Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 5 | ICb | Interstitial cells b | wk18 | SULT1E1 | 6783 | 11377 | 3.28 | 0.96 | 0.09 | 9.10757813840234e-249 | 3.06870737795329e-244 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL1A1 | 1277 | 2197 | 2.79 | 1 | 0.19 | 1.42161783686971e-175 | 4.78999913954879e-171 |
75 | 5 | ICb | Interstitial cells b | wk18 | CLDN11 | 5010 | 8514 | 2.56 | 0.81 | 0.09 | 1.10523996496653e-172 | 3.72399553795822e-168 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL1A2 | 1278 | 2198 | 2.41 | 0.98 | 0.14 | 6.60424039081489e-189 | 2.22523275728117e-184 |
75 | 5 | ICb | Interstitial cells b | wk18 | CTSC | 1075 | 2528 | 2.37 | 0.94 | 0.21 | 5.81395744700559e-141 | 1.95895482219406e-136 |
75 | 5 | ICb | Interstitial cells b | wk18 | MFAP4 | 4239 | 7035 | 2.14 | 0.91 | 0.1 | 1.00668655799033e-199 | 3.39192968849263e-195 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL3A1 | 1281 | 2201 | 2.03 | 1 | 0.38 | 1.121538007907e-113 | 3.77891016384184e-109 |
75 | 5 | ICb | Interstitial cells b | wk18 | MOXD1 | 26002 | 21063 | 2.03 | 0.83 | 0.05 | 7.83415907156e-251 | 2.63964155757143e-246 |
75 | 5 | ICb | Interstitial cells b | wk18 | LGALS1 | 3956 | 6561 | 1.98 | 0.98 | 0.15 | 3.02881845790744e-164 | 1.02053009120733e-159 |
75 | 5 | ICb | Interstitial cells b | wk18 | OLFML3 | 56944 | 24956 | 1.95 | 0.88 | 0.05 | 5.50281601637411e-267 | 1.85411882855709e-262 |
75 | 5 | ICb | Interstitial cells b | wk18 | PLK2 | 10769 | 19699 | 1.91 | 0.83 | 0.21 | 3.19565934019199e-102 | 1.07674545808429e-97 |
75 | 5 | ICb | Interstitial cells b | wk18 | ALX1 | 8092 | 1494 | 1.87 | 0.79 | 0.01 | 0 | 0 |
75 | 5 | ICb | Interstitial cells b | wk18 | PRSS23 | 11098 | 14370 | 1.82 | 0.81 | 0.13 | 5.50786128957802e-141 | 1.85581878291042e-136 |
75 | 5 | ICb | Interstitial cells b | wk18 | TGFBI | 7045 | 11771 | 1.81 | 0.81 | 0.04 | 1.4060504724293e-253 | 4.73754646180328e-249 |
75 | 5 | ICb | Interstitial cells b | wk18 | PCOLCE | 5118 | 8738 | 1.79 | 0.78 | 0.06 | 2.6732559441695e-196 | 9.0072685782847e-192 |
75 | 5 | ICb | Interstitial cells b | wk18 | CHODL | 140578 | 17807 | 1.71 | 0.56 | 0.02 | 9.99929387089068e-212 | 3.3691620768579e-207 |
75 | 5 | ICb | Interstitial cells b | wk18 | MEG3 | 55384 | 14575 | 1.69 | 0.86 | 0.11 | 7.8948549310724e-155 | 2.66009242047554e-150 |
75 | 5 | ICb | Interstitial cells b | wk18 | PTN | 5764 | 9630 | 1.69 | 0.91 | 0.3 | 3.55442968383699e-91 | 1.19762953767204e-86 |
75 | 5 | ICb | Interstitial cells b | wk18 | TNC | 3371 | 5318 | 1.61 | 0.63 | 0.03 | 6.05842191809968e-183 | 2.04132468108451e-178 |
75 | 5 | ICb | Interstitial cells b | wk18 | CPE | 1363 | 2303 | 1.56 | 0.78 | 0.14 | 1.72541957082207e-119 | 5.81362870192787e-115 |
75 | 5 | ICb | Interstitial cells b | wk18 | MMP2 | 4313 | 7166 | 1.56 | 0.7 | 0.05 | 2.77427677889175e-186 | 9.34764817879786e-182 |
75 | 5 | ICb | Interstitial cells b | wk18 | PDGFRA | 5156 | 8803 | 1.56 | 0.63 | 0.03 | 9.30232891559931e-195 | 3.13432670482203e-190 |
75 | 5 | ICb | Interstitial cells b | wk18 | DCN | 1634 | 2705 | 1.52 | 0.81 | 0.19 | 2.10827094453382e-88 | 7.10360812051226e-84 |
75 | 5 | ICb | Interstitial cells b | wk18 | AGTR2 | 186 | 338 | 1.44 | 0.51 | 0.02 | 1.72264731419851e-159 | 5.80428786046045e-155 |
75 | 5 | ICb | Interstitial cells b | wk18 | TMX4 | 56255 | 25237 | 1.44 | 0.6 | 0.26 | 1.22384531719758e-35 | 4.12362441176551e-31 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL6A3 | 1293 | 2213 | 1.43 | 0.71 | 0.06 | 6.88394876678969e-168 | 2.31947769748212e-163 |
75 | 5 | ICb | Interstitial cells b | wk18 | EMILIN1 | 11117 | 19880 | 1.41 | 0.68 | 0.12 | 1.14764662739435e-99 | 3.86688054634251e-95 |
75 | 5 | ICb | Interstitial cells b | wk18 | PCDH18 | 54510 | 14268 | 1.39 | 0.57 | 0.07 | 6.3145496027507e-105 | 2.12762434315082e-100 |
75 | 5 | ICb | Interstitial cells b | wk18 | CYP1B1 | 1545 | 2597 | 1.38 | 0.64 | 0.1 | 7.66984263371374e-93 | 2.58427677700351e-88 |
75 | 5 | ICb | Interstitial cells b | wk18 | GUCY1A1 | 2982 | 4685 | 1.37 | 0.6 | 0.06 | 9.63696704994059e-122 | 3.24707967780698e-117 |
75 | 5 | ICb | Interstitial cells b | wk18 | IGFBP5 | 3488 | 5474 | 1.36 | 0.61 | 0.06 | 1.84768431255732e-127 | 6.22558752273064e-123 |
75 | 5 | ICb | Interstitial cells b | wk18 | ATP2B1 | 490 | 814 | 1.32 | 0.83 | 0.42 | 9.52510751197028e-56 | 3.20938972508327e-51 |
75 | 5 | ICb | Interstitial cells b | wk18 | FLRT2 | 23768 | 3761 | 1.31 | 0.65 | 0.09 | 4.36038960362655e-109 | 1.46918967304593e-104 |
75 | 5 | ICb | Interstitial cells b | wk18 | IGF2 | 3481 | 5466 | 1.25 | 0.96 | 0.43 | 1.58990251553421e-68 | 5.35701753584098e-64 |
75 | 5 | ICb | Interstitial cells b | wk18 | ZEB2 | 9839 | 14881 | 1.25 | 0.71 | 0.19 | 3.04451432097501e-72 | 1.02581865530932e-67 |
75 | 5 | ICb | Interstitial cells b | wk18 | FBLN5 | 10516 | 3602 | 1.23 | 0.49 | 0.05 | 1.52538950489963e-95 | 5.1396473978088e-91 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL21A1 | 81578 | 17025 | 1.22 | 0.51 | 0.03 | 8.59061185664606e-145 | 2.89452075897832e-140 |
75 | 5 | ICb | Interstitial cells b | wk18 | KLHL13 | 90293 | 22931 | 1.2 | 0.5 | 0.04 | 1.3964312533445e-115 | 4.70513546501896e-111 |
75 | 5 | ICb | Interstitial cells b | wk18 | PLAC9 | 219348 | 19255 | 1.17 | 0.46 | 0.02 | 2.5430808987297e-137 | 8.56865678017986e-133 |
75 | 5 | ICb | Interstitial cells b | wk18 | NTM | 50863 | 17941 | 1.17 | 0.53 | 0.04 | 7.67499556633533e-123 | 2.58601300612103e-118 |
75 | 5 | ICb | Interstitial cells b | wk18 | APCDD1 | 147495 | 15718 | 1.17 | 0.35 | 0.01 | 1.87305000357571e-129 | 6.31105468204799e-125 |
75 | 5 | ICb | Interstitial cells b | wk18 | MARCKS | 4082 | 6759 | 1.15 | 0.9 | 0.51 | 8.45658927377883e-56 | 2.84936318990704e-51 |
75 | 5 | ICb | Interstitial cells b | wk18 | LMO4 | 8543 | 6644 | 1.15 | 0.61 | 0.28 | 2.55004501442278e-35 | 8.59212167159611e-31 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL5A2 | 1290 | 2210 | 1.13 | 0.53 | 0.07 | 7.06150338844078e-91 | 2.37930295170124e-86 |
75 | 5 | ICb | Interstitial cells b | wk18 | CDH11 | 1009 | 1750 | 1.11 | 0.61 | 0.16 | 1.60527360319533e-57 | 5.40880887860635e-53 |
75 | 5 | ICb | Interstitial cells b | wk18 | NKAIN2 | 154215 | 16443 | 1.11 | 0.48 | 0.01 | 9.07332971402976e-188 | 3.05716771384519e-183 |
75 | 5 | ICb | Interstitial cells b | wk18 | MYLK | 4638 | 7590 | 1.09 | 0.68 | 0.19 | 1.87183876037116e-58 | 6.30697351919458e-54 |
75 | 5 | ICb | Interstitial cells b | wk18 | NKAIN4 | 128414 | 16191 | 1.08 | 0.61 | 0.15 | 4.4592864607855e-62 | 1.50251198009707e-57 |
75 | 5 | ICb | Interstitial cells b | wk18 | AKAP12 | 9590 | 370 | 1.07 | 0.79 | 0.35 | 1.23343429835134e-46 | 4.155933524865e-42 |
75 | 5 | ICb | Interstitial cells b | wk18 | LRRC17 | 10234 | 16895 | 1.07 | 0.51 | 0.04 | 2.41941841532872e-113 | 8.15198840860858e-109 |
75 | 5 | ICb | Interstitial cells b | wk18 | FN1 | 2335 | 3778 | 1.06 | 0.5 | 0.07 | 1.07968997291355e-73 | 3.63790739473492e-69 |
75 | 5 | ICb | Interstitial cells b | wk18 | GPM6B | 2824 | 4461 | 1.06 | 0.43 | 0.09 | 8.08267293896773e-49 | 2.72337582005579e-44 |
75 | 5 | ICb | Interstitial cells b | wk18 | PLAT | 5327 | 9051 | 1.05 | 0.58 | 0.14 | 3.22323657496179e-55 | 1.08603733156763e-50 |
75 | 5 | ICb | Interstitial cells b | wk18 | GPC3 | 2719 | 4451 | 1.05 | 0.98 | 0.68 | 4.1348422196955e-51 | 1.3931937375042e-46 |
75 | 5 | ICb | Interstitial cells b | wk18 | CHST2 | 9435 | 1970 | 1.05 | 0.55 | 0.13 | 2.42477723284087e-56 | 8.17004440833403e-52 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL6A2 | 1292 | 2212 | 1.05 | 0.49 | 0.07 | 3.12876504650783e-75 | 1.05420609477035e-70 |
75 | 5 | ICb | Interstitial cells b | wk18 | MDFI | 4188 | 6967 | 1.04 | 0.48 | 0.04 | 2.09720144037516e-107 | 7.06631053320008e-103 |
75 | 5 | ICb | Interstitial cells b | wk18 | ALDH1A2 | 8854 | 15472 | 1.04 | 0.65 | 0.29 | 3.6130014829956e-35 | 1.21736471968054e-30 |
75 | 5 | ICb | Interstitial cells b | wk18 | BMPR1B | 658 | 1077 | 1.04 | 0.36 | 0.06 | 6.67980749454149e-52 | 2.25069433721081e-47 |
75 | 5 | ICb | Interstitial cells b | wk18 | EDNRB | 1910 | 3180 | 1.03 | 0.46 | 0.03 | 1.48639926683806e-120 | 5.00827368968416e-116 |
75 | 5 | ICb | Interstitial cells b | wk18 | EMCN | 51705 | 16041 | 1.02 | 0.53 | 0.06 | 1.59834660395731e-97 | 5.38546904737377e-93 |
75 | 5 | ICb | Interstitial cells b | wk18 | CLMP | 79827 | 24039 | 1.02 | 0.45 | 0.03 | 6.52348257322206e-121 | 2.19802221822144e-116 |
75 | 5 | ICb | Interstitial cells b | wk18 | SERPINE2 | 5270 | 8951 | 1.01 | 0.49 | 0.18 | 4.42681897383187e-29 | 1.49157238504291e-24 |
75 | 5 | ICb | Interstitial cells b | wk18 | SYT1 | 6857 | 11509 | 0.99 | 0.54 | 0.09 | 9.11070501061675e-73 | 3.06976094627721e-68 |
75 | 5 | ICb | Interstitial cells b | wk18 | NCAM1 | 4684 | 7656 | 0.99 | 0.48 | 0.15 | 1.0950712407773e-35 | 3.68973303867504e-31 |
75 | 5 | ICb | Interstitial cells b | wk18 | CPED1 | 79974 | 26159 | 0.98 | 0.38 | 0.02 | 1.02675483759019e-113 | 3.45954774977637e-109 |
75 | 5 | ICb | Interstitial cells b | wk18 | SERPINH1 | 871 | 1546 | 0.98 | 0.88 | 0.54 | 3.32501915403824e-45 | 1.12033195376164e-40 |
75 | 5 | ICb | Interstitial cells b | wk18 | BGN | 633 | 1044 | 0.97 | 0.61 | 0.19 | 1.9239252789223e-42 | 6.4824738348008e-38 |
75 | 5 | ICb | Interstitial cells b | wk18 | SH3BGRL | 6451 | 10823 | 0.97 | 0.78 | 0.49 | 7.55145568003732e-37 | 2.54438747683178e-32 |
75 | 5 | ICb | Interstitial cells b | wk18 | FSTL1 | 11167 | 3972 | 0.97 | 0.91 | 0.59 | 1.47564625324132e-47 | 4.9720424856713e-43 |
75 | 5 | ICb | Interstitial cells b | wk18 | TBX3 | 6926 | 11602 | 0.96 | 0.45 | 0.03 | 3.19697177891356e-113 | 1.07718767118713e-108 |
75 | 5 | ICb | Interstitial cells b | wk18 | S1PR3 | 1903 | 3167 | 0.96 | 0.4 | 0.04 | 2.44769309369413e-82 | 8.24725710989302e-78 |
75 | 5 | ICb | Interstitial cells b | wk18 | LDB2 | 9079 | 6533 | 0.95 | 0.4 | 0.04 | 8.6679588837428e-73 | 2.9205820662883e-68 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL6A1 | 1291 | 2211 | 0.95 | 0.59 | 0.25 | 2.27022067157124e-33 | 7.64928153079215e-29 |
75 | 5 | ICb | Interstitial cells b | wk18 | KCNQ1OT1 | 10984 | 6295 | 0.94 | 0.74 | 0.42 | 3.96530662876888e-30 | 1.33607041549739e-25 |
75 | 5 | ICb | Interstitial cells b | wk18 | SLC40A1 | 30061 | 10909 | 0.94 | 0.46 | 0.15 | 8.61033584606943e-31 | 2.90116655997463e-26 |
75 | 5 | ICb | Interstitial cells b | wk18 | SNAI2 | 6591 | 11094 | 0.93 | 0.5 | 0.09 | 1.23074417867946e-61 | 4.14686943564257e-57 |
75 | 5 | ICb | Interstitial cells b | wk18 | C7 | 730 | 1346 | 0.92 | 0.23 | 0.01 | 4.61433428724684e-56 | 1.55475379474495e-51 |
75 | 5 | ICb | Interstitial cells b | wk18 | RBP1 | 5947 | 9919 | 0.92 | 0.87 | 0.44 | 1.53002632232621e-45 | 5.15527069044594e-41 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL4A1 | 1282 | 2202 | 0.9 | 0.56 | 0.26 | 1.63021354395441e-27 | 5.49284151499999e-23 |
75 | 5 | ICb | Interstitial cells b | wk18 | GNG2 | 54331 | 4404 | 0.9 | 0.39 | 0.04 | 5.28969183505225e-73 | 1.78230876690251e-68 |
75 | 5 | ICb | Interstitial cells b | wk18 | ENSG00000269916 | NULL | 0.9 | 0.33 | 0.01 | 1.6318740906408e-107 | 5.4984365610051e-103 | |
75 | 5 | ICb | Interstitial cells b | wk18 | SFRP1 | 6422 | 10776 | 0.88 | 0.34 | 0.05 | 1.58942736874937e-50 | 5.35541657626414e-46 |
75 | 5 | ICb | Interstitial cells b | wk18 | RGS2 | 5997 | 9998 | 0.87 | 0.48 | 0.17 | 4.60548747690834e-29 | 1.5517729504695e-24 |
75 | 5 | ICb | Interstitial cells b | wk18 | CAVIN1 | 284119 | 9688 | 0.84 | 0.4 | 0.06 | 2.25926324930003e-55 | 7.61236159219153e-51 |
75 | 5 | ICb | Interstitial cells b | wk18 | TPD52L1 | 7164 | 12006 | 0.84 | 0.35 | 0.08 | 5.98259639730004e-33 | 2.01577603010628e-28 |
75 | 5 | ICb | Interstitial cells b | wk18 | COL5A1 | 1289 | 2209 | 0.84 | 0.33 | 0.03 | 1.40961187278593e-67 | 4.74954624416493e-63 |
75 | 5 | ICb | Interstitial cells b | wk18 | CALD1 | 800 | 1441 | 0.83 | 0.8 | 0.57 | 1.65027718026543e-26 | 5.56044393118635e-22 |
75 | 5 | ICb | Interstitial cells b | wk18 | SYNPO2 | 171024 | 17732 | 0.83 | 0.3 | 0.01 | 8.24692087508615e-115 | 2.77871751965153e-110 |
75 | 5 | ICb | Interstitial cells b | wk18 | FBLIM1 | 54751 | 24686 | 0.82 | 0.48 | 0.15 | 3.24960372798833e-32 | 1.09492148010839e-27 |
75 | 5 | ICb | Interstitial cells b | wk18 | GRID2 | 2895 | 4576 | 0.82 | 0.28 | 0.01 | 5.28259197204653e-95 | 1.77991653906136e-90 |
75 | 5 | ICb | Interstitial cells b | wk18 | MYH10 | 4628 | 7568 | 0.82 | 0.58 | 0.29 | 9.62073045148685e-25 | 3.24160891832398e-20 |
75 | 5 | ICb | Interstitial cells b | wk18 | FXYD6 | 53826 | 4030 | 0.82 | 0.63 | 0.26 | 2.56526617100256e-34 | 8.64340783657601e-30 |
75 | 5 | ICb | Interstitial cells b | wk18 | NRP1 | 8829 | 8004 | 0.81 | 0.47 | 0.17 | 1.0971716836478e-28 | 3.69681027088291e-24 |
75 | 5 | ICb | Interstitial cells b | wk18 | FMOD | 2331 | 3774 | 0.81 | 0.33 | 0.02 | 6.59882618219932e-88 | 2.22340849383024e-83 |
75 | 5 | ICb | Interstitial cells b | wk18 | TCF21 | 6943 | 11632 | 0.81 | 0.96 | 0.56 | 1.32269244915598e-38 | 4.45667993818616e-34 |
75 | 5 | ICb | Interstitial cells b | wk18 | CDH7 | 1005 | 1766 | 0.81 | 0.35 | 0.1 | 5.05989430453293e-27 | 1.70488078696933e-22 |
75 | 5 | ICb | Interstitial cells b | wk18 | OGN | 4969 | 8126 | 0.8 | 0.23 | 0.006 | 1.43274177898682e-97 | 4.8274801501182e-93 |
75 | 5 | ICb | Interstitial cells b | wk18 | LUM | 4060 | 6724 | 0.79 | 0.18 | 0.006 | 6.48382815502349e-73 | 2.18466105855362e-68 |
75 | 5 | ICb | Interstitial cells b | wk18 | TPM2 | 7169 | 12011 | 0.79 | 0.6 | 0.22 | 1.85708877543779e-33 | 6.25727491996009e-29 |