Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CD24 | 100133941 | 1645 | 1.72 | 1 | 0.43 | 1.77890077414529e-45 | 5.99382826840513e-41 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MAL | 4118 | 6817 | 1.27 | 0.58 | 0.07 | 1.15532790377726e-50 | 3.89276183898709e-46 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LIMCH1 | 22998 | 29191 | 1.25 | 0.68 | 0.05 | 6.90964660690592e-98 | 2.32813632773088e-93 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ELF3 | 1999 | 3318 | 1.19 | 0.68 | 0.14 | 1.79708545881928e-36 | 6.05509974494569e-32 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | WFDC2 | 10406 | 15939 | 1.19 | 0.62 | 0.11 | 2.72113389958152e-40 | 9.16858856124998e-36 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CEBPD | 1052 | 1835 | 1.17 | 0.88 | 0.31 | 3.06014461836874e-31 | 1.03108512771316e-26 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CLDN4 | 1364 | 2046 | 1.07 | 0.55 | 0.06 | 1.35149895246634e-49 | 4.55374057044008e-45 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CPM | 1368 | 2311 | 1.05 | 0.49 | 0.06 | 3.13823896441426e-45 | 1.05739823666974e-40 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TUBB2B | 347733 | 30829 | 0.99 | 0.79 | 0.22 | 2.98377369249306e-30 | 1.00535270794861e-25 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | KLF6 | 1316 | 2235 | 0.99 | 0.86 | 0.44 | 2.97606238763675e-18 | 1.00275446089033e-13 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TCIM | 56892 | 1357 | 0.98 | 0.68 | 0.06 | 1.61453394212391e-75 | 5.44001066459229e-71 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | EFNA1 | 1942 | 3221 | 0.98 | 0.77 | 0.2 | 1.19642543178807e-31 | 4.03123584986673e-27 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SPP1 | 6696 | 11255 | 0.96 | 0.56 | 0.08 | 1.49936760715132e-37 | 5.05196921553564e-33 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TSPAN15 | 23555 | 23298 | 0.95 | 0.58 | 0.04 | 5.47584954737667e-81 | 1.8450327464931e-76 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ODC1 | 4953 | 8109 | 0.95 | 0.89 | 0.64 | 7.7041707824969e-08 | 0.00259584330345451 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CARMIL1 | 55604 | 21581 | 0.93 | 0.59 | 0.11 | 2.85490652905922e-32 | 9.61932205901214e-28 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | EGR1 | 1958 | 3238 | 0.92 | 0.88 | 0.39 | 1.68475994066605e-18 | 5.6766301440802e-14 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TRIB1 | 10221 | 16891 | 0.9 | 0.7 | 0.27 | 4.01064230097933e-18 | 1.35134581689197e-13 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | FXYD2 | 486 | 4026 | 0.88 | 0.76 | 0.17 | 2.73834665486813e-31 | 9.22658521891268e-27 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | EPCAM | 4072 | 11529 | 0.87 | 0.89 | 0.37 | 8.19800963424058e-24 | 2.76223736616102e-19 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MITF | 4286 | 7105 | 0.85 | 0.61 | 0.11 | 2.47535740597865e-37 | 8.34046924370447e-33 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MECOM | 2122 | 3498 | 0.83 | 0.41 | 0.03 | 1.31299047057752e-47 | 4.42399009156389e-43 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TSPAN8 | 7103 | 11855 | 0.83 | 0.55 | 0.14 | 3.84881279496283e-19 | 1.29681898313478e-14 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CLDN3 | 1365 | 2045 | 0.82 | 0.8 | 0.26 | 1.219878704774e-25 | 4.11025930786551e-21 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CLDN10 | 9071 | 2033 | 0.82 | 0.41 | 0.06 | 3.61979117486534e-28 | 1.21965243845913e-23 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HES1 | 3280 | 5192 | 0.81 | 0.91 | 0.77 | 7.88865906216486e-08 | 0.00265800478440583 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PMAIP1 | 5366 | 9108 | 0.81 | 0.55 | 0.12 | 4.26536258641856e-25 | 1.43717126986787e-20 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TNFRSF12A | 51330 | 18152 | 0.79 | 0.52 | 0.2 | 2.79551134200626e-12 | 9.4191959157559e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MAFF | 23764 | 6780 | 0.79 | 0.65 | 0.3 | 1.93905667002423e-11 | 6.53345754397965e-07 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MIR4435-2HG | 541471 | 35163 | 0.79 | 0.19 | 0.03 | 6.7697949247347e-12 | 2.28101470194011e-07 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SAT1 | 6303 | 10540 | 0.79 | 0.73 | 0.4 | 1.53457303445822e-12 | 5.17059038230351e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LRATD2 | 157638 | 24166 | 0.78 | 0.56 | 0.09 | 1.12443268775574e-37 | 3.78866349812419e-33 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CCN1 | 3491 | 2654 | 0.77 | 0.86 | 0.62 | 1.4407831293566e-12 | 4.85457467605413e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MCL1 | 4170 | 6943 | 0.76 | 0.95 | 0.57 | 8.82158043419317e-16 | 2.97234331149705e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ZNF44 | 51710 | 13110 | 0.75 | 0.44 | 0.06 | 4.03091358516079e-32 | 1.35817602338408e-27 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | DNER | 92737 | 24456 | 0.74 | 0.46 | 0.03 | 7.06667906957783e-61 | 2.38104684570355e-56 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RBM47 | 54502 | 30358 | 0.74 | 0.67 | 0.2 | 4.08686555311425e-21 | 1.37702847946631e-16 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | KLF5 | 688 | 6349 | 0.72 | 0.46 | 0.06 | 1.23819427808139e-36 | 4.17197180056744e-32 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ESRRG | 2104 | 3474 | 0.72 | 0.43 | 0.03 | 4.38835222640666e-59 | 1.47861139916546e-54 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SOX9 | 6662 | 11204 | 0.72 | 0.49 | 0.05 | 6.3800476681599e-45 | 2.1496932613098e-40 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SOX11 | 6664 | 11191 | 0.71 | 0.67 | 0.27 | 2.34520611697821e-12 | 7.90193749054639e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HMGA1 | 3159 | 5010 | 0.71 | 0.8 | 0.35 | 1.39797974454705e-16 | 4.71035295127683e-12 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | JAG1 | 182 | 6188 | 0.71 | 0.61 | 0.28 | 1.00159538069321e-10 | 3.37477547570769e-06 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | DKK1 | 22943 | 2891 | 0.7 | 0.23 | 0.02 | 1.69323352947817e-22 | 5.70518105422375e-18 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | DCDC2 | 51473 | 18141 | 0.69 | 0.68 | 0.24 | 4.37819545727403e-17 | 1.47518917737391e-12 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SOCS3 | 9021 | 19391 | 0.69 | 0.5 | 0.22 | 5.06188505933387e-09 | 0.000170555155189195 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ANXA4 | 307 | 542 | 0.69 | 0.82 | 0.28 | 1.16373857569463e-21 | 3.92110075694549e-17 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LINC02381 | 400043 | 53304 | 0.69 | 0.44 | 0.06 | 7.78741194193474e-34 | 2.62389057971549e-29 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LURAP1L | 286343 | 31452 | 0.67 | 0.65 | 0.21 | 1.19621740512864e-17 | 4.03053492484045e-13 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PAPPA2 | 60676 | 14615 | 0.67 | 0.16 | 0.006 | 6.34116738340491e-41 | 2.13659293816445e-36 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PERP | 64065 | 17637 | 0.67 | 0.58 | 0.09 | 2.50691725848928e-37 | 8.44680701075378e-33 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | IRX1 | 79192 | 14358 | 0.67 | 0.43 | 0.01 | 9.25215301493079e-105 | 3.11742043685078e-100 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | IRX6 | 79190 | 14675 | 0.65 | 0.34 | 0.007 | 5.37688776885519e-114 | 1.81168856483807e-109 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RAB3IP | 117177 | 16508 | 0.65 | 0.59 | 0.19 | 3.38603906877049e-16 | 1.14089200383153e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | VAV3 | 10451 | 12659 | 0.65 | 0.37 | 0.06 | 1.97579970955076e-24 | 6.65725954136035e-20 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ATF3 | 467 | 785 | 0.64 | 0.61 | 0.26 | 5.02667412081369e-11 | 1.69368757826696e-06 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | EFHD1 | 80303 | 29556 | 0.63 | 0.49 | 0.09 | 1.18368029014841e-25 | 3.98829236962605e-21 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ZFAS1 | 441951 | 33101 | 0.63 | 0.97 | 0.73 | 3.23416746649705e-16 | 1.08972038616151e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | C12orf75 | 387882 | 35164 | 0.63 | 0.68 | 0.27 | 2.65603959258879e-15 | 8.94925980326865e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | GJB6 | 10804 | 4288 | 0.63 | 0.23 | 0.008 | 1.07988427257173e-61 | 3.63856206800318e-57 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HLA-DMB | 3109 | 4935 | 0.63 | 0.53 | 0.12 | 1.56892678833576e-23 | 5.28634192061852e-19 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HOXB2 | 3212 | 5113 | 0.62 | 0.56 | 0.17 | 3.1218504027611e-17 | 1.05187627470632e-12 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | ARL4C | 10123 | 698 | 0.62 | 0.41 | 0.09 | 2.24332292072419e-18 | 7.55865224908809e-14 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SCUBE3 | 222663 | 13655 | 0.62 | 0.38 | 0.06 | 7.41407023195862e-23 | 2.49809682395614e-18 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | NR4A3 | 8013 | 7982 | 0.62 | 0.23 | 0.05 | 1.5148520032062e-10 | 5.10414233960297e-06 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | AKIRIN1 | 79647 | 25744 | 0.61 | 0.8 | 0.45 | 1.24532834781065e-12 | 4.1960093351132e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | AKAP12 | 9590 | 370 | 0.6 | 0.64 | 0.36 | 1.12054774749268e-06 | 0.03 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PTP4A1 | 7803 | 9634 | 0.6 | 0.73 | 0.33 | 2.73085167038116e-13 | 9.20133161818228e-09 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | NR4A1 | 3164 | 7980 | 0.6 | 0.55 | 0.26 | 3.74053384500459e-07 | 0.01 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | MGLL | 11343 | 17038 | 0.59 | 0.44 | 0.04 | 3.10671995785444e-48 | 1.04677822259948e-43 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PRKAG2 | 51422 | 9386 | 0.58 | 0.43 | 0.05 | 2.60682143506932e-36 | 8.78342414332256e-32 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | EIF3F | 8665 | 3275 | 0.58 | 0.97 | 0.71 | 1.1478811471168e-10 | 3.86767073709535e-06 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | NUDT4 | 11163 | 8051 | 0.58 | 0.62 | 0.32 | 7.51307515557313e-10 | 2.53145554291881e-05 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | NAMPT | 10135 | 30092 | 0.58 | 0.62 | 0.16 | 4.36255766853556e-22 | 1.46992018083637e-17 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | KCNJ15 | 3772 | 6261 | 0.57 | 0.41 | 0.06 | 6.98935528781655e-28 | 2.35499337067691e-23 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HSP90AA1 | 3320 | 5253 | 0.57 | 1 | 0.98 | 5.21237910920053e-17 | 1.75625901705403e-12 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SPON1 | 10418 | 11252 | 0.57 | 0.4 | 0.08 | 1.51978496973987e-17 | 5.12076347704151e-13 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RIPK4 | 54101 | 496 | 0.57 | 0.46 | 0.11 | 4.73198946950871e-19 | 1.59439653185626e-14 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RPL12 | 6136 | 10302 | 0.57 | 1 | 0.97 | 1.60767500273934e-21 | 5.41690015422992e-17 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TBC1D4 | 9882 | 19165 | 0.57 | 0.4 | 0.05 | 2.67789105637936e-29 | 9.02288612536462e-25 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | NBEAL1 | 65065 | 20681 | 0.56 | 0.95 | 0.69 | 6.87757016048503e-12 | 2.31732848987383e-07 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CKS2 | 1164 | 2000 | 0.56 | 0.77 | 0.37 | 6.70555200742952e-13 | 2.2593686933833e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CCDC198 | 55195 | 20189 | 0.56 | 0.62 | 0.16 | 6.27726218279229e-22 | 2.11506071987003e-17 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | DMKN | 93099 | 25063 | 0.56 | 0.52 | 0.13 | 1.10411648064537e-20 | 3.7202100698865e-16 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | TMEM243 | 79161 | 21707 | 0.56 | 0.47 | 0.17 | 9.44033559371212e-12 | 3.18082667494536e-07 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SOSTDC1 | 25928 | 21748 | 0.55 | 0.41 | 0.05 | 1.36491959119364e-34 | 4.59896007056785e-30 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RPL39 | 6170 | 10350 | 0.55 | 1 | 0.94 | 8.73352270606511e-21 | 2.94267314058158e-16 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RPS20 | 6224 | 10405 | 0.55 | 1 | 0.94 | 2.31504087841732e-20 | 7.80029873573931e-16 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RND3 | 390 | 671 | 0.55 | 0.52 | 0.17 | 4.23430195396164e-13 | 1.42670570036783e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LTA4H | 4048 | 6710 | 0.55 | 0.55 | 0.2 | 4.10387485702363e-13 | 1.38275959432554e-08 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | CDC42SE2 | 56990 | 18547 | 0.55 | 0.61 | 0.18 | 1.01380708643569e-17 | 3.41592159703643e-13 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PIM3 | 415116 | 19310 | 0.55 | 0.53 | 0.17 | 1.10867376947637e-13 | 3.73556539887367e-09 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | SMS | 6611 | 11123 | 0.54 | 0.77 | 0.45 | 1.25275982254497e-08 | 0.000422104894608304 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RPS17 | 6218 | 10397 | 0.54 | 1 | 0.95 | 2.15370744573673e-19 | 7.25670186766533e-15 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | LDOC1 | 23641 | 6548 | 0.54 | 0.59 | 0.19 | 9.21274986546406e-16 | 3.10414393966946e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | GTPBP4 | 23560 | 21535 | 0.54 | 0.59 | 0.23 | 2.80542319849053e-13 | 9.452592924994e-09 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | HSPD1 | 3329 | 5261 | 0.54 | 0.97 | 0.75 | 1.3906036894097e-10 | 4.68550007109705e-06 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RPLP0 | 6175 | 10371 | 0.54 | 1 | 0.96 | 3.33685083446821e-19 | 1.12431852016572e-14 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | RNF144B | 255488 | 21578 | 0.53 | 0.16 | 0.01 | 9.47149009868573e-16 | 3.19132387385117e-11 |
75 | 18 | SSBm/d | S-shaped body medial/distal | wk18 | PDGFA | 5154 | 8799 | 0.53 | 0.49 | 0.14 | 5.83376187040041e-15 | 1.96562772461271e-10 |