Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 3 | ErPrT | Early proximal tubule | wk18 | APOE | 348 | 613 | 2.69 | 0.99 | 0.19 | 4.14743371206894e-225 | 1.39743631494451e-220 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | APOA1 | 335 | 600 | 2.54 | 0.6 | 0.03 | 4.00884246952484e-215 | 1.3507393816817e-210 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SMIM24 | 284422 | 37244 | 2.2 | 0.98 | 0.07 | 0 | 0 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | APOM | 55937 | 13916 | 1.99 | 0.79 | 0.05 | 4.39525969277136e-276 | 1.48093880088238e-271 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | LINC01781 | 101927412 | 52571 | 1.83 | 0.82 | 0.05 | 3.32788879736228e-286 | 1.12129885138325e-281 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | FTL | 2512 | 3999 | 1.75 | 1 | 0.97 | 1.18757736127005e-133 | 4.00142316106329e-129 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | FXYD2 | 486 | 4026 | 1.62 | 0.94 | 0.12 | 2.88436138494529e-220 | 9.71856725043465e-216 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GPX3 | 2878 | 4555 | 1.59 | 0.81 | 0.16 | 1.75434417576268e-143 | 5.91108726581476e-139 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SPP1 | 6696 | 11255 | 1.57 | 0.49 | 0.06 | 5.23447069760109e-98 | 1.76370255684971e-93 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CUBN | 8029 | 2548 | 1.49 | 0.79 | 0.02 | 0 | 0 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GLYATL1 | 92292 | 30519 | 1.47 | 0.65 | 0.04 | 4.15164133454966e-229 | 1.39885403126316e-224 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | AMN | 81693 | 14604 | 1.44 | 0.78 | 0.03 | 0 | 0 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | KLF6 | 1316 | 2235 | 1.42 | 0.84 | 0.42 | 3.14101155923527e-66 | 1.05833243476873e-61 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | PDZK1 | 5174 | 8821 | 1.41 | 0.82 | 0.07 | 5.14721680493039e-234 | 1.73430323025325e-229 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DSEL | 92126 | 18144 | 1.4 | 0.8 | 0.09 | 4.35912674359524e-198 | 1.46876416498698e-193 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC3A1 | 6519 | 11025 | 1.33 | 0.76 | 0.03 | 0 | 0 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | AKR1C3 | 8644 | 386 | 1.31 | 0.71 | 0.04 | 7.72685114355874e-247 | 2.60348522431068e-242 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | MPC2 | 25874 | 24515 | 1.3 | 0.97 | 0.41 | 2.07180686243232e-118 | 6.98074604227947e-114 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | RIDA | 10247 | 16897 | 1.29 | 0.82 | 0.17 | 5.93932526910712e-138 | 2.00119625617295e-133 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | C1QTNF3 | 114899 | 14326 | 1.27 | 0.61 | 0.12 | 3.62609898476049e-98 | 1.2217777919252e-93 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ACAA2 | 10449 | 83 | 1.25 | 0.87 | 0.32 | 4.91242189087188e-97 | 1.65519143191037e-92 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GATM | 2628 | 4175 | 1.23 | 0.58 | 0.06 | 2.23640948327404e-139 | 7.53535811294356e-135 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ETFB | 2109 | 3482 | 1.23 | 0.92 | 0.41 | 9.48837297807198e-99 | 3.19701239123157e-94 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SERPINF1 | 5176 | 8824 | 1.19 | 0.71 | 0.09 | 7.94426791107469e-151 | 2.67674162995751e-146 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | BHMT | 635 | 1047 | 1.18 | 0.55 | 0.02 | 9.63908490020977e-204 | 3.24779326627668e-199 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CARMIL1 | 55604 | 21581 | 1.16 | 0.59 | 0.09 | 1.6347790438468e-113 | 5.50822451033741e-109 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | MT1G | 4495 | 7399 | 1.15 | 0.11 | 0.005 | 1.33690359441422e-44 | 4.50456297101928e-40 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | UGT3A1 | 133688 | 26625 | 1.15 | 0.63 | 0.05 | 1.89933475986368e-186 | 6.39961853988467e-182 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CEBPD | 1052 | 1835 | 1.15 | 0.87 | 0.27 | 9.30213450441187e-96 | 3.13426119991654e-91 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | MSRB1 | 51734 | 14133 | 1.14 | 0.84 | 0.21 | 2.19488963692404e-115 | 7.39546114265186e-111 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP1B1 | 481 | 804 | 1.13 | 0.77 | 0.25 | 5.43951219181907e-81 | 1.83278923791152e-76 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GK | 2710 | 4289 | 1.12 | 0.71 | 0.11 | 1.79698136633508e-141 | 6.05474901572943e-137 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | LGALS2 | 3957 | 6562 | 1.11 | 0.66 | 0.04 | 1.25723507400508e-205 | 4.2361278583527e-201 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM176A | 55365 | 24930 | 1.11 | 0.6 | 0.05 | 8.8060279132231e-167 | 2.96710304508139e-162 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CA2 | 760 | 1373 | 1.1 | 0.65 | 0.13 | 2.11421476412789e-91 | 7.1236352262525e-87 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | PSMA2 | 5683 | 9531 | 1.09 | 0.93 | 0.74 | 4.0591305260497e-39 | 1.36768343944719e-34 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DBI | 1622 | 2690 | 1.08 | 0.91 | 0.44 | 1.84106202538133e-84 | 6.20327438831985e-80 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GLYAT | 10249 | 13734 | 1.08 | 0.63 | 0.009 | 0 | 0 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | C11orf54 | 28970 | 30204 | 1.07 | 0.75 | 0.23 | 2.48051723764199e-81 | 8.35785478051091e-77 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DAB2 | 1601 | 2662 | 1.06 | 0.92 | 0.3 | 1.14629725097548e-100 | 3.86233395743677e-96 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | S100A10 | 6281 | 10487 | 1.05 | 0.88 | 0.27 | 3.97965279343639e-94 | 1.34090421222046e-89 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC5A8 | 160728 | 19119 | 1.04 | 0.54 | 0.02 | 5.68243541226215e-230 | 1.91463978780761e-225 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GLS | 2744 | 4331 | 1.04 | 0.77 | 0.21 | 2.26741607868183e-91 | 7.63983173551055e-87 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GCHFR | 2644 | 4194 | 1.04 | 0.68 | 0.13 | 2.5400265651897e-107 | 8.55836550875018e-103 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ANXA4 | 307 | 542 | 1.03 | 0.75 | 0.25 | 7.03825828572721e-75 | 2.37147074679293e-70 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CHCHD10 | 400916 | 15559 | 1.02 | 0.8 | 0.23 | 5.16920405902206e-90 | 1.74171161564689e-85 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ELF3 | 1999 | 3318 | 1.02 | 0.69 | 0.11 | 2.8865843671408e-119 | 9.7260573666442e-115 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CYB5A | 1528 | 2570 | 1.02 | 0.87 | 0.38 | 3.8127404575446e-74 | 1.28466476976508e-69 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | TGIF1 | 7050 | 11776 | 1.01 | 0.9 | 0.32 | 2.65135650059346e-89 | 8.93348059309959e-85 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP5IF1 | 93974 | 871 | 0.99 | 0.98 | 0.77 | 4.21107975787165e-82 | 1.41888121361727e-77 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DNPH1 | 10591 | 21218 | 0.98 | 0.85 | 0.39 | 2.75213563501144e-74 | 9.27304580860753e-70 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | LRP2 | 4036 | 6694 | 0.98 | 0.59 | 0.06 | 4.4706078784235e-147 | 1.50632661855601e-142 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ALDH1A1 | 216 | 402 | 0.97 | 0.65 | 0.15 | 1.22369353978089e-87 | 4.12311301293774e-83 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | GNG11 | 2791 | 4403 | 0.97 | 0.8 | 0.18 | 4.49951656902941e-108 | 1.51606711276877e-103 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | KCNJ15 | 3772 | 6261 | 0.97 | 0.52 | 0.03 | 3.42865846202702e-168 | 1.15525218219538e-163 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC13A1 | 6561 | 10916 | 0.97 | 0.5 | 0.01 | 1.04141738610911e-223 | 3.50895174075602e-219 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | VMP1 | 81671 | 29559 | 0.96 | 0.75 | 0.34 | 1.12107809283522e-49 | 3.77736052599898e-45 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP6V1F | 9296 | 16832 | 0.96 | 0.92 | 0.49 | 3.2705805989743e-73 | 1.1019894270184e-68 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC39A4 | 55630 | 17129 | 0.96 | 0.62 | 0.13 | 4.83435830348213e-91 | 1.62888868677527e-86 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ADAMTS9-AS1 | 101929335 | 40625 | 0.95 | 0.57 | 0.04 | 1.2558242209978e-179 | 4.23137413022998e-175 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CRYL1 | 51084 | 18246 | 0.95 | 0.67 | 0.12 | 6.93088633595714e-111 | 2.3352928420374e-106 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ND3 | 4537 | 7458 | 0.95 | 0.97 | 0.76 | 2.42123737247244e-74 | 8.15811720280862e-70 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | PCSK1N | 27344 | 17301 | 0.93 | 0.61 | 0.15 | 5.81446240365667e-71 | 1.95912496228808e-66 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | VCAN | 1462 | 2464 | 0.93 | 0.86 | 0.31 | 1.46605847614799e-73 | 4.93973742953304e-69 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | UGCG | 7357 | 12524 | 0.93 | 0.73 | 0.22 | 5.82662587275439e-73 | 1.96322332156586e-68 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ND1 | 4535 | 7455 | 0.93 | 0.99 | 0.91 | 2.54950677455659e-82 | 8.59030812619096e-78 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ALDH6A1 | 4329 | 7179 | 0.92 | 0.78 | 0.24 | 4.80628670532209e-79 | 1.61943024249122e-74 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CREB5 | 9586 | 16844 | 0.91 | 0.57 | 0.06 | 1.11031116842264e-142 | 3.74108245088323e-138 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | KRT8 | 3856 | 6446 | 0.91 | 0.74 | 0.18 | 3.45574078469334e-88 | 1.16437729999458e-83 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | HPN | 3249 | 5155 | 0.91 | 0.53 | 0.03 | 1.66610276653436e-189 | 5.61376666156087e-185 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | HSPE1 | 3336 | 5269 | 0.91 | 0.97 | 0.74 | 5.54850165541007e-63 | 1.86951214777387e-58 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | AFP | 174 | 317 | 0.91 | 0.37 | 0.007 | 9.5967240797307e-191 | 3.23352021142446e-186 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM176B | 28959 | 29596 | 0.9 | 0.65 | 0.08 | 2.31192133965624e-131 | 7.78978776183773e-127 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CYBA | 1535 | 2577 | 0.9 | 0.84 | 0.39 | 2.55191982485889e-61 | 8.59843865787955e-57 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | AIG1 | 51390 | 21607 | 0.89 | 0.78 | 0.28 | 3.43472985828933e-67 | 1.15729787845201e-62 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | COX3 | 4514 | 7422 | 0.89 | 0.99 | 0.99 | 5.27487771191856e-100 | 1.77731729625384e-95 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC16A4 | 9122 | 10925 | 0.89 | 0.49 | 0.04 | 2.38284818249541e-143 | 8.02876866610003e-139 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | AKR1A1 | 10327 | 380 | 0.88 | 0.87 | 0.46 | 3.11811426289776e-61 | 1.05061741974077e-56 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | FLRT3 | 23767 | 3762 | 0.88 | 0.72 | 0.23 | 5.66497716280413e-64 | 1.90875740523522e-59 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | TUBB4B | 10383 | 20771 | 0.87 | 0.94 | 0.67 | 9.08109675144982e-58 | 3.0597847394335e-53 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DDC | 1644 | 2719 | 0.86 | 0.47 | 0.04 | 8.31220766783822e-121 | 2.80071525160141e-116 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | IGFBP7 | 3490 | 5476 | 0.85 | 0.98 | 0.61 | 2.512065543961e-49 | 8.46415364382218e-45 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP6 | 4508 | 7414 | 0.84 | 0.99 | 0.97 | 6.23197436914578e-77 | 2.09980144393998e-72 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | KRT18 | 3875 | 6430 | 0.84 | 0.83 | 0.31 | 1.18539128610298e-65 | 3.99405739939537e-61 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | UGT2A3 | 79799 | 28528 | 0.84 | 0.37 | 0.01 | 6.60221796478311e-141 | 2.22455132105402e-136 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ND4 | 4538 | 7459 | 0.84 | 0.99 | 0.99 | 5.76454837817217e-92 | 1.94230693054133e-87 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | DPYS | 1807 | 3013 | 0.84 | 0.44 | 0.01 | 2.31342809096217e-209 | 7.79486460968793e-205 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | NAT8 | 9027 | 18069 | 0.84 | 0.34 | 0.006 | 1.31479541450376e-175 | 4.43007166962897e-171 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM256 | 254863 | 28618 | 0.84 | 0.77 | 0.29 | 1.0787203064394e-63 | 3.6346402005169e-59 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | FABP1 | 2168 | 3555 | 0.83 | 0.38 | 0.004 | 1.93955420057518e-214 | 6.535133923418e-210 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CDH6 | 1004 | 1765 | 0.83 | 0.7 | 0.2 | 4.12798679778117e-69 | 1.39088387164439e-64 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC39A5 | 283375 | 20502 | 0.83 | 0.48 | 0.02 | 6.44911637081983e-193 | 2.17296526998403e-188 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | PHGDH | 26227 | 8923 | 0.82 | 0.77 | 0.31 | 2.0670648521329e-49 | 6.96476831277658e-45 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | ASRGL1 | 80150 | 16448 | 0.82 | 0.58 | 0.13 | 8.43907224327644e-77 | 2.84346100164956e-72 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC44A4 | 80736 | 13941 | 0.82 | 0.47 | 0.04 | 1.22646329665152e-120 | 4.13244543173762e-116 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | BNIP3 | 664 | 1084 | 0.82 | 0.75 | 0.31 | 1.4074945328444e-50 | 4.74241207896591e-46 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | PTGR1 | 22949 | 18429 | 0.81 | 0.79 | 0.44 | 1.57948874683222e-42 | 5.32192938357648e-38 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CLU | 1191 | 2095 | 0.81 | 0.69 | 0.23 | 8.19365712037982e-57 | 2.76077083014078e-52 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC27A2 | 11001 | 10996 | 0.8 | 0.47 | 0.06 | 2.53940815634678e-96 | 8.55628184199484e-92 |
75 | 3 | ErPrT | Early proximal tubule | wk18 | CLEC18B | 497190 | 33849 | 0.8 | 0.62 | 0.16 | 3.38770300544412e-69 | 1.14145265065434e-64 |