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Gene:
  • si:dkey-108k21.12
  • 100333562
  • ZDB-GENE-131127-139

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single Cell Gene Data Details


Rows:30
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-131127-139 0.00808657 0.323625 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-131127-139 0.00500137 0.0915751 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-131127-139 0.0225713 0.25641 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-131127-139 0.0352816 1.92308 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-131127-139 0.0372251 0.662252 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-131127-139 0.0474343 1.00503 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-131127-139 0.00898915 0.19084 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-131127-139 0.0569864 2.0202 si:dkey-108k21.12
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-131127-139 0.0525055 1.69492 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-131127-139 0.00998382 0.277778 si:dkey-108k21.12
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-131127-139 0.00742468 0.245902 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-131127-139 0.0124836 0.23912 si:dkey-108k21.12
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-131127-139 0.0164259 0.639659 si:dkey-108k21.12
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-131127-139 0.024619 0.94697 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-131127-139 0.0143891 0.382897 si:dkey-108k21.12
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-131127-139 0.0121561 0.391134 si:dkey-108k21.12
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-131127-139 0.0095949 0.289436 si:dkey-108k21.12
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-131127-139 0.0178978 0.346981 si:dkey-108k21.12
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-131127-139 0.00585742 0.218261 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-131127-139 0.0165676 0.685284 si:dkey-108k21.12
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-131127-139 0.00311697 0.154321 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-131127-139 0.00621472 0.236806 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-131127-139 0.014202 0.140581 si:dkey-108k21.12
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-131127-139 0.0173716 0.30896 si:dkey-108k21.12
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-131127-139 0.00805896 0.168587 si:dkey-108k21.12
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-131127-139 0.0122118 0.382409 si:dkey-108k21.12
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-131127-139 0.0152703 0.32113 si:dkey-108k21.12
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-131127-139 0.00797392 0.142653 si:dkey-108k21.12
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-131127-139 0.0091437 0.268456 si:dkey-108k21.12
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-131127-139 0.0284192 0.736377 si:dkey-108k21.12