX2A
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-060228-2 0.490248 9.70043 lnx2a
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-060228-2 0.460378 9.5729 lnx2a
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-060228-2 0.473354 11.2654 lnx2a
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-060228-2 0.469899 9.37178 lnx2a
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-060228-2 0.398549 9.36903 lnx2a
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-060228-2 0.47707 12.5163 lnx2a
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-060228-2 0.497616 8.46634 lnx2a
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-060228-2 0.42838 10.2222 lnx2a
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-060228-2 0.572104 8.41703 lnx2a
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-060228-2 0.537068 18.6237 lnx2a
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-060228-2 0.575764 13.6035 lnx2a
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-060228-2 0.475268 10.331 lnx2a
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-060228-2 0.527077 12.1324 lnx2a
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-060228-2 0.526937 13.6066 lnx2a
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-060228-2 0.542843 11.194 lnx2a
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-060228-2 0.0397515 1.40396 lnx2a
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-060228-2 0.58785 10.9827 lnx2a
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-060228-2 0.565218 10.8725 lnx2a
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-060228-2 0.0721029 1.90166 lnx2a
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-060228-2 0.588476 14.682 lnx2a
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-060228-2 0.507578 10.0281 lnx2a
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-060228-2 0.47642 8.2467 lnx2a
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-060228-2 0.332622 8.33333 lnx2a
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-060228-2 0.357846 11.7647 lnx2a
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-060228-2 0.0352348 1.22699 lnx2a
id 31018142 Brain AB42 33 Markers OPC_OD_1 ZDB-GENE-060228-2 2.0331 28.5714 lnx2a
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-060228-2 1.06636 36.3636 lnx2a
id 31018142 Brain AB42 33 Markers PC_4 ZDB-GENE-060228-2 0.189922 5.88235 lnx2a
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-060228-2 0.486091 9.45274 lnx2a
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-060228-2 0.328455 7.01754 lnx2a
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-060228-2 0.453019 12.5 lnx2a
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-060228-2 0.583544 17.3913 lnx2a
id 31018142 Brain merged 32 Markers NN_6 ZDB-GENE-060228-2 0.452267 12.1212 lnx2a
id 31018142 Brain AB42 33 Markers NN_6 ZDB-GENE-060228-2 0.994988 26.6667 lnx2a
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-060228-2 0.463927 8.82353 lnx2a
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-060228-2 0.882515 17.3077 lnx2a
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-060228-2 0.0479894 2.38095 lnx2a
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-060228-2 0.216015 4.87805 lnx2a
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-060228-2 0.391604 8.33333 lnx2a
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-060228-2 0.114865 4 lnx2a
id 31018142 Brain IL4 34 Markers OPC_OD_2 ZDB-GENE-060228-2 0.777091 42.8571 lnx2a
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-060228-2 0.487001 11.1111 lnx2a
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-060228-2 1.02782 20.6897 lnx2a
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-060228-2 1.21117 15.3846 lnx2a
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-060228-2 1.41668 42.8571 lnx2a
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-060228-2 0.0717484 2.22222 lnx2a
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-060228-2 0.410564 5.71429 lnx2a
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-060228-2 0.0451239 1.89573 lnx2a
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-060228-2 0.066145 2.40964 lnx2a
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-060228-2 0.501191 10.7784 lnx2a
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-060228-2 0.388669 9.09091 lnx2a
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-060228-2 0.466578 11.3208 lnx2a
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-060228-2 0.292412 12 lnx2a
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-060228-2 0.205654 6.94444 lnx2a
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-060228-2 1.25148 13.3333 lnx2a
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-060228-2 0.623165 13.7931 lnx2a
id 31018142 Brain PBS 35 Markers NN_4 ZDB-GENE-060228-2 0.597423 11.7647 lnx2a
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-060228-2 0.550868 9.375 lnx2a
id 31018142 Brain IL4 34 Markers NN_4 ZDB-GENE-060228-2 0.660197 9.09091 lnx2a