Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | APOE | 348 | 613 | 2.69 | 0.99 | 0.19 | 4.1474337120689E-225 | 1.3974363149445E-220 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | APOA1 | 335 | 600 | 2.54 | 0.6 | 0.03 | 4.0088424695248E-215 | 1.3507393816817E-210 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SMIM24 | 284422 | 37244 | 2.2 | 0.98 | 0.07 | 0 | 0 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | APOM | 55937 | 13916 | 1.99 | 0.79 | 0.05 | 4.3952596927714E-276 | 1.4809388008824E-271 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | LINC01781 | 101927412 | 52571 | 1.83 | 0.82 | 0.05 | 3.3278887973623E-286 | 1.1212988513832E-281 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | FTL | 2512 | 3999 | 1.75 | 1 | 0.97 | 1.18757736127E-133 | 4.0014231610633E-129 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | FXYD2 | 486 | 4026 | 1.62 | 0.94 | 0.12 | 2.8843613849453E-220 | 9.7185672504346E-216 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GPX3 | 2878 | 4555 | 1.59 | 0.81 | 0.16 | 1.7543441757627E-143 | 5.9110872658148E-139 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SPP1 | 6696 | 11255 | 1.57 | 0.49 | 0.06 | 5.2344706976011E-98 | 1.7637025568497E-93 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CUBN | 8029 | 2548 | 1.49 | 0.79 | 0.02 | 0 | 0 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GLYATL1 | 92292 | 30519 | 1.47 | 0.65 | 0.04 | 4.1516413345497E-229 | 1.3988540312632E-224 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | AMN | 81693 | 14604 | 1.44 | 0.78 | 0.03 | 0 | 0 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | KLF6 | 1316 | 2235 | 1.42 | 0.84 | 0.42 | 3.1410115592353E-66 | 1.0583324347687E-61 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | PDZK1 | 5174 | 8821 | 1.41 | 0.82 | 0.07 | 5.1472168049304E-234 | 1.7343032302532E-229 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DSEL | 92126 | 18144 | 1.4 | 0.8 | 0.09 | 4.3591267435952E-198 | 1.468764164987E-193 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC3A1 | 6519 | 11025 | 1.33 | 0.76 | 0.03 | 0 | 0 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | AKR1C3 | 8644 | 386 | 1.31 | 0.71 | 0.04 | 7.7268511435587E-247 | 2.6034852243107E-242 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | MPC2 | 25874 | 24515 | 1.3 | 0.97 | 0.41 | 2.0718068624323E-118 | 6.9807460422795E-114 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | RIDA | 10247 | 16897 | 1.29 | 0.82 | 0.17 | 5.9393252691071E-138 | 2.001196256173E-133 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | C1QTNF3 | 114899 | 14326 | 1.27 | 0.61 | 0.12 | 3.6260989847605E-98 | 1.2217777919252E-93 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ACAA2 | 10449 | 83 | 1.25 | 0.87 | 0.32 | 4.9124218908719E-97 | 1.6551914319104E-92 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GATM | 2628 | 4175 | 1.23 | 0.58 | 0.06 | 2.236409483274E-139 | 7.5353581129436E-135 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ETFB | 2109 | 3482 | 1.23 | 0.92 | 0.41 | 9.488372978072E-99 | 3.1970123912316E-94 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SERPINF1 | 5176 | 8824 | 1.19 | 0.71 | 0.09 | 7.9442679110747E-151 | 2.6767416299575E-146 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | BHMT | 635 | 1047 | 1.18 | 0.55 | 0.02 | 9.6390849002098E-204 | 3.2477932662767E-199 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CARMIL1 | 55604 | 21581 | 1.16 | 0.59 | 0.09 | 1.6347790438468E-113 | 5.5082245103374E-109 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | MT1G | 4495 | 7399 | 1.15 | 0.11 | 0.005 | 1.3369035944142E-44 | 4.5045629710193E-40 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | UGT3A1 | 133688 | 26625 | 1.15 | 0.63 | 0.05 | 1.8993347598637E-186 | 6.3996185398847E-182 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CEBPD | 1052 | 1835 | 1.15 | 0.87 | 0.27 | 9.3021345044119E-96 | 3.1342611999165E-91 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | MSRB1 | 51734 | 14133 | 1.14 | 0.84 | 0.21 | 2.194889636924E-115 | 7.3954611426519E-111 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP1B1 | 481 | 804 | 1.13 | 0.77 | 0.25 | 5.4395121918191E-81 | 1.8327892379115E-76 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GK | 2710 | 4289 | 1.12 | 0.71 | 0.11 | 1.7969813663351E-141 | 6.0547490157294E-137 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | LGALS2 | 3957 | 6562 | 1.11 | 0.66 | 0.04 | 1.2572350740051E-205 | 4.2361278583527E-201 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM176A | 55365 | 24930 | 1.11 | 0.6 | 0.05 | 8.8060279132231E-167 | 2.9671030450814E-162 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CA2 | 760 | 1373 | 1.1 | 0.65 | 0.13 | 2.1142147641279E-91 | 7.1236352262525E-87 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | PSMA2 | 5683 | 9531 | 1.09 | 0.93 | 0.74 | 4.0591305260497E-39 | 1.3676834394472E-34 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DBI | 1622 | 2690 | 1.08 | 0.91 | 0.44 | 1.8410620253813E-84 | 6.2032743883198E-80 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GLYAT | 10249 | 13734 | 1.08 | 0.63 | 0.009 | 0 | 0 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | C11orf54 | 28970 | 30204 | 1.07 | 0.75 | 0.23 | 2.480517237642E-81 | 8.3578547805109E-77 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DAB2 | 1601 | 2662 | 1.06 | 0.92 | 0.3 | 1.1462972509755E-100 | 3.8623339574368E-96 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | S100A10 | 6281 | 10487 | 1.05 | 0.88 | 0.27 | 3.9796527934364E-94 | 1.3409042122205E-89 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC5A8 | 160728 | 19119 | 1.04 | 0.54 | 0.02 | 5.6824354122621E-230 | 1.9146397878076E-225 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GLS | 2744 | 4331 | 1.04 | 0.77 | 0.21 | 2.2674160786818E-91 | 7.6398317355106E-87 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GCHFR | 2644 | 4194 | 1.04 | 0.68 | 0.13 | 2.5400265651897E-107 | 8.5583655087502E-103 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ANXA4 | 307 | 542 | 1.03 | 0.75 | 0.25 | 7.0382582857272E-75 | 2.3714707467929E-70 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CHCHD10 | 400916 | 15559 | 1.02 | 0.8 | 0.23 | 5.1692040590221E-90 | 1.7417116156469E-85 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ELF3 | 1999 | 3318 | 1.02 | 0.69 | 0.11 | 2.8865843671408E-119 | 9.7260573666442E-115 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CYB5A | 1528 | 2570 | 1.02 | 0.87 | 0.38 | 3.8127404575446E-74 | 1.2846647697651E-69 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | TGIF1 | 7050 | 11776 | 1.01 | 0.9 | 0.32 | 2.6513565005935E-89 | 8.9334805930996E-85 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP5IF1 | 93974 | 871 | 0.99 | 0.98 | 0.77 | 4.2110797578717E-82 | 1.4188812136173E-77 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DNPH1 | 10591 | 21218 | 0.98 | 0.85 | 0.39 | 2.7521356350114E-74 | 9.2730458086075E-70 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | LRP2 | 4036 | 6694 | 0.98 | 0.59 | 0.06 | 4.4706078784235E-147 | 1.506326618556E-142 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ALDH1A1 | 216 | 402 | 0.97 | 0.65 | 0.15 | 1.2236935397809E-87 | 4.1231130129377E-83 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | GNG11 | 2791 | 4403 | 0.97 | 0.8 | 0.18 | 4.4995165690294E-108 | 1.5160671127688E-103 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | KCNJ15 | 3772 | 6261 | 0.97 | 0.52 | 0.03 | 3.428658462027E-168 | 1.1552521821954E-163 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC13A1 | 6561 | 10916 | 0.97 | 0.5 | 0.01 | 1.0414173861091E-223 | 3.508951740756E-219 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | VMP1 | 81671 | 29559 | 0.96 | 0.75 | 0.34 | 1.1210780928352E-49 | 3.777360525999E-45 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP6V1F | 9296 | 16832 | 0.96 | 0.92 | 0.49 | 3.2705805989743E-73 | 1.1019894270184E-68 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC39A4 | 55630 | 17129 | 0.96 | 0.62 | 0.13 | 4.8343583034821E-91 | 1.6288886867753E-86 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ADAMTS9-AS1 | 101929335 | 40625 | 0.95 | 0.57 | 0.04 | 1.2558242209978E-179 | 4.23137413023E-175 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CRYL1 | 51084 | 18246 | 0.95 | 0.67 | 0.12 | 6.9308863359571E-111 | 2.3352928420374E-106 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ND3 | 4537 | 7458 | 0.95 | 0.97 | 0.76 | 2.4212373724724E-74 | 8.1581172028086E-70 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | PCSK1N | 27344 | 17301 | 0.93 | 0.61 | 0.15 | 5.8144624036567E-71 | 1.9591249622881E-66 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | VCAN | 1462 | 2464 | 0.93 | 0.86 | 0.31 | 1.466058476148E-73 | 4.939737429533E-69 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | UGCG | 7357 | 12524 | 0.93 | 0.73 | 0.22 | 5.8266258727544E-73 | 1.9632233215659E-68 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ND1 | 4535 | 7455 | 0.93 | 0.99 | 0.91 | 2.5495067745566E-82 | 8.590308126191E-78 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ALDH6A1 | 4329 | 7179 | 0.92 | 0.78 | 0.24 | 4.8062867053221E-79 | 1.6194302424912E-74 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CREB5 | 9586 | 16844 | 0.91 | 0.57 | 0.06 | 1.1103111684226E-142 | 3.7410824508832E-138 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | KRT8 | 3856 | 6446 | 0.91 | 0.74 | 0.18 | 3.4557407846933E-88 | 1.1643772999946E-83 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | HPN | 3249 | 5155 | 0.91 | 0.53 | 0.03 | 1.6661027665344E-189 | 5.6137666615609E-185 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | HSPE1 | 3336 | 5269 | 0.91 | 0.97 | 0.74 | 5.5485016554101E-63 | 1.8695121477739E-58 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | AFP | 174 | 317 | 0.91 | 0.37 | 0.007 | 9.5967240797307E-191 | 3.2335202114245E-186 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM176B | 28959 | 29596 | 0.9 | 0.65 | 0.08 | 2.3119213396562E-131 | 7.7897877618377E-127 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CYBA | 1535 | 2577 | 0.9 | 0.84 | 0.39 | 2.5519198248589E-61 | 8.5984386578796E-57 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | AIG1 | 51390 | 21607 | 0.89 | 0.78 | 0.28 | 3.4347298582893E-67 | 1.157297878452E-62 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | COX3 | 4514 | 7422 | 0.89 | 0.99 | 0.99 | 5.2748777119186E-100 | 1.7773172962538E-95 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC16A4 | 9122 | 10925 | 0.89 | 0.49 | 0.04 | 2.3828481824954E-143 | 8.0287686661E-139 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | AKR1A1 | 10327 | 380 | 0.88 | 0.87 | 0.46 | 3.1181142628978E-61 | 1.0506174197408E-56 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | FLRT3 | 23767 | 3762 | 0.88 | 0.72 | 0.23 | 5.6649771628041E-64 | 1.9087574052352E-59 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | TUBB4B | 10383 | 20771 | 0.87 | 0.94 | 0.67 | 9.0810967514498E-58 | 3.0597847394335E-53 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DDC | 1644 | 2719 | 0.86 | 0.47 | 0.04 | 8.3122076678382E-121 | 2.8007152516014E-116 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | IGFBP7 | 3490 | 5476 | 0.85 | 0.98 | 0.61 | 2.512065543961E-49 | 8.4641536438222E-45 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ATP6 | 4508 | 7414 | 0.84 | 0.99 | 0.97 | 6.2319743691458E-77 | 2.09980144394E-72 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | KRT18 | 3875 | 6430 | 0.84 | 0.83 | 0.31 | 1.185391286103E-65 | 3.9940573993954E-61 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | UGT2A3 | 79799 | 28528 | 0.84 | 0.37 | 0.01 | 6.6022179647831E-141 | 2.224551321054E-136 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ND4 | 4538 | 7459 | 0.84 | 0.99 | 0.99 | 5.7645483781722E-92 | 1.9423069305413E-87 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | DPYS | 1807 | 3013 | 0.84 | 0.44 | 0.01 | 2.3134280909622E-209 | 7.7948646096879E-205 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | NAT8 | 9027 | 18069 | 0.84 | 0.34 | 0.006 | 1.3147954145038E-175 | 4.430071669629E-171 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | TMEM256 | 254863 | 28618 | 0.84 | 0.77 | 0.29 | 1.0787203064394E-63 | 3.6346402005169E-59 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | FABP1 | 2168 | 3555 | 0.83 | 0.38 | 0.004 | 1.9395542005752E-214 | 6.535133923418E-210 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CDH6 | 1004 | 1765 | 0.83 | 0.7 | 0.2 | 4.1279867977812E-69 | 1.3908838716444E-64 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC39A5 | 283375 | 20502 | 0.83 | 0.48 | 0.02 | 6.4491163708198E-193 | 2.172965269984E-188 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | PHGDH | 26227 | 8923 | 0.82 | 0.77 | 0.31 | 2.0670648521329E-49 | 6.9647683127766E-45 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | ASRGL1 | 80150 | 16448 | 0.82 | 0.58 | 0.13 | 8.4390722432764E-77 | 2.8434610016496E-72 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC44A4 | 80736 | 13941 | 0.82 | 0.47 | 0.04 | 1.2264632966515E-120 | 4.1324454317376E-116 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | BNIP3 | 664 | 1084 | 0.82 | 0.75 | 0.31 | 1.4074945328444E-50 | 4.7424120789659E-46 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | PTGR1 | 22949 | 18429 | 0.81 | 0.79 | 0.44 | 1.5794887468322E-42 | 5.3219293835765E-38 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CLU | 1191 | 2095 | 0.81 | 0.69 | 0.23 | 8.1936571203798E-57 | 2.7607708301408E-52 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | SLC27A2 | 11001 | 10996 | 0.8 | 0.47 | 0.06 | 2.5394081563468E-96 | 8.5562818419948E-92 |
| 75 | 3 | ErPrT | Early proximal tubule | wk18 | CLEC18B | 497190 | 33849 | 0.8 | 0.62 | 0.16 | 3.3877030054441E-69 | 1.1414526506543E-64 |