Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 4 | ICa | Interstitial cells a | wk18 | LGALS1 | 3956 | 6561 | 2.05 | 0.99 | 0.16 | 2.9494844634915E-130 | 9.9379929512881E-126 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL1A2 | 1278 | 2198 | 1.95 | 0.96 | 0.15 | 9.8593216220626E-130 | 3.3219998273378E-125 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MFAP4 | 4239 | 7035 | 1.77 | 0.85 | 0.11 | 7.1021830599415E-121 | 2.3930095602167E-116 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL1A1 | 1277 | 2197 | 1.76 | 0.97 | 0.2 | 3.8699592185858E-105 | 1.3039440591103E-100 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PCOLCE | 5118 | 8738 | 1.62 | 0.86 | 0.07 | 3.0796265261364E-175 | 1.0376493617164E-170 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PTN | 5764 | 9630 | 1.53 | 0.76 | 0.32 | 1.0869943266006E-40 | 3.6625186840482E-36 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CYP1B1 | 1545 | 2597 | 1.5 | 0.63 | 0.11 | 1.0162668504439E-66 | 3.4242095258855E-62 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TPM2 | 7169 | 12011 | 1.47 | 0.82 | 0.21 | 2.5822514915645E-71 | 8.7006381756775E-67 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MEG3 | 55384 | 14575 | 1.47 | 0.84 | 0.12 | 1.389319267437E-105 | 4.6811723397023E-101 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | OLFML3 | 56944 | 24956 | 1.41 | 0.71 | 0.07 | 2.5754858040626E-120 | 8.6778418682084E-116 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TGFBI | 7045 | 11771 | 1.4 | 0.63 | 0.06 | 2.0580247830425E-104 | 6.9343087039835E-100 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL3A1 | 1281 | 2201 | 1.36 | 0.96 | 0.39 | 7.4494989635734E-55 | 2.5100341807864E-50 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SULT1E1 | 6783 | 11377 | 1.36 | 0.61 | 0.11 | 6.2642938775858E-57 | 2.1106911791138E-52 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | IGF2 | 3481 | 5466 | 1.34 | 0.98 | 0.44 | 1.5845061530601E-58 | 5.3388350321205E-54 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TNC | 3371 | 5318 | 1.28 | 0.54 | 0.05 | 3.7463863491995E-97 | 1.2623074164993E-92 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TAGLN | 6876 | 11553 | 1.27 | 0.55 | 0.1 | 8.0277473451709E-56 | 2.7048691904819E-51 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SNAI2 | 6591 | 11094 | 1.25 | 0.63 | 0.09 | 1.1289816143994E-82 | 3.8039906515572E-78 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ACTA2 | 59 | 130 | 1.22 | 0.37 | 0.04 | 8.1370812003548E-50 | 2.7417081396475E-45 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CALD1 | 800 | 1441 | 1.22 | 0.92 | 0.56 | 2.0175868566348E-45 | 6.7980571547451E-41 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MOXD1 | 26002 | 21063 | 1.2 | 0.68 | 0.07 | 1.0344412991937E-110 | 3.4854465135033E-106 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CCL2 | 6347 | 10618 | 1.14 | 0.21 | 0.03 | 1.9123443363182E-22 | 6.4434530067905E-18 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL6A3 | 1293 | 2213 | 1.13 | 0.63 | 0.07 | 2.7504249430248E-90 | 9.2672818030278E-86 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | POSTN | 10631 | 16953 | 1.11 | 0.36 | 0.03 | 8.1048254886238E-68 | 2.7308399001369E-63 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CLDN11 | 5010 | 8514 | 1.1 | 0.59 | 0.11 | 2.5825147953131E-55 | 8.701525351328E-51 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | EMCN | 51705 | 16041 | 1.09 | 0.62 | 0.06 | 6.0279103874931E-105 | 2.0310441259619E-100 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | FBLN5 | 10516 | 3602 | 1.07 | 0.53 | 0.05 | 1.6812254473522E-83 | 5.6647210223087E-79 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | EMILIN1 | 11117 | 19880 | 1.06 | 0.65 | 0.13 | 4.0708046673709E-61 | 1.3716169246239E-56 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ZFP36 | 7538 | 12862 | 1.05 | 0.54 | 0.28 | 2.9942047392175E-16 | 1.0088673448319E-11 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CTSC | 1075 | 2528 | 1.04 | 0.68 | 0.23 | 5.9282673081803E-38 | 1.9974703868183E-33 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | GNAS | 2778 | 4392 | 1.04 | 0.86 | 0.67 | 2.2858304317582E-22 | 7.701877056766E-18 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MGP | 4256 | 7060 | 1.01 | 0.22 | 0.02 | 3.5492749049858E-36 | 1.1958926864859E-31 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SERPINH1 | 871 | 1546 | 1 | 0.89 | 0.54 | 1.2705688799845E-39 | 4.2810547842199E-35 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | AGTR2 | 186 | 338 | 1 | 0.47 | 0.03 | 9.2281414147061E-96 | 3.1093299682711E-91 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MDFI | 4188 | 6967 | 0.97 | 0.53 | 0.04 | 1.4625900407475E-95 | 4.9280508832948E-91 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | GPC3 | 2719 | 4451 | 0.97 | 0.91 | 0.69 | 6.7806249115704E-28 | 2.2846637577045E-23 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | BGN | 633 | 1044 | 0.96 | 0.64 | 0.19 | 2.3262611693268E-37 | 7.8381043839297E-33 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MYH10 | 4628 | 7568 | 0.96 | 0.71 | 0.29 | 3.5096782676385E-35 | 1.1825509954981E-30 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | A2M | 2 | 7 | 0.93 | 0.31 | 0.03 | 1.2921259973651E-46 | 4.3536893355221E-42 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | RBP1 | 5947 | 9919 | 0.92 | 0.86 | 0.45 | 7.7654937080011E-32 | 2.6165054499739E-27 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL21A1 | 81578 | 17025 | 0.91 | 0.45 | 0.04 | 7.305204479896E-81 | 2.4614155974562E-76 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PDGFRA | 5156 | 8803 | 0.91 | 0.48 | 0.05 | 1.4378606595832E-76 | 4.8447277063998E-72 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | C7 | 730 | 1346 | 0.91 | 0.34 | 0.01 | 2.0366174164366E-93 | 6.8621787229415E-89 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MMP2 | 4313 | 7166 | 0.89 | 0.47 | 0.07 | 6.1471393550728E-53 | 2.0712171342982E-48 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | FOS | 2353 | 3796 | 0.89 | 0.84 | 0.65 | 9.7559047678488E-19 | 3.287154552479E-14 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | IGFBP5 | 3488 | 5474 | 0.89 | 0.5 | 0.07 | 1.2908086562728E-55 | 4.3492506864456E-51 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL6A2 | 1292 | 2212 | 0.88 | 0.5 | 0.07 | 1.0311835638217E-58 | 3.4744698999408E-54 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL6A1 | 1291 | 2211 | 0.88 | 0.63 | 0.25 | 2.0845167618799E-27 | 7.0235707774783E-23 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | KCNE4 | 23704 | 6244 | 0.88 | 0.34 | 0.02 | 1.3076625680612E-70 | 4.4060382568253E-66 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | FGF7 | 2252 | 3685 | 0.86 | 0.36 | 0.02 | 9.7563608063746E-90 | 3.2873082100998E-85 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | NFIA | 4774 | 7784 | 0.85 | 0.41 | 0.06 | 8.5691834684827E-50 | 2.8873006778706E-45 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ID2 | 3398 | 5361 | 0.85 | 0.8 | 0.6 | 8.5135978623238E-15 | 2.8685716637314E-10 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CPE | 1363 | 2303 | 0.84 | 0.48 | 0.16 | 5.6743013341753E-23 | 1.911899091537E-18 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CHODL | 140578 | 17807 | 0.83 | 0.26 | 0.04 | 4.594430149685E-28 | 1.5480472946349E-23 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ITM2A | 9452 | 6173 | 0.82 | 0.31 | 0.05 | 6.6361200790101E-30 | 2.2359742994217E-25 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | EDNRA | 1909 | 3179 | 0.82 | 0.44 | 0.06 | 2.2135771928002E-56 | 7.458426993421E-52 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | LRRC17 | 10234 | 16895 | 0.81 | 0.43 | 0.05 | 1.2663949750077E-56 | 4.266991228791E-52 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ENG | 2022 | 3349 | 0.8 | 0.36 | 0.04 | 3.7184277775435E-44 | 1.2528870553655E-39 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TPBG | 7162 | 12004 | 0.79 | 0.42 | 0.1 | 6.0011778508353E-31 | 2.0220368650605E-26 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | FN1 | 2335 | 3778 | 0.79 | 0.53 | 0.08 | 2.2177261785366E-58 | 7.4724065859614E-54 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | RARRES2 | 5919 | 9868 | 0.78 | 0.5 | 0.15 | 2.4538702345364E-27 | 8.2680703682469E-23 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SLC2A3 | 6515 | 11007 | 0.77 | 0.4 | 0.06 | 6.6847937709396E-46 | 2.2523744131804E-41 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PCDH18 | 54510 | 14268 | 0.77 | 0.45 | 0.08 | 9.566253711946E-41 | 3.2232535257031E-36 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | FHL3 | 2275 | 3704 | 0.76 | 0.37 | 0.05 | 3.9438908889602E-48 | 1.3288545961263E-43 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | EBF1 | 1879 | 3126 | 0.76 | 0.31 | 0.03 | 4.0554555847599E-49 | 1.366445204729E-44 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TPM4 | 7171 | 12013 | 0.76 | 0.8 | 0.48 | 7.1746881634241E-24 | 2.4174394297841E-19 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | LDB2 | 9079 | 6533 | 0.75 | 0.44 | 0.05 | 8.2587450403651E-63 | 2.7827015539006E-58 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | COL5A2 | 1290 | 2210 | 0.75 | 0.44 | 0.08 | 3.5588589618188E-42 | 1.1991219385952E-37 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SH3BGRL | 6451 | 10823 | 0.75 | 0.82 | 0.49 | 5.8379016983006E-26 | 1.9670225982254E-21 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | NUPR1 | 26471 | 29990 | 0.74 | 0.36 | 0.01 | 1.5446129993507E-109 | 5.2044190400123E-105 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SNAI1 | 6615 | 11128 | 0.74 | 0.33 | 0.04 | 5.8308191648607E-41 | 1.9646362094081E-36 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PKDCC | 91461 | 25123 | 0.74 | 0.38 | 0.09 | 9.3850104240631E-26 | 3.1621854122838E-21 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | CAVIN1 | 284119 | 9688 | 0.73 | 0.39 | 0.06 | 5.3244152802775E-39 | 1.7940084845367E-34 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MATN2 | 4147 | 6908 | 0.73 | 0.35 | 0.04 | 7.0538316611032E-52 | 2.3767180398921E-47 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | B2M | 567 | 914 | 0.73 | 0.98 | 0.73 | 7.5664400565074E-33 | 2.5494363126396E-28 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | LIMA1 | 51474 | 24636 | 0.73 | 0.37 | 0.09 | 7.8568337853286E-25 | 2.6472815756286E-20 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MARCKS | 4082 | 6759 | 0.72 | 0.8 | 0.52 | 1.5845683847897E-20 | 5.3390447157105E-16 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | TGFB1I1 | 7041 | 11767 | 0.71 | 0.52 | 0.13 | 5.7734465920462E-33 | 1.945305094724E-28 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ISLR | 3671 | 6133 | 0.71 | 0.33 | 0.03 | 2.627192685737E-55 | 8.8520630353222E-51 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MEIS2 | 4212 | 7001 | 0.7 | 0.64 | 0.29 | 1.7289038866034E-21 | 5.8253687555213E-17 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PLK2 | 10769 | 19699 | 0.69 | 0.56 | 0.23 | 4.4695653609255E-20 | 1.5059753527102E-15 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PLSCR1 | 5359 | 9092 | 0.69 | 0.35 | 0.1 | 1.9177674545633E-21 | 6.4617256614056E-17 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | IFI16 | 3428 | 5395 | 0.69 | 0.35 | 0.06 | 3.9220101234593E-34 | 1.3214820909984E-29 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | HOPX | 84525 | 24961 | 0.69 | 0.32 | 0.03 | 4.3208022860281E-51 | 1.4558511222543E-46 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | DNAJB1 | 3337 | 5270 | 0.68 | 0.63 | 0.5 | 1.413834328737E-7 | 0.0047637733872465 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | KCNQ1OT1 | 10984 | 6295 | 0.68 | 0.69 | 0.43 | 1.9548798343195E-15 | 6.5867721137562E-11 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | EPB41L2 | 2037 | 3379 | 0.68 | 0.38 | 0.11 | 1.9119641009376E-21 | 6.4421718416992E-17 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ATP2B1 | 490 | 814 | 0.68 | 0.63 | 0.43 | 1.8840496590391E-12 | 6.3481169211664E-8 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PLAC9 | 219348 | 19255 | 0.68 | 0.36 | 0.03 | 1.4919123500091E-59 | 5.0268494721206E-55 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | AGTR1 | 185 | 336 | 0.68 | 0.26 | 0.02 | 6.5385182702324E-41 | 2.2030883459721E-36 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | ALDH1A2 | 8854 | 15472 | 0.67 | 0.55 | 0.3 | 3.110488187327E-14 | 1.048047889838E-9 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | RPS12 | 6206 | 10385 | 0.67 | 1 | 0.97 | 6.4920005134054E-45 | 2.1874146529868E-40 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | SFRP1 | 6422 | 10776 | 0.67 | 0.29 | 0.05 | 5.9489998209648E-26 | 2.0044559996759E-21 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | PRSS23 | 11098 | 14370 | 0.67 | 0.45 | 0.15 | 3.3681796145057E-19 | 1.1348744393116E-14 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | C12orf57 | 113246 | 29521 | 0.67 | 0.73 | 0.44 | 6.7151217110776E-21 | 2.2625931093305E-16 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | DAAM1 | 23002 | 18142 | 0.67 | 0.45 | 0.19 | 2.7688204337694E-16 | 9.3292635695427E-12 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | HSPA6 | 3310 | 5239 | 0.66 | 0.14 | 0.04 | 2.1367906063524E-7 | 0.0071997022690438 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | STAT3 | 6774 | 11364 | 0.66 | 0.58 | 0.3 | 5.1990883951126E-13 | 1.7517808438492E-8 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | MEIS1 | 4211 | 7000 | 0.66 | 0.53 | 0.16 | 6.6207357809846E-28 | 2.230790714045E-23 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | VCAM1 | 7412 | 12663 | 0.66 | 0.31 | 0.04 | 2.5650921120981E-37 | 8.6428213625033E-33 |
| 75 | 4 | ICa | Interstitial cells a | wk18 | GUCY1A1 | 2982 | 4685 | 0.65 | 0.39 | 0.08 | 3.7233407320355E-31 | 1.2545424262521E-26 |