Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SPINK1 | 6690 | 11244 | 2.61 | 0.18 | 0.001 | 4.85131359504536e-49 | 1.63460160271458e-44 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ADIRF | 10974 | 24043 | 2.15 | 0.54 | 0.01 | 3.07054100584115e-42 | 1.03458808650812e-37 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | WFDC2 | 10406 | 15939 | 2.13 | 0.63 | 0.12 | 6.6963319546962e-09 | 0.000225626208881534 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | STC1 | 6781 | 11373 | 2.02 | 0.36 | 0.01 | 2.57102902814251e-16 | 8.66282520742338e-12 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ADH1C | 126 | 251 | 1.99 | 0.45 | 0.006 | 7.68072279323131e-66 | 2.58794273795136e-61 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | KRT19 | 3880 | 6436 | 1.85 | 0.81 | 0.29 | 3.18786790309254e-07 | 0.01 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | FXYD3 | 5349 | 4027 | 1.83 | 0.45 | 0.003 | 1.04216199450017e-107 | 3.51146062426888e-103 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CLDN4 | 1364 | 2046 | 1.78 | 0.81 | 0.07 | 4.38772844598893e-21 | 1.47840122259151e-16 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ELF3 | 1999 | 3318 | 1.57 | 0.81 | 0.15 | 1.69037457737357e-11 | 5.6955481010025e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CALB1 | 793 | 1434 | 1.53 | 0.36 | 0.001 | 1.85353954161897e-120 | 6.24531613153096e-116 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | HMGCS2 | 3158 | 5008 | 1.52 | 0.45 | 0.008 | 1.88740146720649e-52 | 6.35941050360555e-48 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ND3 | 4537 | 7458 | 1.48 | 1 | 0.78 | 9.33488527539706e-08 | 0.00314529624469229 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PHLDA2 | 7262 | 12385 | 1.4 | 0.36 | 0.01 | 4.24313153449062e-24 | 1.42968073923127e-19 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | GSTM3 | 2947 | 4635 | 1.38 | 0.72 | 0.2 | 5.61705517919351e-07 | 0.01 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | JUND | 3727 | 6206 | 1.36 | 0.63 | 0.14 | 7.77529763337374e-07 | 0.02 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CLDN8 | 9073 | 2050 | 1.35 | 0.36 | 0.001 | 1.85353954161897e-120 | 6.24531613153096e-116 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PPP1R3C | 5507 | 9293 | 1.33 | 0.45 | 0.03 | 1.53173204283926e-13 | 5.16101794514262e-09 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SCIN | 85477 | 21695 | 1.3 | 0.45 | 0.04 | 1.6439759847275e-11 | 5.53921268294083e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | BLVRB | 645 | 1063 | 1.29 | 0.81 | 0.14 | 2.09832844740878e-12 | 7.07010787069914e-08 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TACSTD2 | 4070 | 11530 | 1.29 | 0.45 | 0.03 | 9.37497812195619e-16 | 3.15880512841192e-11 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CDH1 | 999 | 1748 | 1.28 | 0.54 | 0.01 | 4.89018098175748e-37 | 1.64769757999336e-32 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | GATA3 | 2625 | 4172 | 1.25 | 0.45 | 0.02 | 1.79559828643104e-16 | 6.05008886630075e-12 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | COX1 | 4512 | 7419 | 1.24 | 1 | 0.99 | 4.56675220492698e-08 | 0.0015387214879281 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | NPY1R | 4886 | 7956 | 1.22 | 0.36 | 0.01 | 1.83913625455355e-25 | 6.19678569609273e-21 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ATP6 | 4508 | 7414 | 1.22 | 1 | 0.97 | 5.67000931393883e-08 | 0.00191045293823855 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | KLF5 | 688 | 6349 | 1.19 | 0.45 | 0.07 | 2.44441483104048e-07 | 0.0082362113317078 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ND4 | 4538 | 7459 | 1.17 | 1 | 0.99 | 8.22017969472369e-08 | 0.0027697073463402 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | HOXB6 | 3216 | 5117 | 1.15 | 0.63 | 0.12 | 1.54448119790327e-08 | 0.000520397494821527 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MECOM | 2122 | 3498 | 1.13 | 0.45 | 0.04 | 1.14646100342264e-10 | 3.86288570493226e-06 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CTSH | 1512 | 2535 | 1.11 | 0.45 | 0.06 | 5.76961543459633e-08 | 0.00194401422453289 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | COX3 | 4514 | 7422 | 1.1 | 1 | 0.99 | 1.21603472099003e-07 | 0.00409730738890382 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | GPRC5B | 51704 | 13308 | 1.09 | 0.45 | 0.05 | 7.68526726704553e-10 | 2.58947395295832e-05 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | BLNK | 29760 | 14211 | 1.08 | 0.36 | 0.01 | 4.12180278471835e-23 | 1.388800230283e-18 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | GATA2 | 2624 | 4171 | 1.08 | 0.36 | 0.03 | 2.89252847246648e-10 | 9.74608543512857e-06 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CYTB | 4519 | 7427 | 1.07 | 1 | 0.99 | 3.6684401553987e-07 | 0.01 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | AGR2 | 10551 | 328 | 1.04 | 0.36 | 0.004 | 3.91088775759845e-57 | 1.31773452104522e-52 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TMEM159 | 57146 | 30136 | 1.04 | 0.45 | 0.03 | 3.06839327205977e-13 | 1.03386442908782e-08 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TMTC2 | 160335 | 25440 | 1.02 | 0.54 | 0.03 | 4.83884482044001e-19 | 1.63040037379906e-14 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | COX2 | 4513 | 7421 | 1.02 | 1 | 0.98 | 2.68592947203494e-07 | 0.00904997076307454 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | AOC1 | 26 | 80 | 1.01 | 0.27 | 0.005 | 6.85310725183471e-31 | 2.30908595743319e-26 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ATP12A | 479 | 13816 | 1 | 0.27 | 0.001 | 7.67002268997556e-78 | 2.58433744516036e-73 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | VMP1 | 81671 | 29559 | 1 | 1 | 0.37 | 3.00768665221659e-07 | 0.01 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TES | 26136 | 14620 | 0.99 | 0.63 | 0.14 | 5.14215669199595e-07 | 0.01 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MAL | 4118 | 6817 | 0.98 | 0.63 | 0.08 | 1.27590341010754e-11 | 4.29902895001636e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MTURN | 222166 | 25457 | 0.97 | 0.36 | 0.04 | 1.63169565525834e-07 | 0.00549783534082744 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PVALB | 5816 | 9704 | 0.97 | 0.18 | 0.001 | 5.22441503361381e-61 | 1.76031440142584e-56 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | UTP14C | 9724 | 20321 | 0.96 | 0.63 | 0.08 | 1.59422212942758e-11 | 5.37157204289328e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MYO6 | 4646 | 7605 | 0.93 | 0.81 | 0.2 | 5.02410006540703e-08 | 0.00169282027603825 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | USP38 | 84640 | 20067 | 0.93 | 0.45 | 0.07 | 1.15216098150461e-06 | 0.03 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ZRANB1 | 54764 | 18224 | 0.91 | 0.63 | 0.12 | 1.5092138207094e-07 | 0.00508514504749824 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ND2 | 4536 | 7456 | 0.91 | 1 | 0.98 | 8.32988212016835e-07 | 0.02 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SAMSN1 | 64092 | 10528 | 0.9 | 0.27 | 0.007 | 2.1726066220277e-22 | 7.32038075226012e-18 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TSPAN1 | 10103 | 20657 | 0.9 | 0.27 | 0.01 | 1.15704800366078e-14 | 3.89855754353463e-10 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PYCARD | 29108 | 16608 | 0.9 | 0.36 | 0.04 | 8.10226759570448e-07 | 0.02 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SCNN1G | 6340 | 10602 | 0.9 | 0.27 | 0.003 | 6.97605124094121e-46 | 2.35051070512273e-41 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TNNI3 | 7137 | 11947 | 0.9 | 0.18 | 0.01 | 9.36480013787424e-08 | 0.00315537575845535 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | LNX1 | 84708 | 6657 | 0.89 | 0.27 | 0.01 | 1.17325690746954e-14 | 3.95317182402786e-10 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MED1 | 5469 | 9234 | 0.88 | 0.54 | 0.1 | 2.35829646540486e-07 | 0.00794604411053514 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | HIPK1-AS1 | 101928846 | 50576 | 0.87 | 0.36 | 0.007 | 9.9387088706883e-38 | 3.34874856688972e-33 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CCNO | 10309 | 18576 | 0.86 | 0.18 | 0.002 | 4.64275852027682e-31 | 1.56433105582207e-26 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | AQP2 | 359 | 634 | 0.86 | 0.18 | 0.002 | 4.64275852027682e-31 | 1.56433105582207e-26 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | IGSF3 | 3321 | 5950 | 0.86 | 0.45 | 0.01 | 2.95545226248068e-27 | 9.9581008532024e-23 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CEMIP2 | 23670 | 11869 | 0.85 | 0.36 | 0.03 | 2.20141399458268e-10 | 7.41744431334689e-06 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PPL | 5493 | 9273 | 0.85 | 0.36 | 0.02 | 5.82669074176288e-13 | 1.96324517852958e-08 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | FXYD5 | 53827 | 4029 | 0.85 | 0.36 | 0.02 | 6.26014623668501e-15 | 2.10929367298865e-10 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | L1CAM | 3897 | 6470 | 0.85 | 0.36 | 0.001 | 2.22376245130858e-120 | 7.49274520343912e-116 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PPP1R3B | 79660 | 14942 | 0.84 | 0.36 | 0.01 | 3.17154957146963e-20 | 1.06862191261098e-15 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MAGI3 | 260425 | 29647 | 0.84 | 0.36 | 0.04 | 4.66057161174164e-08 | 0.00157033299886023 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ARHGAP8 | 23779 | 677 | 0.82 | 0.36 | 0.04 | 7.84427308990055e-08 | 0.00264304937491109 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | STPG1 | 90529 | 28070 | 0.82 | 0.45 | 0.03 | 5.16901929064395e-15 | 1.74164935978957e-10 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SNCG | 6623 | 11141 | 0.82 | 0.18 | 0.004 | 3.61756928841537e-18 | 1.21890379603867e-13 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ELL2 | 22936 | 17064 | 0.81 | 0.36 | 0.04 | 6.17037107809962e-08 | 0.00207904483105489 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ZNF44 | 51710 | 13110 | 0.79 | 0.45 | 0.07 | 7.88801329829731e-07 | 0.02 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PDE7B | 27115 | 8792 | 0.79 | 0.36 | 0.004 | 8.08704069796971e-57 | 2.72484749277391e-52 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MBD2 | 8932 | 6917 | 0.79 | 0.45 | 0.05 | 8.60806954076908e-09 | 0.000290040295106673 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ENSG00000255046 | NULL | 0.76 | 0.27 | 0.03 | 1.46986155814837e-06 | 0.04 | |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | LY6D | 8581 | 13348 | 0.76 | 0.18 | 0 | 9.33898092293053e-121 | 3.14667623217221e-116 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | GALNT12 | 79695 | 19877 | 0.76 | 0.27 | 0.003 | 1.98333807461863e-42 | 6.68265930862001e-38 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | WNT7B | 7477 | 12787 | 0.75 | 0.36 | 0.01 | 5.27127472648848e-28 | 1.77610330634303e-23 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CNN1 | 1264 | 2155 | 0.75 | 0.18 | 0.003 | 7.53045125687849e-23 | 2.53731024649264e-18 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CAPS | 828 | 1487 | 0.75 | 0.36 | 0.02 | 1.45363940186684e-11 | 4.89789260065014e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | MYH14 | 79784 | 23212 | 0.74 | 0.27 | 0.01 | 8.9907774708506e-12 | 3.0293525610284e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ENSG00000277969 | NULL | 0.74 | 0.36 | 0.02 | 1.24436909237511e-12 | 4.19277721984871e-08 | |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | RAP1GAP2 | 23108 | 29176 | 0.73 | 0.27 | 0.01 | 7.617316207015e-12 | 2.56657852279163e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | DOCK8 | 81704 | 19191 | 0.73 | 0.27 | 0.01 | 2.90041267545812e-10 | 9.7726504686886e-06 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TGFA | 7039 | 11765 | 0.73 | 0.27 | 0.02 | 2.95010653231001e-08 | 0.000994008894996534 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | IRX2 | 153572 | 14359 | 0.73 | 0.27 | 0.01 | 1.68352903630774e-12 | 5.67248273493528e-08 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | IRF9 | 10379 | 6131 | 0.72 | 0.27 | 0.02 | 1.97184113871425e-09 | 6.64392153278379e-05 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | EPHA1-AS1 | 285965 | 27799 | 0.72 | 0.36 | 0.007 | 2.29660927389346e-37 | 7.73819528745662e-33 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | LOC105371267 | 105371267 | NULL | 0.7 | 0.27 | 0.01 | 1.51435672166014e-11 | 5.10247353796167e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TMC4 | 147798 | 22998 | 0.7 | 0.36 | 0.01 | 2.00560618086146e-21 | 6.75768946579459e-17 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | ZNF514 | 84874 | 25894 | 0.7 | 0.36 | 0.03 | 1.59498270471108e-08 | 0.000537413472525353 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SEMA3F | 6405 | 10728 | 0.7 | 0.36 | 0.01 | 1.15362580886352e-16 | 3.88702680038476e-12 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | NIPAL1 | 152519 | 27194 | 0.69 | 0.36 | 0.02 | 3.91767576344605e-12 | 1.32002167173551e-07 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | DEGS2 | 123099 | 20113 | 0.68 | 0.27 | 0.008 | 3.80575335019686e-20 | 1.28231053381533e-15 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | CYTOR | 112597 | 28717 | 0.68 | 0.27 | 0.02 | 1.28667863635802e-07 | 0.0043353349973447 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SLC43A2 | 124935 | 23087 | 0.67 | 0.36 | 0.04 | 6.84384739285997e-07 | 0.02 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | PAPSS2 | 9060 | 8604 | 0.66 | 0.27 | 0.01 | 2.1793046189382e-12 | 7.34294898305038e-08 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | SREBF2-AS1 | 112637020 | 53953 | 0.65 | 0.36 | 0.04 | 1.39655745417359e-07 | 0.00470556068609249 |
75 | 21 | UBCD | Ureteric bud/collecting duct | wk18 | TMEM45B | 120224 | 25194 | 0.64 | 0.18 | 0.004 | 5.11048195382269e-17 | 1.72192578952102e-12 |