Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 8 | Mes | Mesangial cells | wk18 | REN | 5972 | 9958 | 4.78 | 0.32 | 0.01 | 7.29713734121468e-58 | 2.45869745574887e-53 |
75 | 8 | Mes | Mesangial cells | wk18 | GNAS | 2778 | 4392 | 2.75 | 1 | 0.68 | 1.1136585237377e-23 | 3.75236102988181e-19 |
75 | 8 | Mes | Mesangial cells | wk18 | ACTA2 | 59 | 130 | 2.47 | 0.7 | 0.05 | 2.10059717706417e-58 | 7.07775212840002e-54 |
75 | 8 | Mes | Mesangial cells | wk18 | MGP | 4256 | 7060 | 2.39 | 0.85 | 0.02 | 1.80474461327531e-178 | 6.08090649996982e-174 |
75 | 8 | Mes | Mesangial cells | wk18 | A2M | 2 | 7 | 2.15 | 0.79 | 0.03 | 3.85197042413873e-101 | 1.2978829147093e-96 |
75 | 8 | Mes | Mesangial cells | wk18 | ENG | 2022 | 3349 | 1.95 | 0.85 | 0.05 | 1.27934852415544e-88 | 4.31063691728933e-84 |
75 | 8 | Mes | Mesangial cells | wk18 | TPM2 | 7169 | 12011 | 1.9 | 1 | 0.23 | 1.49964054580625e-36 | 5.05288885503957e-32 |
75 | 8 | Mes | Mesangial cells | wk18 | GATA3 | 2625 | 4172 | 1.87 | 0.64 | 0.02 | 2.2149163659814e-98 | 7.46293920353771e-94 |
75 | 8 | Mes | Mesangial cells | wk18 | KCNE4 | 23704 | 6244 | 1.78 | 0.79 | 0.03 | 2.66329472513104e-117 | 8.97370524685653e-113 |
75 | 8 | Mes | Mesangial cells | wk18 | LGALS1 | 3956 | 6561 | 1.59 | 1 | 0.19 | 5.76001986852758e-33 | 1.94078109450168e-28 |
75 | 8 | Mes | Mesangial cells | wk18 | MEF2C | 4208 | 6996 | 1.59 | 0.79 | 0.04 | 1.93085155137986e-95 | 6.50581121721929e-91 |
75 | 8 | Mes | Mesangial cells | wk18 | ANGPT2 | 285 | 485 | 1.54 | 0.73 | 0.03 | 5.5454543143687e-94 | 1.86848537668339e-89 |
75 | 8 | Mes | Mesangial cells | wk18 | HSPB1 | 3315 | 5246 | 1.46 | 0.94 | 0.56 | 1.8647385758208e-16 | 6.2830501573706e-12 |
75 | 8 | Mes | Mesangial cells | wk18 | TAGLN | 6876 | 11553 | 1.46 | 0.7 | 0.11 | 3.37269753932411e-27 | 1.13639670889987e-22 |
75 | 8 | Mes | Mesangial cells | wk18 | TINAGL1 | 64129 | 19168 | 1.42 | 0.7 | 0.07 | 6.85831813191543e-43 | 2.31084171136759e-38 |
75 | 8 | Mes | Mesangial cells | wk18 | BGN | 633 | 1044 | 1.41 | 0.82 | 0.2 | 7.59044278397294e-23 | 2.55752379163184e-18 |
75 | 8 | Mes | Mesangial cells | wk18 | CALD1 | 800 | 1441 | 1.38 | 1 | 0.57 | 1.95038179543846e-17 | 6.57161642155036e-13 |
75 | 8 | Mes | Mesangial cells | wk18 | ISYNA1 | 51477 | 29821 | 1.34 | 0.85 | 0.26 | 8.74907161808195e-20 | 2.94791219099653e-15 |
75 | 8 | Mes | Mesangial cells | wk18 | RGS16 | 6004 | 9997 | 1.33 | 0.32 | 0.02 | 3.75796017527498e-27 | 1.26620710145715e-22 |
75 | 8 | Mes | Mesangial cells | wk18 | MCAM | 4162 | 6934 | 1.25 | 0.64 | 0.07 | 7.62094656000489e-38 | 2.56780173392805e-33 |
75 | 8 | Mes | Mesangial cells | wk18 | CPE | 1363 | 2303 | 1.24 | 0.79 | 0.17 | 9.38655385397418e-25 | 3.16270545555806e-20 |
75 | 8 | Mes | Mesangial cells | wk18 | EBF1 | 1879 | 3126 | 1.22 | 0.67 | 0.03 | 6.04078855696398e-72 | 2.03538329638344e-67 |
75 | 8 | Mes | Mesangial cells | wk18 | APOE | 348 | 613 | 1.22 | 0.73 | 0.25 | 6.63240040328043e-13 | 2.23472099188131e-08 |
75 | 8 | Mes | Mesangial cells | wk18 | MECOM | 2122 | 3498 | 1.21 | 0.7 | 0.04 | 1.35755679326358e-74 | 4.57415185922231e-70 |
75 | 8 | Mes | Mesangial cells | wk18 | SERPINI1 | 5274 | 8943 | 1.19 | 0.44 | 0.03 | 1.61602788192458e-39 | 5.44504434535668e-35 |
75 | 8 | Mes | Mesangial cells | wk18 | PDGFRB | 5159 | 8804 | 1.19 | 0.82 | 0.1 | 6.10801767518447e-43 | 2.05803547547666e-38 |
75 | 8 | Mes | Mesangial cells | wk18 | PDLIM1 | 9124 | 2067 | 1.15 | 0.79 | 0.23 | 1.00454893390586e-19 | 3.38472717790241e-15 |
75 | 8 | Mes | Mesangial cells | wk18 | SELENOW | 6415 | 10752 | 1.15 | 0.91 | 0.43 | 9.07323947397799e-16 | 3.05713730836214e-11 |
75 | 8 | Mes | Mesangial cells | wk18 | GJA5 | 2702 | 4279 | 1.13 | 0.52 | 0.009 | 1.31046729494517e-133 | 4.41548850358825e-129 |
75 | 8 | Mes | Mesangial cells | wk18 | HOPX | 84525 | 24961 | 1.11 | 0.52 | 0.03 | 6.48735924980627e-44 | 2.18585082562973e-39 |
75 | 8 | Mes | Mesangial cells | wk18 | FRZB | 2487 | 3959 | 1.1 | 0.67 | 0.01 | 9.03558989574241e-141 | 3.04445165947145e-136 |
75 | 8 | Mes | Mesangial cells | wk18 | MEG3 | 55384 | 14575 | 1.09 | 0.76 | 0.15 | 2.14006119544752e-23 | 7.21072219194087e-19 |
75 | 8 | Mes | Mesangial cells | wk18 | NDUFA4L2 | 56901 | 29836 | 1.07 | 0.55 | 0.006 | 1.46965976665276e-181 | 4.9518716177598e-177 |
75 | 8 | Mes | Mesangial cells | wk18 | FHL2 | 2274 | 3703 | 1.07 | 0.61 | 0.12 | 3.77420194294725e-19 | 1.27167960265665e-14 |
75 | 8 | Mes | Mesangial cells | wk18 | LIMA1 | 51474 | 24636 | 1.06 | 0.64 | 0.1 | 7.14279405067388e-26 | 2.40669302743406e-21 |
75 | 8 | Mes | Mesangial cells | wk18 | CD55 | 1604 | 2665 | 1.05 | 0.7 | 0.16 | 3.12339725766713e-18 | 1.05239747199836e-13 |
75 | 8 | Mes | Mesangial cells | wk18 | THY1 | 7070 | 11801 | 1.04 | 0.64 | 0.09 | 3.1774902212935e-28 | 1.07062355516263e-23 |
75 | 8 | Mes | Mesangial cells | wk18 | RERGL | 79785 | 26213 | 1 | 0.29 | 0.002 | 2.93180138276421e-120 | 9.87841157908573e-116 |
75 | 8 | Mes | Mesangial cells | wk18 | TMEM47 | 83604 | 18515 | 0.99 | 0.52 | 0.04 | 2.08819246240533e-39 | 7.03595568282851e-35 |
75 | 8 | Mes | Mesangial cells | wk18 | F2R | 2149 | 3537 | 0.97 | 0.55 | 0.2 | 9.84070830050795e-09 | 0.000331572825477315 |
75 | 8 | Mes | Mesangial cells | wk18 | ANXA6 | 309 | 544 | 0.96 | 0.58 | 0.14 | 2.3724196939765e-15 | 7.99363091688442e-11 |
75 | 8 | Mes | Mesangial cells | wk18 | EMCN | 51705 | 16041 | 0.95 | 0.64 | 0.07 | 2.81197357657453e-31 | 9.47466376891022e-27 |
75 | 8 | Mes | Mesangial cells | wk18 | SNAI2 | 6591 | 11094 | 0.95 | 0.7 | 0.1 | 1.36747838368175e-27 | 4.60758166597728e-23 |
75 | 8 | Mes | Mesangial cells | wk18 | CD248 | 57124 | 18219 | 0.95 | 0.58 | 0.02 | 3.85134619814597e-69 | 1.2976725880033e-64 |
75 | 8 | Mes | Mesangial cells | wk18 | ATP5F1E | 514 | 838 | 0.94 | 1 | 0.82 | 4.18773980892625e-14 | 1.41101705121961e-09 |
75 | 8 | Mes | Mesangial cells | wk18 | IGF2 | 3481 | 5466 | 0.93 | 0.91 | 0.45 | 1.21492926158545e-10 | 4.093582653986e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | SULT1E1 | 6783 | 11377 | 0.93 | 0.85 | 0.12 | 1.45848799808882e-32 | 4.91422946076046e-28 |
75 | 8 | Mes | Mesangial cells | wk18 | SERPINH1 | 871 | 1546 | 0.93 | 0.94 | 0.55 | 4.3667795939708e-14 | 1.47134271639252e-09 |
75 | 8 | Mes | Mesangial cells | wk18 | TM4SF1 | 4071 | 11853 | 0.92 | 0.58 | 0.04 | 4.6731716616477e-47 | 1.57457845967558e-42 |
75 | 8 | Mes | Mesangial cells | wk18 | IGFBP5 | 3488 | 5474 | 0.91 | 0.52 | 0.08 | 2.0227978718263e-17 | 6.81561514933155e-13 |
75 | 8 | Mes | Mesangial cells | wk18 | ENSG00000267042 | NULL | 0.9 | 0.47 | 0.02 | 1.1387717588682e-48 | 3.83697756433053e-44 | |
75 | 8 | Mes | Mesangial cells | wk18 | TGFB1I1 | 7041 | 11767 | 0.89 | 0.64 | 0.14 | 1.19268170975408e-15 | 4.0186217528454e-11 |
75 | 8 | Mes | Mesangial cells | wk18 | ZFP36 | 7538 | 12862 | 0.87 | 0.64 | 0.28 | 1.2321047045055e-07 | 0.00415145359136083 |
75 | 8 | Mes | Mesangial cells | wk18 | FZD1 | 8321 | 4038 | 0.87 | 0.52 | 0.13 | 6.53237077952072e-13 | 2.20101701045171e-08 |
75 | 8 | Mes | Mesangial cells | wk18 | FN1 | 2335 | 3778 | 0.87 | 0.38 | 0.09 | 2.48936690472914e-08 | 0.000838767284879436 |
75 | 8 | Mes | Mesangial cells | wk18 | SOD3 | 6649 | 11181 | 0.87 | 0.35 | 0.01 | 1.70409498654765e-53 | 5.74177764767366e-49 |
75 | 8 | Mes | Mesangial cells | wk18 | BZW2 | 28969 | 18808 | 0.85 | 0.67 | 0.23 | 7.08909268568992e-11 | 2.38859888951636e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | CYTOR | 112597 | 28717 | 0.85 | 0.41 | 0.02 | 1.82807220575142e-47 | 6.15950649005883e-43 |
75 | 8 | Mes | Mesangial cells | wk18 | USP53 | 54532 | 29255 | 0.85 | 0.47 | 0.05 | 9.18448342724635e-24 | 3.09461984597639e-19 |
75 | 8 | Mes | Mesangial cells | wk18 | PELO | 53918 | 8829 | 0.85 | 0.55 | 0.15 | 1.66279812477364e-11 | 5.60263200161231e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | RASL11B | 65997 | 23804 | 0.84 | 0.61 | 0.13 | 4.33062998283186e-15 | 1.45916246641537e-10 |
75 | 8 | Mes | Mesangial cells | wk18 | SPARCL1 | 8404 | 11220 | 0.84 | 0.35 | 0.01 | 1.90981652434496e-57 | 6.43493579712791e-53 |
75 | 8 | Mes | Mesangial cells | wk18 | PTGER2 | 5732 | 9594 | 0.83 | 0.5 | 0.04 | 2.55580431006485e-34 | 8.6115270423325e-30 |
75 | 8 | Mes | Mesangial cells | wk18 | C11orf96 | 387763 | 38675 | 0.83 | 0.47 | 0.02 | 5.63763680341118e-51 | 1.89954534454136e-46 |
75 | 8 | Mes | Mesangial cells | wk18 | SH3BGRL | 6451 | 10823 | 0.83 | 0.91 | 0.5 | 1.06052150274824e-11 | 3.57332115135992e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | PLAT | 5327 | 9051 | 0.83 | 0.67 | 0.16 | 2.18540651321084e-15 | 7.36350870561262e-11 |
75 | 8 | Mes | Mesangial cells | wk18 | GSTM3 | 2947 | 4635 | 0.82 | 0.61 | 0.19 | 1.88521749911028e-11 | 6.35205184150218e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | RASD1 | 51655 | 15828 | 0.82 | 0.44 | 0.02 | 1.25243278449207e-45 | 4.2199470240676e-41 |
75 | 8 | Mes | Mesangial cells | wk18 | RBP1 | 5947 | 9919 | 0.82 | 1 | 0.46 | 1.61772737091964e-12 | 5.45077060357662e-08 |
75 | 8 | Mes | Mesangial cells | wk18 | STK17B | 9262 | 11396 | 0.81 | 0.41 | 0.03 | 1.43463453016305e-29 | 4.83385758593136e-25 |
75 | 8 | Mes | Mesangial cells | wk18 | AGTR1 | 185 | 336 | 0.81 | 0.41 | 0.03 | 1.28425833274097e-30 | 4.32718002633743e-26 |
75 | 8 | Mes | Mesangial cells | wk18 | IGFBP7 | 3490 | 5476 | 0.8 | 0.97 | 0.64 | 1.31436352548619e-11 | 4.42861646277317e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | MDK | 4192 | 6972 | 0.8 | 1 | 0.67 | 1.90480482417952e-10 | 6.41804937459048e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | TPM4 | 7171 | 12013 | 0.8 | 0.85 | 0.49 | 3.73799740565966e-09 | 0.000125948084586297 |
75 | 8 | Mes | Mesangial cells | wk18 | KCNJ8 | 3764 | 6269 | 0.8 | 0.47 | 0.03 | 4.79890661028786e-37 | 1.61694359327039e-32 |
75 | 8 | Mes | Mesangial cells | wk18 | NOTCH3 | 4854 | 7883 | 0.79 | 0.5 | 0.1 | 6.61143359312178e-15 | 2.22765643486645e-10 |
75 | 8 | Mes | Mesangial cells | wk18 | MIR143 | 406935 | 31530 | 0.79 | 0.44 | 0.01 | 1.28343110038095e-84 | 4.32439274962356e-80 |
75 | 8 | Mes | Mesangial cells | wk18 | PGM2 | 55276 | 8906 | 0.78 | 0.61 | 0.08 | 1.18546247631361e-28 | 3.99429726769106e-24 |
75 | 8 | Mes | Mesangial cells | wk18 | GNAI1 | 2770 | 4384 | 0.78 | 0.7 | 0.23 | 1.45193795368982e-11 | 4.89215974116249e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | CCN4 | 8840 | 12769 | 0.77 | 0.44 | 0.02 | 5.60020654985571e-54 | 1.88693359490838e-49 |
75 | 8 | Mes | Mesangial cells | wk18 | FHL3 | 2275 | 3704 | 0.77 | 0.47 | 0.06 | 9.98739125613779e-23 | 3.36515160984307e-18 |
75 | 8 | Mes | Mesangial cells | wk18 | UBA2 | 10054 | 30661 | 0.77 | 0.82 | 0.38 | 1.6695953678815e-10 | 5.62553463253991e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | MYH10 | 4628 | 7568 | 0.76 | 0.76 | 0.3 | 7.30245897794631e-11 | 2.46049052802923e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | TBX3 | 6926 | 11602 | 0.76 | 0.58 | 0.05 | 2.03923231260655e-40 | 6.8709893540965e-36 |
75 | 8 | Mes | Mesangial cells | wk18 | GASK1B | 51313 | 25312 | 0.75 | 0.41 | 0.01 | 1.41764160818484e-56 | 4.776601634618e-52 |
75 | 8 | Mes | Mesangial cells | wk18 | OAZ2 | 4947 | 8096 | 0.73 | 0.91 | 0.54 | 2.29044252633833e-09 | 7.71741704824438e-05 |
75 | 8 | Mes | Mesangial cells | wk18 | S100A11 | 6282 | 10488 | 0.73 | 0.79 | 0.44 | 7.14860361333752e-08 | 0.00240865050147794 |
75 | 8 | Mes | Mesangial cells | wk18 | UACA | 55075 | 15947 | 0.73 | 0.52 | 0.14 | 4.83618487510713e-11 | 1.6295041318186e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | C12orf57 | 113246 | 29521 | 0.73 | 0.91 | 0.44 | 4.57180049652402e-11 | 1.5404224592988e-06 |
75 | 8 | Mes | Mesangial cells | wk18 | ENPP2 | 5168 | 3357 | 0.72 | 0.44 | 0.03 | 6.84890798672543e-34 | 2.30767105704726e-29 |
75 | 8 | Mes | Mesangial cells | wk18 | TUBA1A | 7846 | 20766 | 0.72 | 0.91 | 0.63 | 4.78921720144608e-08 | 0.00161367884385524 |
75 | 8 | Mes | Mesangial cells | wk18 | PLCL1 | 5334 | 9063 | 0.72 | 0.26 | 0.01 | 1.75569487474788e-27 | 5.9156383109755e-23 |
75 | 8 | Mes | Mesangial cells | wk18 | CLIC4 | 25932 | 13518 | 0.71 | 0.7 | 0.3 | 7.89590585244383e-08 | 0.00266044651792242 |
75 | 8 | Mes | Mesangial cells | wk18 | PIP4P2 | 55529 | 25452 | 0.71 | 0.52 | 0.08 | 1.22014080371219e-18 | 4.11114242402786e-14 |
75 | 8 | Mes | Mesangial cells | wk18 | CCR10 | 2826 | 4474 | 0.7 | 0.41 | 0.01 | 1.40876124601583e-55 | 4.74668014232575e-51 |
75 | 8 | Mes | Mesangial cells | wk18 | PGF | 5228 | 8893 | 0.69 | 0.29 | 0.05 | 1.54607894143989e-09 | 5.20935838528755e-05 |
75 | 8 | Mes | Mesangial cells | wk18 | ITGA8 | 8516 | 6144 | 0.69 | 0.44 | 0.09 | 1.85783969720181e-11 | 6.25980507575177e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | MAGED2 | 10916 | 16353 | 0.69 | 1 | 0.82 | 7.26366135502198e-12 | 2.44741805696111e-07 |
75 | 8 | Mes | Mesangial cells | wk18 | MAP3K20 | 51776 | 17797 | 0.69 | 0.67 | 0.14 | 1.98442683136057e-18 | 6.6863277655863e-14 |
75 | 8 | Mes | Mesangial cells | wk18 | SLC8A1 | 6546 | 11068 | 0.68 | 0.32 | 0.03 | 1.1331448787158e-18 | 3.818018354345e-14 |