Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 8 | Mes | Mesangial cells | wk18 | REN | 5972 | 9958 | 4.78 | 0.32 | 0.01 | 7.2971373412147E-58 | 2.4586974557489E-53 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GNAS | 2778 | 4392 | 2.75 | 1 | 0.68 | 1.1136585237377E-23 | 3.7523610298818E-19 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ACTA2 | 59 | 130 | 2.47 | 0.7 | 0.05 | 2.1005971770642E-58 | 7.0777521284E-54 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MGP | 4256 | 7060 | 2.39 | 0.85 | 0.02 | 1.8047446132753E-178 | 6.0809064999698E-174 |
| 75 | 8 | Mes | Mesangial cells | wk18 | A2M | 2 | 7 | 2.15 | 0.79 | 0.03 | 3.8519704241387E-101 | 1.2978829147093E-96 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ENG | 2022 | 3349 | 1.95 | 0.85 | 0.05 | 1.2793485241554E-88 | 4.3106369172893E-84 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TPM2 | 7169 | 12011 | 1.9 | 1 | 0.23 | 1.4996405458063E-36 | 5.0528888550396E-32 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GATA3 | 2625 | 4172 | 1.87 | 0.64 | 0.02 | 2.2149163659814E-98 | 7.4629392035377E-94 |
| 75 | 8 | Mes | Mesangial cells | wk18 | KCNE4 | 23704 | 6244 | 1.78 | 0.79 | 0.03 | 2.663294725131E-117 | 8.9737052468565E-113 |
| 75 | 8 | Mes | Mesangial cells | wk18 | LGALS1 | 3956 | 6561 | 1.59 | 1 | 0.19 | 5.7600198685276E-33 | 1.9407810945017E-28 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MEF2C | 4208 | 6996 | 1.59 | 0.79 | 0.04 | 1.9308515513799E-95 | 6.5058112172193E-91 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ANGPT2 | 285 | 485 | 1.54 | 0.73 | 0.03 | 5.5454543143687E-94 | 1.8684853766834E-89 |
| 75 | 8 | Mes | Mesangial cells | wk18 | HSPB1 | 3315 | 5246 | 1.46 | 0.94 | 0.56 | 1.8647385758208E-16 | 6.2830501573706E-12 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TAGLN | 6876 | 11553 | 1.46 | 0.7 | 0.11 | 3.3726975393241E-27 | 1.1363967088999E-22 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TINAGL1 | 64129 | 19168 | 1.42 | 0.7 | 0.07 | 6.8583181319154E-43 | 2.3108417113676E-38 |
| 75 | 8 | Mes | Mesangial cells | wk18 | BGN | 633 | 1044 | 1.41 | 0.82 | 0.2 | 7.5904427839729E-23 | 2.5575237916318E-18 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CALD1 | 800 | 1441 | 1.38 | 1 | 0.57 | 1.9503817954385E-17 | 6.5716164215504E-13 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ISYNA1 | 51477 | 29821 | 1.34 | 0.85 | 0.26 | 8.749071618082E-20 | 2.9479121909965E-15 |
| 75 | 8 | Mes | Mesangial cells | wk18 | RGS16 | 6004 | 9997 | 1.33 | 0.32 | 0.02 | 3.757960175275E-27 | 1.2662071014571E-22 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MCAM | 4162 | 6934 | 1.25 | 0.64 | 0.07 | 7.6209465600049E-38 | 2.567801733928E-33 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CPE | 1363 | 2303 | 1.24 | 0.79 | 0.17 | 9.3865538539742E-25 | 3.1627054555581E-20 |
| 75 | 8 | Mes | Mesangial cells | wk18 | EBF1 | 1879 | 3126 | 1.22 | 0.67 | 0.03 | 6.040788556964E-72 | 2.0353832963834E-67 |
| 75 | 8 | Mes | Mesangial cells | wk18 | APOE | 348 | 613 | 1.22 | 0.73 | 0.25 | 6.6324004032804E-13 | 2.2347209918813E-8 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MECOM | 2122 | 3498 | 1.21 | 0.7 | 0.04 | 1.3575567932636E-74 | 4.5741518592223E-70 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SERPINI1 | 5274 | 8943 | 1.19 | 0.44 | 0.03 | 1.6160278819246E-39 | 5.4450443453567E-35 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PDGFRB | 5159 | 8804 | 1.19 | 0.82 | 0.1 | 6.1080176751845E-43 | 2.0580354754767E-38 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PDLIM1 | 9124 | 2067 | 1.15 | 0.79 | 0.23 | 1.0045489339059E-19 | 3.3847271779024E-15 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SELENOW | 6415 | 10752 | 1.15 | 0.91 | 0.43 | 9.073239473978E-16 | 3.0571373083621E-11 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GJA5 | 2702 | 4279 | 1.13 | 0.52 | 0.009 | 1.3104672949452E-133 | 4.4154885035883E-129 |
| 75 | 8 | Mes | Mesangial cells | wk18 | HOPX | 84525 | 24961 | 1.11 | 0.52 | 0.03 | 6.4873592498063E-44 | 2.1858508256297E-39 |
| 75 | 8 | Mes | Mesangial cells | wk18 | FRZB | 2487 | 3959 | 1.1 | 0.67 | 0.01 | 9.0355898957424E-141 | 3.0444516594714E-136 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MEG3 | 55384 | 14575 | 1.09 | 0.76 | 0.15 | 2.1400611954475E-23 | 7.2107221919409E-19 |
| 75 | 8 | Mes | Mesangial cells | wk18 | NDUFA4L2 | 56901 | 29836 | 1.07 | 0.55 | 0.006 | 1.4696597666528E-181 | 4.9518716177598E-177 |
| 75 | 8 | Mes | Mesangial cells | wk18 | FHL2 | 2274 | 3703 | 1.07 | 0.61 | 0.12 | 3.7742019429473E-19 | 1.2716796026566E-14 |
| 75 | 8 | Mes | Mesangial cells | wk18 | LIMA1 | 51474 | 24636 | 1.06 | 0.64 | 0.1 | 7.1427940506739E-26 | 2.4066930274341E-21 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CD55 | 1604 | 2665 | 1.05 | 0.7 | 0.16 | 3.1233972576671E-18 | 1.0523974719984E-13 |
| 75 | 8 | Mes | Mesangial cells | wk18 | THY1 | 7070 | 11801 | 1.04 | 0.64 | 0.09 | 3.1774902212935E-28 | 1.0706235551626E-23 |
| 75 | 8 | Mes | Mesangial cells | wk18 | RERGL | 79785 | 26213 | 1 | 0.29 | 0.002 | 2.9318013827642E-120 | 9.8784115790857E-116 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TMEM47 | 83604 | 18515 | 0.99 | 0.52 | 0.04 | 2.0881924624053E-39 | 7.0359556828285E-35 |
| 75 | 8 | Mes | Mesangial cells | wk18 | F2R | 2149 | 3537 | 0.97 | 0.55 | 0.2 | 9.840708300508E-9 | 0.00033157282547732 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ANXA6 | 309 | 544 | 0.96 | 0.58 | 0.14 | 2.3724196939765E-15 | 7.9936309168844E-11 |
| 75 | 8 | Mes | Mesangial cells | wk18 | EMCN | 51705 | 16041 | 0.95 | 0.64 | 0.07 | 2.8119735765745E-31 | 9.4746637689102E-27 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SNAI2 | 6591 | 11094 | 0.95 | 0.7 | 0.1 | 1.3674783836818E-27 | 4.6075816659773E-23 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CD248 | 57124 | 18219 | 0.95 | 0.58 | 0.02 | 3.851346198146E-69 | 1.2976725880033E-64 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ATP5F1E | 514 | 838 | 0.94 | 1 | 0.82 | 4.1877398089262E-14 | 1.4110170512196E-9 |
| 75 | 8 | Mes | Mesangial cells | wk18 | IGF2 | 3481 | 5466 | 0.93 | 0.91 | 0.45 | 1.2149292615854E-10 | 4.093582653986E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SULT1E1 | 6783 | 11377 | 0.93 | 0.85 | 0.12 | 1.4584879980888E-32 | 4.9142294607605E-28 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SERPINH1 | 871 | 1546 | 0.93 | 0.94 | 0.55 | 4.3667795939708E-14 | 1.4713427163925E-9 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TM4SF1 | 4071 | 11853 | 0.92 | 0.58 | 0.04 | 4.6731716616477E-47 | 1.5745784596756E-42 |
| 75 | 8 | Mes | Mesangial cells | wk18 | IGFBP5 | 3488 | 5474 | 0.91 | 0.52 | 0.08 | 2.0227978718263E-17 | 6.8156151493316E-13 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ENSG00000267042 | NULL | 0.9 | 0.47 | 0.02 | 1.1387717588682E-48 | 3.8369775643305E-44 | |
| 75 | 8 | Mes | Mesangial cells | wk18 | TGFB1I1 | 7041 | 11767 | 0.89 | 0.64 | 0.14 | 1.1926817097541E-15 | 4.0186217528454E-11 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ZFP36 | 7538 | 12862 | 0.87 | 0.64 | 0.28 | 1.2321047045055E-7 | 0.0041514535913608 |
| 75 | 8 | Mes | Mesangial cells | wk18 | FZD1 | 8321 | 4038 | 0.87 | 0.52 | 0.13 | 6.5323707795207E-13 | 2.2010170104517E-8 |
| 75 | 8 | Mes | Mesangial cells | wk18 | FN1 | 2335 | 3778 | 0.87 | 0.38 | 0.09 | 2.4893669047291E-8 | 0.00083876728487944 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SOD3 | 6649 | 11181 | 0.87 | 0.35 | 0.01 | 1.7040949865477E-53 | 5.7417776476737E-49 |
| 75 | 8 | Mes | Mesangial cells | wk18 | BZW2 | 28969 | 18808 | 0.85 | 0.67 | 0.23 | 7.0890926856899E-11 | 2.3885988895164E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CYTOR | 112597 | 28717 | 0.85 | 0.41 | 0.02 | 1.8280722057514E-47 | 6.1595064900588E-43 |
| 75 | 8 | Mes | Mesangial cells | wk18 | USP53 | 54532 | 29255 | 0.85 | 0.47 | 0.05 | 9.1844834272464E-24 | 3.0946198459764E-19 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PELO | 53918 | 8829 | 0.85 | 0.55 | 0.15 | 1.6627981247736E-11 | 5.6026320016123E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | RASL11B | 65997 | 23804 | 0.84 | 0.61 | 0.13 | 4.3306299828319E-15 | 1.4591624664154E-10 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SPARCL1 | 8404 | 11220 | 0.84 | 0.35 | 0.01 | 1.909816524345E-57 | 6.4349357971279E-53 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PTGER2 | 5732 | 9594 | 0.83 | 0.5 | 0.04 | 2.5558043100648E-34 | 8.6115270423325E-30 |
| 75 | 8 | Mes | Mesangial cells | wk18 | C11orf96 | 387763 | 38675 | 0.83 | 0.47 | 0.02 | 5.6376368034112E-51 | 1.8995453445414E-46 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SH3BGRL | 6451 | 10823 | 0.83 | 0.91 | 0.5 | 1.0605215027482E-11 | 3.5733211513599E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PLAT | 5327 | 9051 | 0.83 | 0.67 | 0.16 | 2.1854065132108E-15 | 7.3635087056126E-11 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GSTM3 | 2947 | 4635 | 0.82 | 0.61 | 0.19 | 1.8852174991103E-11 | 6.3520518415022E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | RASD1 | 51655 | 15828 | 0.82 | 0.44 | 0.02 | 1.2524327844921E-45 | 4.2199470240676E-41 |
| 75 | 8 | Mes | Mesangial cells | wk18 | RBP1 | 5947 | 9919 | 0.82 | 1 | 0.46 | 1.6177273709196E-12 | 5.4507706035766E-8 |
| 75 | 8 | Mes | Mesangial cells | wk18 | STK17B | 9262 | 11396 | 0.81 | 0.41 | 0.03 | 1.4346345301631E-29 | 4.8338575859314E-25 |
| 75 | 8 | Mes | Mesangial cells | wk18 | AGTR1 | 185 | 336 | 0.81 | 0.41 | 0.03 | 1.284258332741E-30 | 4.3271800263374E-26 |
| 75 | 8 | Mes | Mesangial cells | wk18 | IGFBP7 | 3490 | 5476 | 0.8 | 0.97 | 0.64 | 1.3143635254862E-11 | 4.4286164627732E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MDK | 4192 | 6972 | 0.8 | 1 | 0.67 | 1.9048048241795E-10 | 6.4180493745905E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TPM4 | 7171 | 12013 | 0.8 | 0.85 | 0.49 | 3.7379974056597E-9 | 0.0001259480845863 |
| 75 | 8 | Mes | Mesangial cells | wk18 | KCNJ8 | 3764 | 6269 | 0.8 | 0.47 | 0.03 | 4.7989066102879E-37 | 1.6169435932704E-32 |
| 75 | 8 | Mes | Mesangial cells | wk18 | NOTCH3 | 4854 | 7883 | 0.79 | 0.5 | 0.1 | 6.6114335931218E-15 | 2.2276564348665E-10 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MIR143 | 406935 | 31530 | 0.79 | 0.44 | 0.01 | 1.283431100381E-84 | 4.3243927496236E-80 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PGM2 | 55276 | 8906 | 0.78 | 0.61 | 0.08 | 1.1854624763136E-28 | 3.9942972676911E-24 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GNAI1 | 2770 | 4384 | 0.78 | 0.7 | 0.23 | 1.4519379536898E-11 | 4.8921597411625E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CCN4 | 8840 | 12769 | 0.77 | 0.44 | 0.02 | 5.6002065498557E-54 | 1.8869335949084E-49 |
| 75 | 8 | Mes | Mesangial cells | wk18 | FHL3 | 2275 | 3704 | 0.77 | 0.47 | 0.06 | 9.9873912561378E-23 | 3.3651516098431E-18 |
| 75 | 8 | Mes | Mesangial cells | wk18 | UBA2 | 10054 | 30661 | 0.77 | 0.82 | 0.38 | 1.6695953678815E-10 | 5.6255346325399E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MYH10 | 4628 | 7568 | 0.76 | 0.76 | 0.3 | 7.3024589779463E-11 | 2.4604905280292E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TBX3 | 6926 | 11602 | 0.76 | 0.58 | 0.05 | 2.0392323126066E-40 | 6.8709893540965E-36 |
| 75 | 8 | Mes | Mesangial cells | wk18 | GASK1B | 51313 | 25312 | 0.75 | 0.41 | 0.01 | 1.4176416081848E-56 | 4.776601634618E-52 |
| 75 | 8 | Mes | Mesangial cells | wk18 | OAZ2 | 4947 | 8096 | 0.73 | 0.91 | 0.54 | 2.2904425263383E-9 | 7.7174170482444E-5 |
| 75 | 8 | Mes | Mesangial cells | wk18 | S100A11 | 6282 | 10488 | 0.73 | 0.79 | 0.44 | 7.1486036133375E-8 | 0.0024086505014779 |
| 75 | 8 | Mes | Mesangial cells | wk18 | UACA | 55075 | 15947 | 0.73 | 0.52 | 0.14 | 4.8361848751071E-11 | 1.6295041318186E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | C12orf57 | 113246 | 29521 | 0.73 | 0.91 | 0.44 | 4.571800496524E-11 | 1.5404224592988E-6 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ENPP2 | 5168 | 3357 | 0.72 | 0.44 | 0.03 | 6.8489079867254E-34 | 2.3076710570473E-29 |
| 75 | 8 | Mes | Mesangial cells | wk18 | TUBA1A | 7846 | 20766 | 0.72 | 0.91 | 0.63 | 4.7892172014461E-8 | 0.0016136788438552 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PLCL1 | 5334 | 9063 | 0.72 | 0.26 | 0.01 | 1.7556948747479E-27 | 5.9156383109755E-23 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CLIC4 | 25932 | 13518 | 0.71 | 0.7 | 0.3 | 7.8959058524438E-8 | 0.0026604465179224 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PIP4P2 | 55529 | 25452 | 0.71 | 0.52 | 0.08 | 1.2201408037122E-18 | 4.1111424240279E-14 |
| 75 | 8 | Mes | Mesangial cells | wk18 | CCR10 | 2826 | 4474 | 0.7 | 0.41 | 0.01 | 1.4087612460158E-55 | 4.7466801423258E-51 |
| 75 | 8 | Mes | Mesangial cells | wk18 | PGF | 5228 | 8893 | 0.69 | 0.29 | 0.05 | 1.5460789414399E-9 | 5.2093583852876E-5 |
| 75 | 8 | Mes | Mesangial cells | wk18 | ITGA8 | 8516 | 6144 | 0.69 | 0.44 | 0.09 | 1.8578396972018E-11 | 6.2598050757518E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MAGED2 | 10916 | 16353 | 0.69 | 1 | 0.82 | 7.263661355022E-12 | 2.4474180569611E-7 |
| 75 | 8 | Mes | Mesangial cells | wk18 | MAP3K20 | 51776 | 17797 | 0.69 | 0.67 | 0.14 | 1.9844268313606E-18 | 6.6863277655863E-14 |
| 75 | 8 | Mes | Mesangial cells | wk18 | SLC8A1 | 6546 | 11068 | 0.68 | 0.32 | 0.03 | 1.1331448787158E-18 | 3.818018354345E-14 |