Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | IGFBP7 | 3490 | 5476 | 1.18 | 0.87 | 0.62 | 7.52007721172907e-41 | 2.53381481571999e-36 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PAX8 | 7849 | 8622 | 1.11 | 0.92 | 0.39 | 1.95795935417033e-80 | 6.59714824794152e-76 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | TPM1 | 7168 | 12010 | 1.06 | 0.94 | 0.59 | 2.30140315280564e-51 | 7.75434778306331e-47 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ADAMTS1 | 9510 | 217 | 0.95 | 0.77 | 0.26 | 2.64598361674108e-64 | 8.9153771982474e-60 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PCP4 | 5121 | 8742 | 0.94 | 0.39 | 0.06 | 6.00636943589828e-62 | 2.02378611773157e-57 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PMP22 | 5376 | 9118 | 0.91 | 0.54 | 0.17 | 1.24212761251076e-43 | 4.18522477759376e-39 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | C1QTNF12 | 388581 | 32308 | 0.87 | 0.44 | 0.09 | 1.52509304435706e-55 | 5.13864850365668e-51 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | AKAP12 | 9590 | 370 | 0.86 | 0.8 | 0.34 | 8.17103797073969e-52 | 2.75314953386103e-47 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | LYPD1 | 116372 | 28431 | 0.85 | 0.69 | 0.24 | 1.30675839601544e-46 | 4.40299173953443e-42 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | QPRT | 23475 | 9755 | 0.81 | 0.78 | 0.49 | 2.55806940493836e-31 | 8.61915905299931e-27 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | LAMP5 | 24141 | 16097 | 0.78 | 0.36 | 0.09 | 1.01805800096428e-37 | 3.43024462844904e-33 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SH3KBP1 | 30011 | 13867 | 0.76 | 0.58 | 0.16 | 1.11000333017314e-53 | 3.74004522068537e-49 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SLIT3 | 6586 | 11087 | 0.76 | 0.5 | 0.1 | 2.80482382995744e-63 | 9.45057341265861e-59 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | LRRTM1 | 347730 | 19408 | 0.76 | 0.47 | 0.11 | 7.43634134405545e-52 | 2.50560085246604e-47 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | KRT19 | 3880 | 6436 | 0.75 | 0.66 | 0.27 | 1.17842910226876e-40 | 3.97059901718434e-36 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CDH6 | 1004 | 1765 | 0.73 | 0.57 | 0.21 | 3.3099912311703e-35 | 1.11526844543052e-30 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CAV2 | 858 | 1528 | 0.73 | 0.38 | 0.09 | 4.10768947831502e-41 | 1.38404489282346e-36 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ID1 | 3397 | 5360 | 0.71 | 0.87 | 0.52 | 5.25823127309877e-35 | 1.7717084451579e-30 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | EMID1 | 129080 | 18036 | 0.7 | 0.59 | 0.24 | 1.32518351573737e-34 | 4.4650733379255e-30 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ALDH1A1 | 216 | 402 | 0.68 | 0.49 | 0.16 | 4.43649899370345e-34 | 1.49483397093844e-29 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | TSPAN12 | 23554 | 21641 | 0.68 | 0.73 | 0.38 | 5.89509074862414e-31 | 1.98629187684142e-26 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | MAOB | 4129 | 6834 | 0.67 | 0.41 | 0.09 | 9.01981399672645e-46 | 3.03913612805701e-41 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | IGFBP4 | 3487 | 5473 | 0.66 | 0.86 | 0.51 | 5.43690618318164e-34 | 1.83191116936122e-29 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | DSP | 1832 | 3052 | 0.65 | 0.51 | 0.18 | 1.41879107168413e-33 | 4.78047463693251e-29 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | KIF12 | 113220 | 21495 | 0.63 | 0.49 | 0.17 | 2.0570744598894e-31 | 6.93110668515136e-27 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | DCDC2 | 51473 | 18141 | 0.62 | 0.53 | 0.23 | 1.37005282540952e-25 | 4.61625598993485e-21 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | GLIPR2 | 152007 | 18007 | 0.61 | 0.48 | 0.2 | 2.97946960223231e-24 | 1.00390248777616e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SULF1 | 23213 | 20391 | 0.6 | 0.42 | 0.15 | 3.45289752078736e-24 | 1.16341929065409e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ERP27 | 121506 | 26495 | 0.59 | 0.29 | 0.04 | 8.85447340359617e-49 | 2.98342626860769e-44 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | MEST | 4232 | 7028 | 0.59 | 0.89 | 0.71 | 3.17563806936466e-18 | 1.06999949109173e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | COL18A1 | 80781 | 2195 | 0.58 | 0.73 | 0.47 | 2.07506499505186e-22 | 6.99172399432773e-18 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CCN2 | 1490 | 2500 | 0.58 | 0.89 | 0.77 | 1.1996739764137e-11 | 4.04218149612832e-07 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | NTN4 | 59277 | 13658 | 0.57 | 0.26 | 0.06 | 2.18246605911183e-28 | 7.3536011395714e-24 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CYYR1 | 116159 | 16274 | 0.57 | 0.47 | 0.15 | 2.46920885515438e-35 | 8.31975231655716e-31 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PLAT | 5327 | 9051 | 0.57 | 0.44 | 0.15 | 1.66312618298274e-27 | 5.60373736094203e-23 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CADM1 | 23705 | 5951 | 0.57 | 0.76 | 0.38 | 3.79581340801409e-28 | 1.27896136969627e-23 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CAV1 | 857 | 1527 | 0.55 | 0.25 | 0.02 | 3.19516598608889e-59 | 1.07657922735279e-54 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PLOD2 | 5352 | 9082 | 0.55 | 0.78 | 0.43 | 5.87088409454664e-23 | 1.97813568681654e-18 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | DAPL1 | 92196 | 21490 | 0.53 | 0.41 | 0.12 | 2.76047433642194e-28 | 9.30114222914007e-24 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | WDR86 | 349136 | 28020 | 0.53 | 0.32 | 0.1 | 1.67355798855975e-23 | 5.63888628665321e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | APELA | 100506013 | 48925 | 0.53 | 0.22 | 0.04 | 2.55902192779611e-29 | 8.62236848351622e-25 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | LHX1 | 3975 | 6593 | 0.52 | 0.47 | 0.22 | 1.63179716623901e-17 | 5.49817737192572e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | MGST1 | 4257 | 7061 | 0.52 | 0.38 | 0.14 | 2.86770145499885e-22 | 9.66243328247312e-18 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | APEX1 | 328 | 587 | 0.51 | 0.82 | 0.58 | 9.4579109558851e-21 | 3.18674851747593e-16 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CLEC18B | 497190 | 33849 | 0.51 | 0.44 | 0.17 | 6.92330457926357e-23 | 2.33273824493707e-18 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SERINC5 | 256987 | 18825 | 0.51 | 0.45 | 0.22 | 5.78315711976719e-17 | 1.94857695993436e-12 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPLP0 | 6175 | 10371 | 0.5 | 1 | 0.96 | 8.81152144844701e-49 | 2.96895403683974e-44 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CCND1 | 595 | 1582 | 0.49 | 0.54 | 0.31 | 2.29243963913602e-10 | 7.7241461201049e-06 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | NRGN | 4900 | 8000 | 0.48 | 0.33 | 0.06 | 1.9189076024731e-44 | 6.46556727577287e-40 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | IFITM3 | 10410 | 5414 | 0.48 | 0.79 | 0.7 | 1.41466804084965e-06 | 0.04 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | APP | 351 | 620 | 0.48 | 0.91 | 0.72 | 4.79466067170156e-19 | 1.61551296672312e-14 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PAX2 | 5076 | 8616 | 0.48 | 0.64 | 0.31 | 4.07810738255505e-24 | 1.3740775014781e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RHOBTB3 | 22836 | 18757 | 0.48 | 0.55 | 0.26 | 6.5247770020284e-22 | 2.19845836306345e-17 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RBP1 | 5947 | 9919 | 0.48 | 0.81 | 0.44 | 6.55713899600801e-24 | 2.20936241331494e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | BEX1 | 55859 | 1036 | 0.48 | 0.62 | 0.33 | 6.52389395654856e-18 | 2.19816082971947e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPL5 | 6125 | 10360 | 0.47 | 1 | 0.98 | 1.99971203362528e-47 | 6.73782972609703e-43 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CREG1 | 8804 | 2351 | 0.47 | 0.62 | 0.32 | 7.65347234644463e-22 | 2.57876097241106e-17 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | HSPA2 | 3306 | 5235 | 0.46 | 0.32 | 0.14 | 9.18684738897971e-13 | 3.09541635924282e-08 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PDGFD | 80310 | 30620 | 0.46 | 0.29 | 0.06 | 4.38154552979085e-33 | 1.47631795080773e-28 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | GRB14 | 2888 | 4565 | 0.46 | 0.33 | 0.08 | 4.55786951065372e-31 | 1.53572855291967e-26 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | OLFM3 | 118427 | 17990 | 0.46 | 0.38 | 0.18 | 9.57966018671347e-12 | 3.22777070331124e-07 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SYTL2 | 54843 | 15585 | 0.46 | 0.27 | 0.09 | 9.70086236082402e-16 | 3.26860856385605e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CDH12 | 1010 | 1751 | 0.45 | 0.26 | 0.05 | 6.60945553484868e-33 | 2.22698994791191e-28 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | LIX1 | 167410 | 18581 | 0.45 | 0.18 | 0.01 | 2.94021616883453e-50 | 9.90676435927108e-46 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPS13 | 6207 | 10386 | 0.45 | 0.99 | 0.97 | 1.20843388602554e-41 | 4.07169713557444e-37 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ADAM10 | 102 | 188 | 0.45 | 0.51 | 0.27 | 4.66236132941314e-16 | 1.57093602633246e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | BMP4 | 652 | 1071 | 0.45 | 0.44 | 0.19 | 2.52555806891211e-19 | 8.50961535739246e-15 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CCDC198 | 55195 | 20189 | 0.44 | 0.39 | 0.15 | 9.23080983932027e-20 | 3.11022906726057e-15 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PCBD1 | 5092 | 8646 | 0.44 | 0.77 | 0.54 | 3.29033874552339e-15 | 1.10864673691665e-10 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PDCD4 | 27250 | 8763 | 0.43 | 0.46 | 0.23 | 5.07930342495347e-16 | 1.71142049600382e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ID3 | 3399 | 5362 | 0.43 | 0.93 | 0.85 | 6.13195050596339e-15 | 2.06609940347931e-10 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPS2 | 6187 | 10404 | 0.42 | 1 | 0.99 | 1.91474913662096e-38 | 6.45155574093066e-34 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ZNF770 | 54989 | 26061 | 0.42 | 0.44 | 0.22 | 6.16135407228216e-16 | 2.07600664111475e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | BMP7 | 655 | 1074 | 0.42 | 0.58 | 0.31 | 1.56920505331053e-15 | 5.28727950662452e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | BICC1 | 80114 | 19351 | 0.42 | 0.33 | 0.15 | 1.14682153264934e-12 | 3.86410047210867e-08 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | KLK6 | 5653 | 6367 | 0.42 | 0.66 | 0.38 | 9.86799177668074e-15 | 3.32492114923481e-10 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | WSCD2 | 9671 | 29117 | 0.42 | 0.22 | 0.02 | 1.11894005384598e-55 | 3.77015661742864e-51 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | COL13A1 | 1305 | 2190 | 0.41 | 0.32 | 0.15 | 6.33372029233856e-11 | 2.13408371530055e-06 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPL35A | 6165 | 10345 | 0.41 | 1 | 0.98 | 2.46062883301406e-47 | 8.29084278995757e-43 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | GAL3ST3 | 89792 | 24144 | 0.41 | 0.23 | 0.03 | 3.09258395012986e-41 | 1.04201523615675e-36 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | FSCN1 | 6624 | 11148 | 0.41 | 0.64 | 0.36 | 3.571683591016e-16 | 1.20344306915693e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ANK3 | 288 | 494 | 0.41 | 0.33 | 0.13 | 2.27893187395375e-15 | 7.67863305609976e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RACK1 | 10399 | 4399 | 0.41 | 1 | 0.98 | 2.45686056782761e-38 | 8.27814599723833e-34 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPSA | 3921 | 6502 | 0.41 | 1 | 0.91 | 1.8321710878373e-27 | 6.17331726335902e-23 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | FBXO17 | 115290 | 18754 | 0.41 | 0.6 | 0.43 | 3.55751964652633e-11 | 1.19867066970058e-06 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CRTAC1 | 55118 | 14882 | 0.41 | 0.25 | 0.1 | 4.74539686766365e-12 | 1.59891402059059e-07 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | HNF1B | 6928 | 11630 | 0.4 | 0.36 | 0.15 | 1.23156910387973e-15 | 4.14964893861236e-11 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | PPA1 | 5464 | 9226 | 0.39 | 0.71 | 0.52 | 4.1998050871877e-13 | 1.41508232607702e-08 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | SEPTIN8 | 23176 | 16511 | 0.39 | 0.34 | 0.13 | 3.72176839026844e-18 | 1.25401264141705e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ENAH | 55740 | 18271 | 0.39 | 0.5 | 0.27 | 2.65119336078678e-13 | 8.93293090983497e-09 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | EIF3E | 3646 | 3277 | 0.39 | 0.98 | 0.88 | 1.00733033916568e-23 | 3.39409884478483e-19 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | HNRNPA1 | 3178 | 5031 | 0.39 | 1 | 0.98 | 2.73900444713589e-28 | 9.22880158417965e-24 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | RPL21 | 6144 | 10313 | 0.39 | 1 | 0.99 | 2.58068683286942e-44 | 8.69536621467023e-40 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | GRIN2A | 2903 | 4585 | 0.39 | 0.24 | 0.06 | 6.06653756358522e-23 | 2.0440591666744e-18 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | KRT8 | 3856 | 6446 | 0.38 | 0.37 | 0.22 | 7.36035381143504e-08 | 0.00247999761322492 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | CLU | 1191 | 2095 | 0.38 | 0.55 | 0.25 | 2.18801824758562e-19 | 7.37230868341498e-15 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | DPP4 | 1803 | 3009 | 0.38 | 0.39 | 0.16 | 9.11797446161057e-18 | 3.07221031509507e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | TRPM5 | 29850 | 14323 | 0.38 | 0.18 | 0.02 | 2.81602263215247e-35 | 9.48830665677454e-31 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | TTYH1 | 57348 | 13476 | 0.38 | 0.23 | 0.06 | 7.49108066422075e-18 | 2.52404471900254e-13 |
75 | 17 | RVCSBb | Renal vesicle/Comma-shaped body b | wk18 | ID2 | 3398 | 5361 | 0.38 | 0.78 | 0.6 | 2.9508700800142e-12 | 9.94266164759984e-08 |