Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 2 | End | Endothelial cells | wk18 | PLVAP | 83483 | 13635 | 2.98 | 0.89 | 0.06 | 1.23978695374047e-119 | 4.17733816193314e-115 |
75 | 2 | End | Endothelial cells | wk18 | IGFBP5 | 3488 | 5474 | 2.57 | 0.72 | 0.08 | 1.16010431106441e-61 | 3.90885546570041e-57 |
75 | 2 | End | Endothelial cells | wk18 | CD74 | 972 | 1697 | 2.51 | 0.91 | 0.14 | 2.6169397712496e-64 | 8.81751686524841e-60 |
75 | 2 | End | Endothelial cells | wk18 | RAMP2 | 10266 | 9844 | 2.47 | 0.89 | 0.06 | 2.9454551158466e-119 | 9.92441646733353e-115 |
75 | 2 | End | Endothelial cells | wk18 | EGFL7 | 51162 | 20594 | 2.12 | 0.87 | 0.08 | 1.68361860579754e-90 | 5.67278453037423e-86 |
75 | 2 | End | Endothelial cells | wk18 | TM4SF1 | 4071 | 11853 | 2.1 | 0.68 | 0.03 | 3.81169495227648e-99 | 1.28431249722004e-94 |
75 | 2 | End | Endothelial cells | wk18 | RNASE1 | 6035 | 10044 | 2.09 | 0.72 | 0.003 | 0 | 0 |
75 | 2 | End | Endothelial cells | wk18 | GNG11 | 2791 | 4403 | 2.09 | 0.93 | 0.21 | 1.45510523058607e-46 | 4.90283156393671e-42 |
75 | 2 | End | Endothelial cells | wk18 | PRCP | 5547 | 9344 | 2.06 | 0.97 | 0.25 | 5.54622922311044e-47 | 1.86874647443483e-42 |
75 | 2 | End | Endothelial cells | wk18 | ITM2A | 9452 | 6173 | 2.01 | 0.81 | 0.05 | 1.26745380612381e-105 | 4.27055885435356e-101 |
75 | 2 | End | Endothelial cells | wk18 | HLA-DRA | 3122 | 4947 | 1.92 | 0.56 | 0.01 | 6.18381170790175e-155 | 2.08357351686042e-150 |
75 | 2 | End | Endothelial cells | wk18 | APLNR | 187 | 339 | 1.92 | 0.66 | 0.001 | 0 | 0 |
75 | 2 | End | Endothelial cells | wk18 | EMCN | 51705 | 16041 | 1.9 | 0.75 | 0.07 | 1.08262756758976e-66 | 3.64780532623694e-62 |
75 | 2 | End | Endothelial cells | wk18 | ECSCR | 641700 | 35454 | 1.89 | 0.79 | 0.002 | 0 | 0 |
75 | 2 | End | Endothelial cells | wk18 | ESAM | 90952 | 17474 | 1.82 | 0.81 | 0.08 | 1.97349103309808e-78 | 6.64948068692067e-74 |
75 | 2 | End | Endothelial cells | wk18 | B2M | 567 | 914 | 1.78 | 1 | 0.74 | 2.80705880466712e-29 | 9.45810393644539e-25 |
75 | 2 | End | Endothelial cells | wk18 | HLA-B | 3106 | 4932 | 1.74 | 0.95 | 0.2 | 5.24328272392829e-50 | 1.7666716810004e-45 |
75 | 2 | End | Endothelial cells | wk18 | HLA-E | 3133 | 4962 | 1.73 | 0.7 | 0.19 | 8.72338323820164e-26 | 2.93925674827966e-21 |
75 | 2 | End | Endothelial cells | wk18 | COTL1 | 23406 | 18304 | 1.71 | 0.77 | 0.34 | 1.04149632052779e-20 | 3.50921770238634e-16 |
75 | 2 | End | Endothelial cells | wk18 | PECAM1 | 5175 | 8823 | 1.69 | 0.77 | 0.003 | 0 | 0 |
75 | 2 | End | Endothelial cells | wk18 | HSPG2 | 3339 | 5273 | 1.66 | 0.58 | 0.08 | 2.10863187441449e-39 | 7.10482423765218e-35 |
75 | 2 | End | Endothelial cells | wk18 | FN1 | 2335 | 3778 | 1.65 | 0.64 | 0.09 | 8.31809629958392e-40 | 2.80269936718181e-35 |
75 | 2 | End | Endothelial cells | wk18 | GMFG | 9535 | 4374 | 1.63 | 0.6 | 0.008 | 6.8970986986821e-220 | 2.32390843553395e-215 |
75 | 2 | End | Endothelial cells | wk18 | ICAM2 | 3384 | 5345 | 1.62 | 0.6 | 0.004 | 1.8964318668912e-279 | 6.38983753230322e-275 |
75 | 2 | End | Endothelial cells | wk18 | PLPP3 | 8613 | 9229 | 1.57 | 0.87 | 0.25 | 6.48402845783175e-33 | 2.18472854858183e-28 |
75 | 2 | End | Endothelial cells | wk18 | HLA-DRB1 | 3123 | 4948 | 1.57 | 0.47 | 0.01 | 3.47939076938366e-116 | 1.17234592583613e-111 |
75 | 2 | End | Endothelial cells | wk18 | TCIM | 56892 | 1357 | 1.57 | 0.64 | 0.07 | 1.08347658159385e-51 | 3.65066599402232e-47 |
75 | 2 | End | Endothelial cells | wk18 | NTS | 4922 | 8038 | 1.57 | 0.29 | 0.003 | 1.46774460486755e-115 | 4.94541867164071e-111 |
75 | 2 | End | Endothelial cells | wk18 | CAVIN2 | 8436 | 10690 | 1.56 | 0.64 | 0.07 | 3.88023190804375e-52 | 1.30740533909626e-47 |
75 | 2 | End | Endothelial cells | wk18 | CD34 | 947 | 1662 | 1.55 | 0.62 | 0.007 | 3.48229867398646e-240 | 1.173325715213e-235 |
75 | 2 | End | Endothelial cells | wk18 | GYPC | 2995 | 4704 | 1.54 | 0.81 | 0.2 | 8.08775632588712e-34 | 2.72508861644441e-29 |
75 | 2 | End | Endothelial cells | wk18 | RBP5 | 83758 | 15847 | 1.52 | 0.58 | 0.009 | 6.59138754840352e-194 | 2.22090212055908e-189 |
75 | 2 | End | Endothelial cells | wk18 | FAM167B | 84734 | 28133 | 1.5 | 0.6 | 0.004 | 6.82439300417406e-273 | 2.29941097882641e-268 |
75 | 2 | End | Endothelial cells | wk18 | CCDC85B | 11007 | 24926 | 1.49 | 0.85 | 0.18 | 1.42611149951448e-40 | 4.80514008646408e-36 |
75 | 2 | End | Endothelial cells | wk18 | TMEM88 | 92162 | 32371 | 1.49 | 0.52 | 0.02 | 8.15373724043344e-84 | 2.74732022579164e-79 |
75 | 2 | End | Endothelial cells | wk18 | HSPB1 | 3315 | 5246 | 1.48 | 0.93 | 0.56 | 1.86846787713275e-19 | 6.2956156652111e-15 |
75 | 2 | End | Endothelial cells | wk18 | LGALS1 | 3956 | 6561 | 1.47 | 0.77 | 0.19 | 1.58376254632017e-24 | 5.33632952357118e-20 |
75 | 2 | End | Endothelial cells | wk18 | HLA-C | 3107 | 4933 | 1.43 | 0.81 | 0.14 | 2.09229202832979e-43 | 7.04976876025438e-39 |
75 | 2 | End | Endothelial cells | wk18 | S100A16 | 140576 | 20441 | 1.42 | 0.83 | 0.38 | 1.74732393534045e-19 | 5.8874332677361e-15 |
75 | 2 | End | Endothelial cells | wk18 | TM4SF18 | 116441 | 25181 | 1.42 | 0.47 | 0.001 | 1.38657402785237e-266 | 4.67192252944578e-262 |
75 | 2 | End | Endothelial cells | wk18 | TIE1 | 7075 | 11809 | 1.37 | 0.6 | 0.003 | 3.35734098168168e-301 | 1.13122247036783e-296 |
75 | 2 | End | Endothelial cells | wk18 | CDH5 | 1003 | 1764 | 1.37 | 0.6 | 0.001 | 0 | 0 |
75 | 2 | End | Endothelial cells | wk18 | KANK3 | 256949 | 24796 | 1.36 | 0.6 | 0.008 | 5.96979244639259e-211 | 2.01146186688752e-206 |
75 | 2 | End | Endothelial cells | wk18 | THY1 | 7070 | 11801 | 1.34 | 0.54 | 0.09 | 1.75583154812746e-28 | 5.91609881826067e-24 |
75 | 2 | End | Endothelial cells | wk18 | NPDC1 | 56654 | 7899 | 1.3 | 0.62 | 0.14 | 7.61667180109625e-25 | 2.56636139666137e-20 |
75 | 2 | End | Endothelial cells | wk18 | SH3BP5 | 9467 | 10827 | 1.3 | 0.68 | 0.15 | 1.41599230792396e-27 | 4.77104448231897e-23 |
75 | 2 | End | Endothelial cells | wk18 | TMSB10 | 9168 | 11879 | 1.29 | 1 | 0.94 | 2.88074324783376e-27 | 9.70637629925106e-23 |
75 | 2 | End | Endothelial cells | wk18 | CCL2 | 6347 | 10618 | 1.29 | 0.22 | 0.03 | 1.47342411962069e-11 | 4.96455522864997e-07 |
75 | 2 | End | Endothelial cells | wk18 | RHOC | 389 | 669 | 1.27 | 0.83 | 0.37 | 4.64876255655971e-21 | 1.56635405580723e-16 |
75 | 2 | End | Endothelial cells | wk18 | MEF2C | 4208 | 6996 | 1.27 | 0.5 | 0.04 | 1.73627085714427e-50 | 5.8501910260619e-46 |
75 | 2 | End | Endothelial cells | wk18 | S100A10 | 6281 | 10487 | 1.24 | 0.81 | 0.31 | 1.00652676737894e-19 | 3.3913912900066e-15 |
75 | 2 | End | Endothelial cells | wk18 | FXYD6 | 53826 | 4030 | 1.23 | 0.68 | 0.27 | 2.58842751568334e-16 | 8.72144767134343e-12 |
75 | 2 | End | Endothelial cells | wk18 | ELK3 | 2004 | 3325 | 1.23 | 0.66 | 0.04 | 2.10025198111823e-88 | 7.07658902517976e-84 |
75 | 2 | End | Endothelial cells | wk18 | NFIB | 4781 | 7785 | 1.23 | 0.5 | 0.02 | 1.68789777191857e-71 | 5.68720275270243e-67 |
75 | 2 | End | Endothelial cells | wk18 | NRP2 | 8828 | 8005 | 1.22 | 0.52 | 0.15 | 4.41866424985968e-16 | 1.48882473234772e-11 |
75 | 2 | End | Endothelial cells | wk18 | LYVE1 | 10894 | 14687 | 1.22 | 0.37 | 0.001 | 4.54504939061598e-200 | 1.53140894167415e-195 |
75 | 2 | End | Endothelial cells | wk18 | TFPI | 7035 | 11760 | 1.22 | 0.56 | 0.04 | 8.27281660378618e-62 | 2.78744282647971e-57 |
75 | 2 | End | Endothelial cells | wk18 | ENG | 2022 | 3349 | 1.21 | 0.47 | 0.05 | 3.28333744914275e-35 | 1.10628772011416e-30 |
75 | 2 | End | Endothelial cells | wk18 | TMEM204 | 79652 | 14158 | 1.2 | 0.56 | 0.03 | 2.79068634122601e-77 | 9.40293855812693e-73 |
75 | 2 | End | Endothelial cells | wk18 | MARCKS | 4082 | 6759 | 1.2 | 0.89 | 0.52 | 2.33677937833108e-18 | 7.87354443734873e-14 |
75 | 2 | End | Endothelial cells | wk18 | PLXND1 | 23129 | 9107 | 1.2 | 0.6 | 0.06 | 1.64630968084542e-50 | 5.54707583864055e-46 |
75 | 2 | End | Endothelial cells | wk18 | VAMP5 | 10791 | 12646 | 1.19 | 0.77 | 0.33 | 7.83487729509523e-17 | 2.63988355580939e-12 |
75 | 2 | End | Endothelial cells | wk18 | ROBO4 | 54538 | 17985 | 1.18 | 0.54 | 0.002 | 1.50629364568629e-287 | 5.07530580977538e-283 |
75 | 2 | End | Endothelial cells | wk18 | SMAGP | 57228 | 26918 | 1.18 | 0.45 | 0.05 | 1.5312626143772e-36 | 5.15943625288255e-32 |
75 | 2 | End | Endothelial cells | wk18 | FKBP1A | 2280 | 3711 | 1.16 | 1 | 0.75 | 6.17801112336545e-24 | 2.08161906790675e-19 |
75 | 2 | End | Endothelial cells | wk18 | TGFBR2 | 7048 | 11773 | 1.16 | 0.58 | 0.09 | 5.27227260488685e-32 | 1.77643953149058e-27 |
75 | 2 | End | Endothelial cells | wk18 | SPTBN1 | 6711 | 11275 | 1.15 | 0.6 | 0.24 | 1.57814356172937e-13 | 5.31739691689095e-09 |
75 | 2 | End | Endothelial cells | wk18 | GIMAP7 | 168537 | 22404 | 1.14 | 0.35 | 0.001 | 1.55202873824144e-196 | 5.22940563063071e-192 |
75 | 2 | End | Endothelial cells | wk18 | CD93 | 22918 | 15855 | 1.14 | 0.41 | 0.001 | 9.81030144921613e-237 | 3.30548297029888e-232 |
75 | 2 | End | Endothelial cells | wk18 | GIMAP4 | 55303 | 21872 | 1.11 | 0.39 | 0.002 | 1.5650321084741e-204 | 5.27321918629264e-200 |
75 | 2 | End | Endothelial cells | wk18 | CAVIN1 | 284119 | 9688 | 1.11 | 0.37 | 0.07 | 1.5065207756052e-15 | 5.07607110132417e-11 |
75 | 2 | End | Endothelial cells | wk18 | LDB2 | 9079 | 6533 | 1.1 | 0.52 | 0.06 | 1.63987322946908e-38 | 5.52538885937312e-34 |
75 | 2 | End | Endothelial cells | wk18 | AP2S1 | 1175 | 565 | 1.09 | 0.68 | 0.41 | 1.76588151249093e-11 | 5.94996116818696e-07 |
75 | 2 | End | Endothelial cells | wk18 | CRIP2 | 1397 | 2361 | 1.09 | 0.83 | 0.42 | 3.56209460520275e-15 | 1.20021215627701e-10 |
75 | 2 | End | Endothelial cells | wk18 | SERPINH1 | 871 | 1546 | 1.09 | 0.91 | 0.55 | 1.67457411424011e-17 | 5.64231002052063e-13 |
75 | 2 | End | Endothelial cells | wk18 | SDCBP | 6386 | 10662 | 1.08 | 0.77 | 0.44 | 2.32733367118866e-14 | 7.84171807170308e-10 |
75 | 2 | End | Endothelial cells | wk18 | TMEM255B | 348013 | 28297 | 1.08 | 0.43 | 0.004 | 5.44031129275349e-187 | 1.83305848698036e-182 |
75 | 2 | End | Endothelial cells | wk18 | FCGRT | 2217 | 3621 | 1.08 | 0.77 | 0.39 | 4.07260982733434e-13 | 1.37222515522203e-08 |
75 | 2 | End | Endothelial cells | wk18 | CALM1 | 801 | 1442 | 1.07 | 0.85 | 0.56 | 5.30525943440392e-15 | 1.78755411382806e-10 |
75 | 2 | End | Endothelial cells | wk18 | LRRC32 | 2615 | 4161 | 1.07 | 0.41 | 0.01 | 4.84399608146409e-76 | 1.63213603968851e-71 |
75 | 2 | End | Endothelial cells | wk18 | RASGRP3 | 25780 | 14545 | 1.06 | 0.43 | 0.02 | 3.53248317622213e-61 | 1.19023488139628e-56 |
75 | 2 | End | Endothelial cells | wk18 | A2M | 2 | 7 | 1.05 | 0.5 | 0.03 | 3.10478154839557e-52 | 1.0461250949164e-47 |
75 | 2 | End | Endothelial cells | wk18 | MSN | 4478 | 7373 | 1.04 | 0.58 | 0.23 | 8.14440195722253e-13 | 2.74417479546656e-08 |
75 | 2 | End | Endothelial cells | wk18 | SOX17 | 64321 | 18122 | 1.04 | 0.41 | 0 | 2.02548813139703e-272 | 6.82467970992916e-268 |
75 | 2 | End | Endothelial cells | wk18 | IFITM3 | 10410 | 5414 | 1.04 | 0.91 | 0.71 | 1.99035292270773e-14 | 6.70629513777142e-10 |
75 | 2 | End | Endothelial cells | wk18 | LIMCH1 | 22998 | 29191 | 1.03 | 0.54 | 0.05 | 1.50374004565348e-42 | 5.06670170982484e-38 |
75 | 2 | End | Endothelial cells | wk18 | CETP | 1071 | 1869 | 1.02 | 0.39 | 0.001 | 4.21106710245201e-223 | 1.41887694950018e-218 |
75 | 2 | End | Endothelial cells | wk18 | AP1S2 | 8905 | 560 | 1.02 | 0.6 | 0.19 | 3.59465141090387e-17 | 1.21118184638995e-12 |
75 | 2 | End | Endothelial cells | wk18 | EMP1 | 2012 | 3333 | 1.02 | 0.56 | 0.07 | 2.16970827556013e-37 | 7.31061506367229e-33 |
75 | 2 | End | Endothelial cells | wk18 | IGFBP4 | 3487 | 5473 | 1 | 0.83 | 0.53 | 9.88826415221674e-12 | 3.33175172344791e-07 |
75 | 2 | End | Endothelial cells | wk18 | MYL12A | 10627 | 16701 | 0.99 | 0.97 | 0.74 | 2.41991245263608e-18 | 8.15365301791203e-14 |
75 | 2 | End | Endothelial cells | wk18 | PLAT | 5327 | 9051 | 0.99 | 0.41 | 0.16 | 1.77293818722575e-07 | 0.00597373792803843 |
75 | 2 | End | Endothelial cells | wk18 | ADGRL4 | 64123 | 20822 | 0.99 | 0.35 | 0.001 | 2.95227152810624e-187 | 9.94738368680115e-183 |
75 | 2 | End | Endothelial cells | wk18 | COL4A1 | 1282 | 2202 | 0.99 | 0.62 | 0.27 | 2.42443561882279e-12 | 8.16889337406151e-08 |
75 | 2 | End | Endothelial cells | wk18 | LPAR6 | 10161 | 15520 | 0.98 | 0.5 | 0.1 | 2.58456975663972e-20 | 8.70844933802187e-16 |
75 | 2 | End | Endothelial cells | wk18 | DNASE1L3 | 1776 | 2959 | 0.98 | 0.16 | 0 | 9.32830844499895e-110 | 3.14308024745795e-105 |
75 | 2 | End | Endothelial cells | wk18 | MMRN2 | 79812 | 19888 | 0.98 | 0.33 | 0.003 | 1.11219549076259e-144 | 3.74743148657548e-140 |
75 | 2 | End | Endothelial cells | wk18 | HYAL2 | 8692 | 5321 | 0.98 | 0.54 | 0.3 | 3.40944145842452e-07 | 0.01 |
75 | 2 | End | Endothelial cells | wk18 | NOSTRIN | 115677 | 20203 | 0.97 | 0.41 | 0.006 | 2.99121866978626e-142 | 1.00786121859778e-137 |
75 | 2 | End | Endothelial cells | wk18 | TEK | 7010 | 11724 | 0.97 | 0.47 | 0.001 | 5.01184924471465e-277 | 1.68869248451416e-272 |