Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 5 | ICb | Interstitial cells b | wk18 | SULT1E1 | 6783 | 11377 | 3.28 | 0.96 | 0.09 | 9.1075781384023E-249 | 3.0687073779533E-244 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL1A1 | 1277 | 2197 | 2.79 | 1 | 0.19 | 1.4216178368697E-175 | 4.7899991395488E-171 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CLDN11 | 5010 | 8514 | 2.56 | 0.81 | 0.09 | 1.1052399649665E-172 | 3.7239955379582E-168 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL1A2 | 1278 | 2198 | 2.41 | 0.98 | 0.14 | 6.6042403908149E-189 | 2.2252327572812E-184 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CTSC | 1075 | 2528 | 2.37 | 0.94 | 0.21 | 5.8139574470056E-141 | 1.9589548221941E-136 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MFAP4 | 4239 | 7035 | 2.14 | 0.91 | 0.1 | 1.0066865579903E-199 | 3.3919296884926E-195 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL3A1 | 1281 | 2201 | 2.03 | 1 | 0.38 | 1.121538007907E-113 | 3.7789101638418E-109 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MOXD1 | 26002 | 21063 | 2.03 | 0.83 | 0.05 | 7.83415907156E-251 | 2.6396415575714E-246 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | LGALS1 | 3956 | 6561 | 1.98 | 0.98 | 0.15 | 3.0288184579074E-164 | 1.0205300912073E-159 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | OLFML3 | 56944 | 24956 | 1.95 | 0.88 | 0.05 | 5.5028160163741E-267 | 1.8541188285571E-262 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PLK2 | 10769 | 19699 | 1.91 | 0.83 | 0.21 | 3.195659340192E-102 | 1.0767454580843E-97 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | ALX1 | 8092 | 1494 | 1.87 | 0.79 | 0.01 | 0 | 0 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PRSS23 | 11098 | 14370 | 1.82 | 0.81 | 0.13 | 5.507861289578E-141 | 1.8558187829104E-136 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TGFBI | 7045 | 11771 | 1.81 | 0.81 | 0.04 | 1.4060504724293E-253 | 4.7375464618033E-249 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PCOLCE | 5118 | 8738 | 1.79 | 0.78 | 0.06 | 2.6732559441695E-196 | 9.0072685782847E-192 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CHODL | 140578 | 17807 | 1.71 | 0.56 | 0.02 | 9.9992938708907E-212 | 3.3691620768579E-207 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MEG3 | 55384 | 14575 | 1.69 | 0.86 | 0.11 | 7.8948549310724E-155 | 2.6600924204755E-150 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PTN | 5764 | 9630 | 1.69 | 0.91 | 0.3 | 3.554429683837E-91 | 1.197629537672E-86 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TNC | 3371 | 5318 | 1.61 | 0.63 | 0.03 | 6.0584219180997E-183 | 2.0413246810845E-178 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CPE | 1363 | 2303 | 1.56 | 0.78 | 0.14 | 1.7254195708221E-119 | 5.8136287019279E-115 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MMP2 | 4313 | 7166 | 1.56 | 0.7 | 0.05 | 2.7742767788917E-186 | 9.3476481787979E-182 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PDGFRA | 5156 | 8803 | 1.56 | 0.63 | 0.03 | 9.3023289155993E-195 | 3.134326704822E-190 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | DCN | 1634 | 2705 | 1.52 | 0.81 | 0.19 | 2.1082709445338E-88 | 7.1036081205123E-84 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | AGTR2 | 186 | 338 | 1.44 | 0.51 | 0.02 | 1.7226473141985E-159 | 5.8042878604605E-155 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TMX4 | 56255 | 25237 | 1.44 | 0.6 | 0.26 | 1.2238453171976E-35 | 4.1236244117655E-31 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL6A3 | 1293 | 2213 | 1.43 | 0.71 | 0.06 | 6.8839487667897E-168 | 2.3194776974821E-163 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | EMILIN1 | 11117 | 19880 | 1.41 | 0.68 | 0.12 | 1.1476466273944E-99 | 3.8668805463425E-95 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PCDH18 | 54510 | 14268 | 1.39 | 0.57 | 0.07 | 6.3145496027507E-105 | 2.1276243431508E-100 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CYP1B1 | 1545 | 2597 | 1.38 | 0.64 | 0.1 | 7.6698426337137E-93 | 2.5842767770035E-88 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | GUCY1A1 | 2982 | 4685 | 1.37 | 0.6 | 0.06 | 9.6369670499406E-122 | 3.247079677807E-117 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | IGFBP5 | 3488 | 5474 | 1.36 | 0.61 | 0.06 | 1.8476843125573E-127 | 6.2255875227306E-123 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | ATP2B1 | 490 | 814 | 1.32 | 0.83 | 0.42 | 9.5251075119703E-56 | 3.2093897250833E-51 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FLRT2 | 23768 | 3761 | 1.31 | 0.65 | 0.09 | 4.3603896036265E-109 | 1.4691896730459E-104 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | IGF2 | 3481 | 5466 | 1.25 | 0.96 | 0.43 | 1.5899025155342E-68 | 5.357017535841E-64 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | ZEB2 | 9839 | 14881 | 1.25 | 0.71 | 0.19 | 3.044514320975E-72 | 1.0258186553093E-67 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FBLN5 | 10516 | 3602 | 1.23 | 0.49 | 0.05 | 1.5253895048996E-95 | 5.1396473978088E-91 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL21A1 | 81578 | 17025 | 1.22 | 0.51 | 0.03 | 8.5906118566461E-145 | 2.8945207589783E-140 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | KLHL13 | 90293 | 22931 | 1.2 | 0.5 | 0.04 | 1.3964312533445E-115 | 4.705135465019E-111 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PLAC9 | 219348 | 19255 | 1.17 | 0.46 | 0.02 | 2.5430808987297E-137 | 8.5686567801799E-133 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | NTM | 50863 | 17941 | 1.17 | 0.53 | 0.04 | 7.6749955663353E-123 | 2.586013006121E-118 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | APCDD1 | 147495 | 15718 | 1.17 | 0.35 | 0.01 | 1.8730500035757E-129 | 6.311054682048E-125 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MARCKS | 4082 | 6759 | 1.15 | 0.9 | 0.51 | 8.4565892737788E-56 | 2.849363189907E-51 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | LMO4 | 8543 | 6644 | 1.15 | 0.61 | 0.28 | 2.5500450144228E-35 | 8.5921216715961E-31 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL5A2 | 1290 | 2210 | 1.13 | 0.53 | 0.07 | 7.0615033884408E-91 | 2.3793029517012E-86 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CDH11 | 1009 | 1750 | 1.11 | 0.61 | 0.16 | 1.6052736031953E-57 | 5.4088088786063E-53 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | NKAIN2 | 154215 | 16443 | 1.11 | 0.48 | 0.01 | 9.0733297140298E-188 | 3.0571677138452E-183 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MYLK | 4638 | 7590 | 1.09 | 0.68 | 0.19 | 1.8718387603712E-58 | 6.3069735191946E-54 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | NKAIN4 | 128414 | 16191 | 1.08 | 0.61 | 0.15 | 4.4592864607855E-62 | 1.5025119800971E-57 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | AKAP12 | 9590 | 370 | 1.07 | 0.79 | 0.35 | 1.2334342983513E-46 | 4.155933524865E-42 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | LRRC17 | 10234 | 16895 | 1.07 | 0.51 | 0.04 | 2.4194184153287E-113 | 8.1519884086086E-109 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FN1 | 2335 | 3778 | 1.06 | 0.5 | 0.07 | 1.0796899729135E-73 | 3.6379073947349E-69 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | GPM6B | 2824 | 4461 | 1.06 | 0.43 | 0.09 | 8.0826729389677E-49 | 2.7233758200558E-44 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | PLAT | 5327 | 9051 | 1.05 | 0.58 | 0.14 | 3.2232365749618E-55 | 1.0860373315676E-50 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | GPC3 | 2719 | 4451 | 1.05 | 0.98 | 0.68 | 4.1348422196955E-51 | 1.3931937375042E-46 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CHST2 | 9435 | 1970 | 1.05 | 0.55 | 0.13 | 2.4247772328409E-56 | 8.170044408334E-52 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL6A2 | 1292 | 2212 | 1.05 | 0.49 | 0.07 | 3.1287650465078E-75 | 1.0542060947704E-70 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MDFI | 4188 | 6967 | 1.04 | 0.48 | 0.04 | 2.0972014403752E-107 | 7.0663105332001E-103 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | ALDH1A2 | 8854 | 15472 | 1.04 | 0.65 | 0.29 | 3.6130014829956E-35 | 1.2173647196805E-30 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | BMPR1B | 658 | 1077 | 1.04 | 0.36 | 0.06 | 6.6798074945415E-52 | 2.2506943372108E-47 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | EDNRB | 1910 | 3180 | 1.03 | 0.46 | 0.03 | 1.4863992668381E-120 | 5.0082736896842E-116 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | EMCN | 51705 | 16041 | 1.02 | 0.53 | 0.06 | 1.5983466039573E-97 | 5.3854690473738E-93 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CLMP | 79827 | 24039 | 1.02 | 0.45 | 0.03 | 6.5234825732221E-121 | 2.1980222182214E-116 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SERPINE2 | 5270 | 8951 | 1.01 | 0.49 | 0.18 | 4.4268189738319E-29 | 1.4915723850429E-24 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SYT1 | 6857 | 11509 | 0.99 | 0.54 | 0.09 | 9.1107050106168E-73 | 3.0697609462772E-68 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | NCAM1 | 4684 | 7656 | 0.99 | 0.48 | 0.15 | 1.0950712407773E-35 | 3.689733038675E-31 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CPED1 | 79974 | 26159 | 0.98 | 0.38 | 0.02 | 1.0267548375902E-113 | 3.4595477497764E-109 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SERPINH1 | 871 | 1546 | 0.98 | 0.88 | 0.54 | 3.3250191540382E-45 | 1.1203319537616E-40 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | BGN | 633 | 1044 | 0.97 | 0.61 | 0.19 | 1.9239252789223E-42 | 6.4824738348008E-38 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SH3BGRL | 6451 | 10823 | 0.97 | 0.78 | 0.49 | 7.5514556800373E-37 | 2.5443874768318E-32 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FSTL1 | 11167 | 3972 | 0.97 | 0.91 | 0.59 | 1.4756462532413E-47 | 4.9720424856713E-43 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TBX3 | 6926 | 11602 | 0.96 | 0.45 | 0.03 | 3.1969717789136E-113 | 1.0771876711871E-108 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | S1PR3 | 1903 | 3167 | 0.96 | 0.4 | 0.04 | 2.4476930936941E-82 | 8.247257109893E-78 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | LDB2 | 9079 | 6533 | 0.95 | 0.4 | 0.04 | 8.6679588837428E-73 | 2.9205820662883E-68 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL6A1 | 1291 | 2211 | 0.95 | 0.59 | 0.25 | 2.2702206715712E-33 | 7.6492815307922E-29 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | KCNQ1OT1 | 10984 | 6295 | 0.94 | 0.74 | 0.42 | 3.9653066287689E-30 | 1.3360704154974E-25 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SLC40A1 | 30061 | 10909 | 0.94 | 0.46 | 0.15 | 8.6103358460694E-31 | 2.9011665599746E-26 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SNAI2 | 6591 | 11094 | 0.93 | 0.5 | 0.09 | 1.2307441786795E-61 | 4.1468694356426E-57 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | C7 | 730 | 1346 | 0.92 | 0.23 | 0.01 | 4.6143342872468E-56 | 1.554753794745E-51 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | RBP1 | 5947 | 9919 | 0.92 | 0.87 | 0.44 | 1.5300263223262E-45 | 5.1552706904459E-41 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL4A1 | 1282 | 2202 | 0.9 | 0.56 | 0.26 | 1.6302135439544E-27 | 5.492841515E-23 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | GNG2 | 54331 | 4404 | 0.9 | 0.39 | 0.04 | 5.2896918350522E-73 | 1.7823087669025E-68 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | ENSG00000269916 | NULL | 0.9 | 0.33 | 0.01 | 1.6318740906408E-107 | 5.4984365610051E-103 | |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SFRP1 | 6422 | 10776 | 0.88 | 0.34 | 0.05 | 1.5894273687494E-50 | 5.3554165762641E-46 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | RGS2 | 5997 | 9998 | 0.87 | 0.48 | 0.17 | 4.6054874769083E-29 | 1.5517729504695E-24 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CAVIN1 | 284119 | 9688 | 0.84 | 0.4 | 0.06 | 2.2592632493E-55 | 7.6123615921915E-51 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TPD52L1 | 7164 | 12006 | 0.84 | 0.35 | 0.08 | 5.9825963973E-33 | 2.0157760301063E-28 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | COL5A1 | 1289 | 2209 | 0.84 | 0.33 | 0.03 | 1.4096118727859E-67 | 4.7495462441649E-63 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CALD1 | 800 | 1441 | 0.83 | 0.8 | 0.57 | 1.6502771802654E-26 | 5.5604439311864E-22 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | SYNPO2 | 171024 | 17732 | 0.83 | 0.3 | 0.01 | 8.2469208750862E-115 | 2.7787175196515E-110 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FBLIM1 | 54751 | 24686 | 0.82 | 0.48 | 0.15 | 3.2496037279883E-32 | 1.0949214801084E-27 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | GRID2 | 2895 | 4576 | 0.82 | 0.28 | 0.01 | 5.2825919720465E-95 | 1.7799165390614E-90 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | MYH10 | 4628 | 7568 | 0.82 | 0.58 | 0.29 | 9.6207304514869E-25 | 3.241608918324E-20 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FXYD6 | 53826 | 4030 | 0.82 | 0.63 | 0.26 | 2.5652661710026E-34 | 8.643407836576E-30 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | NRP1 | 8829 | 8004 | 0.81 | 0.47 | 0.17 | 1.0971716836478E-28 | 3.6968102708829E-24 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | FMOD | 2331 | 3774 | 0.81 | 0.33 | 0.02 | 6.5988261821993E-88 | 2.2234084938302E-83 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TCF21 | 6943 | 11632 | 0.81 | 0.96 | 0.56 | 1.322692449156E-38 | 4.4566799381862E-34 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | CDH7 | 1005 | 1766 | 0.81 | 0.35 | 0.1 | 5.0598943045329E-27 | 1.7048807869693E-22 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | OGN | 4969 | 8126 | 0.8 | 0.23 | 0.006 | 1.4327417789868E-97 | 4.8274801501182E-93 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | LUM | 4060 | 6724 | 0.79 | 0.18 | 0.006 | 6.4838281550235E-73 | 2.1846610585536E-68 |
| 75 | 5 | ICb | Interstitial cells b | wk18 | TPM2 | 7169 | 12011 | 0.79 | 0.6 | 0.22 | 1.8570887754378E-33 | 6.2572749199601E-29 |