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Gene:
  • si:dkey-58i8.5
  • 100329858
  • ZDB-GENE-160728-66

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(34,32,35,33) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:28
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-160728-66 0.00766791 0.32551 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-160728-66 0.00814879 0.270636 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-160728-66 0.00681276 0.187441 si:dkey-58i8.5
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-160728-66 0.00608475 0.205973 si:dkey-58i8.5
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-160728-66 0.0091191 0.182636 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-160728-66 0.0164035 0.446144 si:dkey-58i8.5
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-160728-66 0.00862305 0.256904 si:dkey-58i8.5
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-160728-66 0.00918226 0.33557 si:dkey-58i8.5
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-160728-66 0.0129533 0.289436 si:dkey-58i8.5
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-160728-66 0.00693206 0.254638 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-160728-66 0.0115989 0.361111 si:dkey-58i8.5
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-160728-66 0.011244 0.409836 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-160728-66 0.0114794 0.223179 si:dkey-58i8.5
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-160728-66 0.00848844 0.21322 si:dkey-58i8.5
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-160728-66 0.00705061 0.441919 si:dkey-58i8.5
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-160728-66 0.021937 0.765795 si:dkey-58i8.5
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-160728-66 0.0147832 0.456323 si:dkey-58i8.5
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-160728-66 0.0163502 0.346981 si:dkey-58i8.5
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-160728-66 0.0142076 0.294551 si:dkey-58i8.5
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-160728-66 0.0128601 0.308642 si:dkey-58i8.5
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-160728-66 0.111354 2.27273 si:dkey-58i8.5
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-160728-66 0.0232207 0.473934 si:dkey-58i8.5
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-160728-66 0.0344104 1.11111 si:dkey-58i8.5
id 31018142 Brain IL4 34 Markers PC_4 ZDB-GENE-160728-66 0.134649 4.34783 si:dkey-58i8.5
id 31018142 Brain IL4 34 Markers PC_1 ZDB-GENE-160728-66 0.858397 12 si:dkey-58i8.5
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-160728-66 1.54891 4.87805 si:dkey-58i8.5
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-160728-66 0.677859 6.13497 si:dkey-58i8.5
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-160728-66 0.0564714 2.77778 si:dkey-58i8.5