Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 4 | ICa | Interstitial cells a | wk18 | LGALS1 | 3956 | 6561 | 2.05 | 0.99 | 0.16 | 2.94948446349147e-130 | 9.93799295128815e-126 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL1A2 | 1278 | 2198 | 1.95 | 0.96 | 0.15 | 9.85932162206259e-130 | 3.32199982733777e-125 |
75 | 4 | ICa | Interstitial cells a | wk18 | MFAP4 | 4239 | 7035 | 1.77 | 0.85 | 0.11 | 7.10218305994152e-121 | 2.3930095602167e-116 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL1A1 | 1277 | 2197 | 1.76 | 0.97 | 0.2 | 3.86995921858577e-105 | 1.30394405911029e-100 |
75 | 4 | ICa | Interstitial cells a | wk18 | PCOLCE | 5118 | 8738 | 1.62 | 0.86 | 0.07 | 3.07962652613642e-175 | 1.03764936171641e-170 |
75 | 4 | ICa | Interstitial cells a | wk18 | PTN | 5764 | 9630 | 1.53 | 0.76 | 0.32 | 1.08699432660065e-40 | 3.66251868404823e-36 |
75 | 4 | ICa | Interstitial cells a | wk18 | CYP1B1 | 1545 | 2597 | 1.5 | 0.63 | 0.11 | 1.01626685044385e-66 | 3.42420952588551e-62 |
75 | 4 | ICa | Interstitial cells a | wk18 | TPM2 | 7169 | 12011 | 1.47 | 0.82 | 0.21 | 2.58225149156453e-71 | 8.70063817567752e-67 |
75 | 4 | ICa | Interstitial cells a | wk18 | MEG3 | 55384 | 14575 | 1.47 | 0.84 | 0.12 | 1.38931926743702e-105 | 4.68117233970229e-101 |
75 | 4 | ICa | Interstitial cells a | wk18 | OLFML3 | 56944 | 24956 | 1.41 | 0.71 | 0.07 | 2.57548580406255e-120 | 8.67784186820837e-116 |
75 | 4 | ICa | Interstitial cells a | wk18 | TGFBI | 7045 | 11771 | 1.4 | 0.63 | 0.06 | 2.05802478304253e-104 | 6.9343087039835e-100 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL3A1 | 1281 | 2201 | 1.36 | 0.96 | 0.39 | 7.44949896357344e-55 | 2.51003418078644e-50 |
75 | 4 | ICa | Interstitial cells a | wk18 | SULT1E1 | 6783 | 11377 | 1.36 | 0.61 | 0.11 | 6.26429387758576e-57 | 2.11069117911375e-52 |
75 | 4 | ICa | Interstitial cells a | wk18 | IGF2 | 3481 | 5466 | 1.34 | 0.98 | 0.44 | 1.58450615306005e-58 | 5.33883503212055e-54 |
75 | 4 | ICa | Interstitial cells a | wk18 | TNC | 3371 | 5318 | 1.28 | 0.54 | 0.05 | 3.74638634919952e-97 | 1.26230741649929e-92 |
75 | 4 | ICa | Interstitial cells a | wk18 | TAGLN | 6876 | 11553 | 1.27 | 0.55 | 0.1 | 8.02774734517094e-56 | 2.7048691904819e-51 |
75 | 4 | ICa | Interstitial cells a | wk18 | SNAI2 | 6591 | 11094 | 1.25 | 0.63 | 0.09 | 1.12898161439935e-82 | 3.80399065155717e-78 |
75 | 4 | ICa | Interstitial cells a | wk18 | ACTA2 | 59 | 130 | 1.22 | 0.37 | 0.04 | 8.13708120035479e-50 | 2.74170813964754e-45 |
75 | 4 | ICa | Interstitial cells a | wk18 | CALD1 | 800 | 1441 | 1.22 | 0.92 | 0.56 | 2.01758685663475e-45 | 6.79805715474512e-41 |
75 | 4 | ICa | Interstitial cells a | wk18 | MOXD1 | 26002 | 21063 | 1.2 | 0.68 | 0.07 | 1.03444129919372e-110 | 3.48544651350332e-106 |
75 | 4 | ICa | Interstitial cells a | wk18 | CCL2 | 6347 | 10618 | 1.14 | 0.21 | 0.03 | 1.91234433631819e-22 | 6.4434530067905e-18 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL6A3 | 1293 | 2213 | 1.13 | 0.63 | 0.07 | 2.75042494302481e-90 | 9.2672818030278e-86 |
75 | 4 | ICa | Interstitial cells a | wk18 | POSTN | 10631 | 16953 | 1.11 | 0.36 | 0.03 | 8.10482548862383e-68 | 2.73083990013691e-63 |
75 | 4 | ICa | Interstitial cells a | wk18 | CLDN11 | 5010 | 8514 | 1.1 | 0.59 | 0.11 | 2.58251479531313e-55 | 8.70152535132805e-51 |
75 | 4 | ICa | Interstitial cells a | wk18 | EMCN | 51705 | 16041 | 1.09 | 0.62 | 0.06 | 6.02791038749313e-105 | 2.03104412596193e-100 |
75 | 4 | ICa | Interstitial cells a | wk18 | FBLN5 | 10516 | 3602 | 1.07 | 0.53 | 0.05 | 1.68122544735225e-83 | 5.66472102230867e-79 |
75 | 4 | ICa | Interstitial cells a | wk18 | EMILIN1 | 11117 | 19880 | 1.06 | 0.65 | 0.13 | 4.07080466737088e-61 | 1.37161692462395e-56 |
75 | 4 | ICa | Interstitial cells a | wk18 | ZFP36 | 7538 | 12862 | 1.05 | 0.54 | 0.28 | 2.99420473921746e-16 | 1.00886734483193e-11 |
75 | 4 | ICa | Interstitial cells a | wk18 | CTSC | 1075 | 2528 | 1.04 | 0.68 | 0.23 | 5.9282673081803e-38 | 1.99747038681827e-33 |
75 | 4 | ICa | Interstitial cells a | wk18 | GNAS | 2778 | 4392 | 1.04 | 0.86 | 0.67 | 2.28583043175817e-22 | 7.70187705676597e-18 |
75 | 4 | ICa | Interstitial cells a | wk18 | MGP | 4256 | 7060 | 1.01 | 0.22 | 0.02 | 3.54927490498584e-36 | 1.19589268648593e-31 |
75 | 4 | ICa | Interstitial cells a | wk18 | SERPINH1 | 871 | 1546 | 1 | 0.89 | 0.54 | 1.27056887998455e-39 | 4.28105478421994e-35 |
75 | 4 | ICa | Interstitial cells a | wk18 | AGTR2 | 186 | 338 | 1 | 0.47 | 0.03 | 9.22814141470612e-96 | 3.10932996827108e-91 |
75 | 4 | ICa | Interstitial cells a | wk18 | MDFI | 4188 | 6967 | 0.97 | 0.53 | 0.04 | 1.46259004074754e-95 | 4.92805088329477e-91 |
75 | 4 | ICa | Interstitial cells a | wk18 | GPC3 | 2719 | 4451 | 0.97 | 0.91 | 0.69 | 6.78062491157041e-28 | 2.28466375770453e-23 |
75 | 4 | ICa | Interstitial cells a | wk18 | BGN | 633 | 1044 | 0.96 | 0.64 | 0.19 | 2.32626116932679e-37 | 7.83810438392969e-33 |
75 | 4 | ICa | Interstitial cells a | wk18 | MYH10 | 4628 | 7568 | 0.96 | 0.71 | 0.29 | 3.50967826763849e-35 | 1.18255099549811e-30 |
75 | 4 | ICa | Interstitial cells a | wk18 | A2M | 2 | 7 | 0.93 | 0.31 | 0.03 | 1.29212599736514e-46 | 4.35368933552209e-42 |
75 | 4 | ICa | Interstitial cells a | wk18 | RBP1 | 5947 | 9919 | 0.92 | 0.86 | 0.45 | 7.76549370800112e-32 | 2.6165054499739e-27 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL21A1 | 81578 | 17025 | 0.91 | 0.45 | 0.04 | 7.30520447989601e-81 | 2.46141559745616e-76 |
75 | 4 | ICa | Interstitial cells a | wk18 | PDGFRA | 5156 | 8803 | 0.91 | 0.48 | 0.05 | 1.43786065958325e-76 | 4.84472770639979e-72 |
75 | 4 | ICa | Interstitial cells a | wk18 | C7 | 730 | 1346 | 0.91 | 0.34 | 0.01 | 2.03661741643662e-93 | 6.86217872294153e-89 |
75 | 4 | ICa | Interstitial cells a | wk18 | MMP2 | 4313 | 7166 | 0.89 | 0.47 | 0.07 | 6.14713935507275e-53 | 2.07121713429821e-48 |
75 | 4 | ICa | Interstitial cells a | wk18 | FOS | 2353 | 3796 | 0.89 | 0.84 | 0.65 | 9.75590476784883e-19 | 3.28715455247899e-14 |
75 | 4 | ICa | Interstitial cells a | wk18 | IGFBP5 | 3488 | 5474 | 0.89 | 0.5 | 0.07 | 1.2908086562728e-55 | 4.34925068644559e-51 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL6A2 | 1292 | 2212 | 0.88 | 0.5 | 0.07 | 1.0311835638217e-58 | 3.47446989994085e-54 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL6A1 | 1291 | 2211 | 0.88 | 0.63 | 0.25 | 2.08451676187995e-27 | 7.02357077747831e-23 |
75 | 4 | ICa | Interstitial cells a | wk18 | KCNE4 | 23704 | 6244 | 0.88 | 0.34 | 0.02 | 1.30766256806117e-70 | 4.40603825682529e-66 |
75 | 4 | ICa | Interstitial cells a | wk18 | FGF7 | 2252 | 3685 | 0.86 | 0.36 | 0.02 | 9.75636080637456e-90 | 3.28730821009984e-85 |
75 | 4 | ICa | Interstitial cells a | wk18 | NFIA | 4774 | 7784 | 0.85 | 0.41 | 0.06 | 8.56918346848271e-50 | 2.88730067787056e-45 |
75 | 4 | ICa | Interstitial cells a | wk18 | ID2 | 3398 | 5361 | 0.85 | 0.8 | 0.6 | 8.51359786232381e-15 | 2.86857166373138e-10 |
75 | 4 | ICa | Interstitial cells a | wk18 | CPE | 1363 | 2303 | 0.84 | 0.48 | 0.16 | 5.67430133417525e-23 | 1.91189909153701e-18 |
75 | 4 | ICa | Interstitial cells a | wk18 | CHODL | 140578 | 17807 | 0.83 | 0.26 | 0.04 | 4.59443014968498e-28 | 1.54804729463486e-23 |
75 | 4 | ICa | Interstitial cells a | wk18 | ITM2A | 9452 | 6173 | 0.82 | 0.31 | 0.05 | 6.63612007901011e-30 | 2.23597429942167e-25 |
75 | 4 | ICa | Interstitial cells a | wk18 | EDNRA | 1909 | 3179 | 0.82 | 0.44 | 0.06 | 2.21357719280019e-56 | 7.45842699342097e-52 |
75 | 4 | ICa | Interstitial cells a | wk18 | LRRC17 | 10234 | 16895 | 0.81 | 0.43 | 0.05 | 1.26639497500771e-56 | 4.26699122879098e-52 |
75 | 4 | ICa | Interstitial cells a | wk18 | ENG | 2022 | 3349 | 0.8 | 0.36 | 0.04 | 3.71842777754347e-44 | 1.2528870553655e-39 |
75 | 4 | ICa | Interstitial cells a | wk18 | TPBG | 7162 | 12004 | 0.79 | 0.42 | 0.1 | 6.00117785083535e-31 | 2.02203686506046e-26 |
75 | 4 | ICa | Interstitial cells a | wk18 | FN1 | 2335 | 3778 | 0.79 | 0.53 | 0.08 | 2.21772617853665e-58 | 7.47240658596138e-54 |
75 | 4 | ICa | Interstitial cells a | wk18 | RARRES2 | 5919 | 9868 | 0.78 | 0.5 | 0.15 | 2.45387023453638e-27 | 8.26807036824687e-23 |
75 | 4 | ICa | Interstitial cells a | wk18 | SLC2A3 | 6515 | 11007 | 0.77 | 0.4 | 0.06 | 6.68479377093963e-46 | 2.2523744131804e-41 |
75 | 4 | ICa | Interstitial cells a | wk18 | PCDH18 | 54510 | 14268 | 0.77 | 0.45 | 0.08 | 9.56625371194599e-41 | 3.22325352570308e-36 |
75 | 4 | ICa | Interstitial cells a | wk18 | FHL3 | 2275 | 3704 | 0.76 | 0.37 | 0.05 | 3.94389088896022e-48 | 1.32885459612626e-43 |
75 | 4 | ICa | Interstitial cells a | wk18 | EBF1 | 1879 | 3126 | 0.76 | 0.31 | 0.03 | 4.05545558475992e-49 | 1.36644520472901e-44 |
75 | 4 | ICa | Interstitial cells a | wk18 | TPM4 | 7171 | 12013 | 0.76 | 0.8 | 0.48 | 7.17468816342413e-24 | 2.41743942978413e-19 |
75 | 4 | ICa | Interstitial cells a | wk18 | LDB2 | 9079 | 6533 | 0.75 | 0.44 | 0.05 | 8.25874504036506e-63 | 2.7827015539006e-58 |
75 | 4 | ICa | Interstitial cells a | wk18 | COL5A2 | 1290 | 2210 | 0.75 | 0.44 | 0.08 | 3.55885896181884e-42 | 1.19912193859524e-37 |
75 | 4 | ICa | Interstitial cells a | wk18 | SH3BGRL | 6451 | 10823 | 0.75 | 0.82 | 0.49 | 5.83790169830055e-26 | 1.96702259822539e-21 |
75 | 4 | ICa | Interstitial cells a | wk18 | NUPR1 | 26471 | 29990 | 0.74 | 0.36 | 0.01 | 1.54461299935071e-109 | 5.20441904001228e-105 |
75 | 4 | ICa | Interstitial cells a | wk18 | SNAI1 | 6615 | 11128 | 0.74 | 0.33 | 0.04 | 5.83081916486066e-41 | 1.96463620940815e-36 |
75 | 4 | ICa | Interstitial cells a | wk18 | PKDCC | 91461 | 25123 | 0.74 | 0.38 | 0.09 | 9.38501042406311e-26 | 3.16218541228383e-21 |
75 | 4 | ICa | Interstitial cells a | wk18 | CAVIN1 | 284119 | 9688 | 0.73 | 0.39 | 0.06 | 5.32441528027746e-39 | 1.79400848453669e-34 |
75 | 4 | ICa | Interstitial cells a | wk18 | MATN2 | 4147 | 6908 | 0.73 | 0.35 | 0.04 | 7.05383166110319e-52 | 2.37671803989211e-47 |
75 | 4 | ICa | Interstitial cells a | wk18 | B2M | 567 | 914 | 0.73 | 0.98 | 0.73 | 7.56644005650741e-33 | 2.54943631263961e-28 |
75 | 4 | ICa | Interstitial cells a | wk18 | LIMA1 | 51474 | 24636 | 0.73 | 0.37 | 0.09 | 7.85683378532861e-25 | 2.64728157562862e-20 |
75 | 4 | ICa | Interstitial cells a | wk18 | MARCKS | 4082 | 6759 | 0.72 | 0.8 | 0.52 | 1.58456838478973e-20 | 5.33904471571051e-16 |
75 | 4 | ICa | Interstitial cells a | wk18 | TGFB1I1 | 7041 | 11767 | 0.71 | 0.52 | 0.13 | 5.77344659204622e-33 | 1.94530509472405e-28 |
75 | 4 | ICa | Interstitial cells a | wk18 | ISLR | 3671 | 6133 | 0.71 | 0.33 | 0.03 | 2.627192685737e-55 | 8.85206303532223e-51 |
75 | 4 | ICa | Interstitial cells a | wk18 | MEIS2 | 4212 | 7001 | 0.7 | 0.64 | 0.29 | 1.72890388660335e-21 | 5.82536875552134e-17 |
75 | 4 | ICa | Interstitial cells a | wk18 | PLK2 | 10769 | 19699 | 0.69 | 0.56 | 0.23 | 4.46956536092547e-20 | 1.50597535271023e-15 |
75 | 4 | ICa | Interstitial cells a | wk18 | PLSCR1 | 5359 | 9092 | 0.69 | 0.35 | 0.1 | 1.91776745456329e-21 | 6.46172566140556e-17 |
75 | 4 | ICa | Interstitial cells a | wk18 | IFI16 | 3428 | 5395 | 0.69 | 0.35 | 0.06 | 3.92201012345932e-34 | 1.32148209099838e-29 |
75 | 4 | ICa | Interstitial cells a | wk18 | HOPX | 84525 | 24961 | 0.69 | 0.32 | 0.03 | 4.32080228602812e-51 | 1.45585112225432e-46 |
75 | 4 | ICa | Interstitial cells a | wk18 | DNAJB1 | 3337 | 5270 | 0.68 | 0.63 | 0.5 | 1.41383432873702e-07 | 0.00476377338724652 |
75 | 4 | ICa | Interstitial cells a | wk18 | KCNQ1OT1 | 10984 | 6295 | 0.68 | 0.69 | 0.43 | 1.95487983431952e-15 | 6.58677211375619e-11 |
75 | 4 | ICa | Interstitial cells a | wk18 | EPB41L2 | 2037 | 3379 | 0.68 | 0.38 | 0.11 | 1.91196410093763e-21 | 6.44217184169925e-17 |
75 | 4 | ICa | Interstitial cells a | wk18 | ATP2B1 | 490 | 814 | 0.68 | 0.63 | 0.43 | 1.88404965903913e-12 | 6.34811692116644e-08 |
75 | 4 | ICa | Interstitial cells a | wk18 | PLAC9 | 219348 | 19255 | 0.68 | 0.36 | 0.03 | 1.4919123500091e-59 | 5.02684947212065e-55 |
75 | 4 | ICa | Interstitial cells a | wk18 | AGTR1 | 185 | 336 | 0.68 | 0.26 | 0.02 | 6.53851827023238e-41 | 2.2030883459721e-36 |
75 | 4 | ICa | Interstitial cells a | wk18 | ALDH1A2 | 8854 | 15472 | 0.67 | 0.55 | 0.3 | 3.11048818732702e-14 | 1.04804788983797e-09 |
75 | 4 | ICa | Interstitial cells a | wk18 | RPS12 | 6206 | 10385 | 0.67 | 1 | 0.97 | 6.49200051340537e-45 | 2.1874146529868e-40 |
75 | 4 | ICa | Interstitial cells a | wk18 | SFRP1 | 6422 | 10776 | 0.67 | 0.29 | 0.05 | 5.9489998209648e-26 | 2.00445599967588e-21 |
75 | 4 | ICa | Interstitial cells a | wk18 | PRSS23 | 11098 | 14370 | 0.67 | 0.45 | 0.15 | 3.36817961450574e-19 | 1.13487443931156e-14 |
75 | 4 | ICa | Interstitial cells a | wk18 | C12orf57 | 113246 | 29521 | 0.67 | 0.73 | 0.44 | 6.71512171107763e-21 | 2.2625931093305e-16 |
75 | 4 | ICa | Interstitial cells a | wk18 | DAAM1 | 23002 | 18142 | 0.67 | 0.45 | 0.19 | 2.76882043376943e-16 | 9.32926356954273e-12 |
75 | 4 | ICa | Interstitial cells a | wk18 | HSPA6 | 3310 | 5239 | 0.66 | 0.14 | 0.04 | 2.1367906063524e-07 | 0.00719970226904377 |
75 | 4 | ICa | Interstitial cells a | wk18 | STAT3 | 6774 | 11364 | 0.66 | 0.58 | 0.3 | 5.19908839511255e-13 | 1.75178084384922e-08 |
75 | 4 | ICa | Interstitial cells a | wk18 | MEIS1 | 4211 | 7000 | 0.66 | 0.53 | 0.16 | 6.62073578098459e-28 | 2.23079071404495e-23 |
75 | 4 | ICa | Interstitial cells a | wk18 | VCAM1 | 7412 | 12663 | 0.66 | 0.31 | 0.04 | 2.56509211209808e-37 | 8.64282136250326e-33 |
75 | 4 | ICa | Interstitial cells a | wk18 | GUCY1A1 | 2982 | 4685 | 0.65 | 0.39 | 0.08 | 3.72334073203554e-31 | 1.25454242625206e-26 |