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Gene:
  • dgkh
  • 100137124
  • ZDB-GENE-070912-328

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35,34) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:85
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-070912-328 0.49563 11.5578 DGKH
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-070912-328 0.288589 5.62914 DGKH
id 29576475 Habenula all 53 Markers Hb07 ZDB-GENE-070912-328 0.0516687 1.20482 DGKH
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-070912-328 0.310305 5.80645 DGKH
id 29576475 Habenula all 53 Markers Hb08 ZDB-GENE-070912-328 0.100641 2.8626 DGKH
id 29576475 Habenula all 53 Markers Hb13 ZDB-GENE-070912-328 0.317219 7.57576 DGKH
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-070912-328 0.0632547 2.11864 DGKH
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-070912-328 0.102276 3.8835 DGKH
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-070912-328 0.154773 3.72671 DGKH
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-070912-328 0.0421122 0.824176 DGKH
id 29576475 Habenula all 53 Markers Hb15 ZDB-GENE-070912-328 0.0816247 3.22581 DGKH
id 29576475 Habenula all 53 Markers Hb11 ZDB-GENE-070912-328 0.0539591 1.69492 DGKH
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-070912-328 0.160109 3.07692 DGKH
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-070912-328 0.162153 7.69231 DGKH
id 29576475 Habenula all 53 Markers Hb12 ZDB-GENE-070912-328 0.178736 5.08475 DGKH
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-070912-328 0.97694 18.3889 dgkh
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-070912-328 2.59894 39.5221 dgkh
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-070912-328 1.00832 18.0328 dgkh
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-070912-328 0.734757 9.74016 dgkh
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-070912-328 0.64224 13.113 dgkh
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-070912-328 0.858667 21.5278 dgkh
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-070912-328 0.176775 4.3395 dgkh
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-070912-328 1.43344 26.9231 dgkh
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-070912-328 0.28815 7.38061 dgkh
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-070912-328 0.429128 6.59264 dgkh
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-070912-328 0.78425 12.5136 dgkh
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-070912-328 0.582875 13.9716 dgkh
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-070912-328 0.484141 8.95033 dgkh
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-070912-328 0.289832 5.14933 dgkh
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-070912-328 0.903998 13.0795 dgkh
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-070912-328 1.79297 26.1313 dgkh
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-070912-328 0.643974 10.9827 dgkh
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-070912-328 4.62693 45.9344 dgkh
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-070912-328 0.320706 5.30201 dgkh
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-070912-328 0.910676 14.8748 dgkh
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-070912-328 0.113504 3.46068 dgkh
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-070912-328 0.814709 17.7469 dgkh
id 31018142 Brain merged 32 Markers PC_2 ZDB-GENE-070912-328 0.0546448 2.54777 dgkh
id 31018142 Brain merged 32 Markers OPC_OD_1 ZDB-GENE-070912-328 0.147702 2.5641 dgkh
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-070912-328 0.0443483 1.4218 dgkh
id 31018142 Brain merged 32 Markers PC_4 ZDB-GENE-070912-328 0.0491425 1.11111 dgkh
id 31018142 Brain merged 32 Markers NN_5 ZDB-GENE-070912-328 0.301994 7.5 dgkh
id 31018142 Brain AB42 33 Markers PC_2 ZDB-GENE-070912-328 0.0366413 2.63158 dgkh
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-070912-328 0.384874 7.18563 dgkh
id 31018142 Brain AB42 33 Markers Im ZDB-GENE-070912-328 0.143388 4.7619 dgkh
id 31018142 Brain merged 32 Markers NN_4 ZDB-GENE-070912-328 0.0261873 1.88679 dgkh
id 31018142 Brain AB42 33 Markers NN_2 ZDB-GENE-070912-328 0.372801 7.79221 dgkh
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-070912-328 0.244861 4.67836 dgkh
id 31018142 Brain AB42 33 Markers NN_4 ZDB-GENE-070912-328 0.055517 4 dgkh
id 31018142 Brain AB42 33 Markers NN_1 ZDB-GENE-070912-328 0.360488 6.89655 dgkh
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-070912-328 0.188271 4.16667 dgkh
id 31018142 Brain AB42 33 Markers OPC_OD_2 ZDB-GENE-070912-328 0.225124 9.52381 dgkh
id 31018142 Brain PBS 35 Markers NN_3 ZDB-GENE-070912-328 1.07341 17.6471 dgkh
id 31018142 Brain IL4 34 Markers NN_0 ZDB-GENE-070912-328 0.815276 8.57143 dgkh
id 31018142 Brain PBS 35 Markers NN_0 ZDB-GENE-070912-328 1.10133 15.3846 dgkh
id 31018142 Brain IL4 34 Markers NN_2 ZDB-GENE-070912-328 0.485537 6.25 dgkh
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-070912-328 0.345365 6.89655 dgkh
id 31018142 Brain IL4 34 Markers PC_3 ZDB-GENE-070912-328 0.0517229 2.17391 dgkh
id 31018142 Brain PBS 35 Markers PC_6 ZDB-GENE-070912-328 0.331235 10 dgkh
id 31018142 Brain IL4 34 Markers PC_5 ZDB-GENE-070912-328 0.0731722 4.54545 dgkh
id 31018142 Brain PBS 35 Markers PC_4 ZDB-GENE-070912-328 0.134025 3.0303 dgkh
id 31018142 Brain merged 32 Markers PC_5 ZDB-GENE-070912-328 0.0259643 1.6129 dgkh
id 31018142 Brain merged 32 Markers OPC_OD_2 ZDB-GENE-070912-328 0.185595 9.09091 dgkh
id 31018142 Brain merged 32 Markers Im ZDB-GENE-070912-328 0.0640668 2.12766 dgkh
id 31018142 Brain AB42 33 Markers NN_0 ZDB-GENE-070912-328 2.3905 45.614 dgkh
id 31018142 Brain merged 32 Markers PC_3 ZDB-GENE-070912-328 0.0248937 1.44928 dgkh
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-070912-328 0.0330087 1.20482 dgkh
id 31018142 Brain merged 32 Markers PC_6 ZDB-GENE-070912-328 0.0992576 4.16667 dgkh
id 31018142 Brain AB42 33 Markers NN_5 ZDB-GENE-070912-328 0.0568641 4.34783 dgkh
id 31018142 Brain merged 32 Markers NN_3 ZDB-GENE-070912-328 0.782552 17.8571 dgkh
id 31018142 Brain AB42 33 Markers PC_6 ZDB-GENE-070912-328 0.0403336 2.77778 dgkh
id 31018142 Brain merged 32 Markers NN_0 ZDB-GENE-070912-328 1.78269 31.3433 dgkh
id 31018142 Brain merged 32 Markers PC_1 ZDB-GENE-070912-328 0.0585475 1.22699 dgkh
id 31018142 Brain AB42 33 Markers PC_1 ZDB-GENE-070912-328 0.0754831 1.38889 dgkh
id 31018142 Brain PBS 35 Markers PC_1 ZDB-GENE-070912-328 0.100206 2.43902 dgkh
id 31018142 Brain IL4 34 Markers PC_2 ZDB-GENE-070912-328 0.13067 5.45455 dgkh
id 31018142 Brain PBS 35 Markers OPC_OD_1 ZDB-GENE-070912-328 0.384025 6.66667 dgkh
id 31018142 Brain IL4 34 Markers NN_1 ZDB-GENE-070912-328 0.180668 2.43902 dgkh
id 31018142 Brain PBS 35 Markers PC_3 ZDB-GENE-070912-328 0.0207074 1.96078 dgkh
id 31018142 Brain IL4 34 Markers NN_3 ZDB-GENE-070912-328 0.518672 6.25 dgkh
id 31018142 Brain PBS 35 Markers OPC_OD_2 ZDB-GENE-070912-328 0.279408 20 dgkh
id 31018142 Brain IL4 34 Markers PC_0 ZDB-GENE-070912-328 0.150404 4.54545 dgkh
id 31018142 Brain PBS 35 Markers NN_5 ZDB-GENE-070912-328 0.15361 8.33333 dgkh
id 31018142 Brain AB42 33 Markers NN_3 ZDB-GENE-070912-328 0.615872 23.5294 dgkh
id 31018142 Brain IL4 34 Markers NN_5 ZDB-GENE-070912-328 1.78571 20 dgkh