<-- Back To Summary
View As Dot Plot View Results as Heatmap
Gene:
  • ddr1
  • 100007346
  • ZDB-GENE-060323-2

Comprehensive Identification and Spatial Mapping of Habenular Neuronal Types Using Single-Cell RNA-Seq

datasets(53) Tissue Type: - PubMed Id: 29576475 - Treatment Condition : WT Species : Zebrafish

Simultaneous single-cell profiling of lineages and cell types in the vertebrate brain

datasets(42) Tissue Type: - PubMed Id: 29608178 - Treatment Condition : WT Species : Zebrafish

Single-Cell Transcriptomics Analyses of Neural Stem Cell Heterogeneity and Contextual Plasticity in a Zebrafish Brain Model of Amyloid Toxicity

datasets(32,33,35) Tissue Type: - PubMed Id: 31018142 - Treatment Condition : IL-4 treated Species : Zebrafish

Single Cell Gene Data Details


Rows:39
id pubmed_id tissue type condition dataset ID dataset id cluster name cluster description Species specific geneid avg exp % exp gene symbol
id 29576475 Habenula all 53 Markers Hb02 ZDB-GENE-060323-2 0.0418524 1.02564 DDR1
id 29576475 Habenula all 53 Markers 16 ZDB-GENE-060323-2 0.0446421 1.27119 DDR1
id 29576475 Habenula all 53 Markers Hb05 ZDB-GENE-060323-2 0.0770201 1.86335 DDR1
id 29576475 Habenula all 53 Markers Hb09 ZDB-GENE-060323-2 0.0398416 1.2945 DDR1
id 29576475 Habenula all 53 Markers Hb01 ZDB-GENE-060323-2 0.10414 1.92308 DDR1
id 29576475 Habenula all 53 Markers Hb10 ZDB-GENE-060323-2 0.0183745 0.961538 DDR1
id 29576475 Habenula all 53 Markers Hb06 ZDB-GENE-060323-2 0.191774 2.98013 DDR1
id 29576475 Habenula all 53 Markers Hb14 ZDB-GENE-060323-2 0.0541753 2.94118 DDR1
id 29576475 Habenula all 53 Markers Hb03 ZDB-GENE-060323-2 0.0702291 1.50754 DDR1
id 29576475 Habenula all 53 Markers Hb04 ZDB-GENE-060323-2 0.0421006 0.967742 DDR1
id 29608178 Brain all 42 Markers GABAergic optic tectum neurons ZDB-GENE-060323-2 0.0520771 1.33464 ddr1
id 29608178 Brain all 42 Markers Unclassified neurons ZDB-GENE-060323-2 0.0823613 2.7406 ddr1
id 29608178 Brain all 42 Markers atf5b+ neurons ZDB-GENE-060323-2 0.101063 2.18369 ddr1
id 29608178 Brain all 42 Markers sst3+ neurons ZDB-GENE-060323-2 0.0523043 1.14123 ddr1
id 29608178 Brain all 42 Markers GABAergic subpallium neurons ZDB-GENE-060323-2 0.0647866 1.61074 ddr1
id 29608178 Brain all 42 Markers Progenitor cells ZDB-GENE-060323-2 0.038145 1.59328 ddr1
id 29608178 Brain all 42 Markers Ventral forebrain neurons ZDB-GENE-060323-2 0.0593287 2.23275 ddr1
id 29608178 Brain all 42 Markers Nascent forebrain neurons ZDB-GENE-060323-2 0.0830539 2.20244 ddr1
id 29608178 Brain all 42 Markers bnc2+, onecut1+ neurons ZDB-GENE-060323-2 0.0596317 1.75077 ddr1
id 29608178 Brain all 42 Markers phox2+ hindbrain neurons ZDB-GENE-060323-2 0.0590626 1.47275 ddr1
id 29608178 Brain all 42 Markers penkb+ neurons ZDB-GENE-060323-2 0.0716917 2.16049 ddr1
id 29608178 Brain all 42 Markers rtn4rl2b+ eomesa+ pallium neurons ZDB-GENE-060323-2 0.0628534 3.0303 ddr1
id 29608178 Brain all 42 Markers Radial glia cells (progenitors) ZDB-GENE-060323-2 0.0380204 1.21251 ddr1
id 29608178 Brain all 42 Markers nefma+ glutamergic neurons (midbrain) ZDB-GENE-060323-2 0.0531971 1.82529 ddr1
id 29608178 Brain all 42 Markers tfap2b+, barhl2+ midbrain neurons ZDB-GENE-060323-2 0.0613188 1.52672 ddr1
id 29608178 Brain all 42 Markers Torus Longitudinalis neurons ZDB-GENE-060323-2 0.0569859 2 ddr1
id 29608178 Brain all 42 Markers fezf1+, otpa+ neurons ZDB-GENE-060323-2 0.086141 2.86885 ddr1
id 29608178 Brain all 42 Markers Granule cell neurons ZDB-GENE-060323-2 0.0581533 1.30719 ddr1
id 29608178 Brain all 42 Markers GABAergic hindbrain neurons ZDB-GENE-060323-2 0.0788106 2.45203 ddr1
id 29608178 Brain all 42 Markers hmx3a+, hmx2+ neurons ZDB-GENE-060323-2 0.0470924 1.5919 ddr1
id 29608178 Brain all 42 Markers tcf7I2+, barhl2+ neurons ZDB-GENE-060323-2 0.0644118 1.63696 ddr1
id 29608178 Brain all 42 Markers rtn4rl2b+ pallium neurons ZDB-GENE-060323-2 0.076242 2.02206 ddr1
id 31018142 Brain merged 32 Markers NN_2 ZDB-GENE-060323-2 0.0149514 0.598802 ddr1
id 31018142 Brain AB42 33 Markers PC_0 ZDB-GENE-060323-2 0.0126331 1.20482 ddr1
id 31018142 Brain PBS 35 Markers NN_2 ZDB-GENE-060323-2 0.0430496 1.72414 ddr1
id 31018142 Brain merged 32 Markers PC_0 ZDB-GENE-060323-2 0.0238121 1.4218 ddr1
id 31018142 Brain merged 32 Markers NN_1 ZDB-GENE-060323-2 0.0192051 0.584795 ddr1
id 31018142 Brain PBS 35 Markers NN_1 ZDB-GENE-060323-2 0.0456121 1.38889 ddr1
id 31018142 Brain PBS 35 Markers PC_0 ZDB-GENE-060323-2 0.0473311 2.38095 ddr1