Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CCND1 | 595 | 1582 | 1.36 | 0.84 | 0.3 | 1.24226517900699e-63 | 4.18568829414615e-59 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CD24 | 100133941 | 1645 | 1.22 | 0.97 | 0.42 | 8.40571415360616e-67 | 2.83222132691606e-62 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TUBB2B | 347733 | 30829 | 1.1 | 0.73 | 0.2 | 4.58060513392435e-65 | 1.54338909382447e-60 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | JAG1 | 182 | 6188 | 1.03 | 0.83 | 0.26 | 4.74141064326791e-64 | 1.59757090214269e-59 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TMSB15A | 11013 | 30744 | 1 | 0.75 | 0.22 | 8.41310175239806e-59 | 2.834710504453e-54 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HMGA1 | 3159 | 5010 | 0.99 | 0.9 | 0.33 | 1.69161315588448e-60 | 5.69972136743716e-56 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PCNA | 5111 | 8729 | 0.96 | 0.76 | 0.25 | 7.4677809147945e-53 | 2.51619410143086e-48 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MCM7 | 4176 | 6950 | 0.91 | 0.89 | 0.26 | 2.65503794377572e-71 | 8.94588484775791e-67 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | LHX1 | 3975 | 6593 | 0.89 | 0.76 | 0.21 | 9.82547682391208e-59 | 3.31059616104894e-54 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MCM3 | 4172 | 6945 | 0.88 | 0.75 | 0.23 | 2.88142849155272e-54 | 9.70868515943775e-50 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CADM1 | 23705 | 5951 | 0.85 | 0.9 | 0.38 | 4.29427822366005e-48 | 1.44691410468002e-43 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CXCR4 | 7852 | 2561 | 0.84 | 0.49 | 0.09 | 4.34796137323429e-53 | 1.46500210509756e-48 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SFRP2 | 6423 | 10777 | 0.81 | 0.39 | 0.06 | 1.68252549984316e-48 | 5.66910141917153e-44 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CALCA | 796 | 1437 | 0.81 | 0.48 | 0.06 | 2.1679557929336e-79 | 7.30471024871047e-75 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PAX2 | 5076 | 8616 | 0.81 | 0.84 | 0.3 | 4.30674558453976e-48 | 1.45111485725483e-43 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CENPV | 201161 | 29920 | 0.78 | 0.82 | 0.3 | 2.24801494462577e-48 | 7.57446155442208e-44 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PAX8 | 7849 | 8622 | 0.77 | 0.93 | 0.4 | 7.80191519849832e-45 | 2.62877730698202e-40 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | LYPD1 | 116372 | 28431 | 0.77 | 0.71 | 0.24 | 1.82074134010071e-36 | 6.13480587133532e-32 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | GINS2 | 51659 | 24575 | 0.76 | 0.61 | 0.13 | 4.48529358874836e-63 | 1.51127482179287e-58 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MDK | 4192 | 6972 | 0.75 | 1 | 0.66 | 1.02910953654209e-41 | 3.46748167242492e-37 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | LAMP5 | 24141 | 16097 | 0.75 | 0.52 | 0.08 | 1.0743574918298e-69 | 3.61994013297134e-65 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | H2AFZ | 3015 | 4741 | 0.74 | 1 | 0.76 | 1.54803131018038e-42 | 5.21593669652177e-38 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TTYH1 | 57348 | 13476 | 0.73 | 0.37 | 0.06 | 9.97230954992403e-48 | 3.3600699797514e-43 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | KRT18 | 3875 | 6430 | 0.72 | 0.82 | 0.32 | 1.96713168859419e-39 | 6.62805351154926e-35 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SINHCAF | 58516 | 30702 | 0.72 | 0.88 | 0.47 | 2.07043230777429e-33 | 6.9761146178147e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | KDM2B | 84678 | 13610 | 0.71 | 0.55 | 0.13 | 2.58821813013259e-45 | 8.72074216766875e-41 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | H2AFY | 9555 | 4740 | 0.7 | 0.96 | 0.51 | 3.20666175817972e-40 | 1.08045261280107e-35 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MYC | 4609 | 7553 | 0.7 | 0.66 | 0.26 | 2.23364868418175e-27 | 7.52605587648198e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | UNG | 7374 | 12572 | 0.7 | 0.63 | 0.18 | 2.70300091386734e-45 | 9.10749127918462e-41 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PODXL2 | 50512 | 17936 | 0.66 | 0.57 | 0.15 | 5.74888180582766e-44 | 1.93702823565557e-39 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SMS | 6611 | 11123 | 0.66 | 0.88 | 0.43 | 2.78900239154846e-34 | 9.39726465808337e-30 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | LDHB | 3945 | 6541 | 0.65 | 0.99 | 0.81 | 4.11225736949715e-38 | 1.38558399807837e-33 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | APEX1 | 328 | 587 | 0.65 | 0.97 | 0.58 | 8.09891848320831e-34 | 2.72884959373221e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | ENO1 | 2023 | 3350 | 0.65 | 0.99 | 0.67 | 2.56664391135562e-35 | 8.64804999492163e-31 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | BEX1 | 55859 | 1036 | 0.65 | 0.74 | 0.33 | 6.17075908041218e-28 | 2.07917556455408e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | DPP4 | 1803 | 3009 | 0.65 | 0.55 | 0.15 | 1.24036640129084e-37 | 4.17929055250937e-33 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | RANBP1 | 5902 | 9847 | 0.65 | 0.95 | 0.59 | 3.47833720036968e-34 | 1.17199093629256e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MCM5 | 4174 | 6948 | 0.65 | 0.58 | 0.12 | 4.00354453583456e-56 | 1.3489542959041e-51 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HEY1 | 23462 | 4880 | 0.64 | 0.77 | 0.27 | 6.11596806907814e-40 | 2.06071428119519e-35 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | EMX2 | 2018 | 3341 | 0.64 | 0.58 | 0.18 | 1.94569409320575e-36 | 6.55582167764746e-32 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | NASP | 4678 | 7644 | 0.64 | 0.85 | 0.42 | 2.14606863290345e-29 | 7.23096365170488e-25 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TYMS | 7298 | 12441 | 0.63 | 0.58 | 0.14 | 5.46437729017319e-44 | 1.84116728415095e-39 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | UHRF1 | 29128 | 12556 | 0.63 | 0.52 | 0.11 | 6.58571819528815e-48 | 2.21899188872039e-43 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PCLAF | 9768 | 28961 | 0.63 | 0.54 | 0.19 | 8.14798984759585e-26 | 2.74538369924895e-21 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | RPSA | 3921 | 6502 | 0.62 | 1 | 0.91 | 5.74204427815952e-49 | 1.93472439908307e-44 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CLEC18B | 497190 | 33849 | 0.6 | 0.58 | 0.17 | 1.85304934173046e-37 | 6.2436644520266e-33 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | FBL | 2091 | 3599 | 0.59 | 0.85 | 0.41 | 5.8514996041582e-31 | 1.97160427662506e-26 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PHGDH | 26227 | 8923 | 0.59 | 0.84 | 0.32 | 1.87311450048891e-36 | 6.31127199794735e-32 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CLU | 1191 | 2095 | 0.59 | 0.68 | 0.25 | 4.91945078526156e-32 | 1.65755974758603e-27 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | EPCAM | 4072 | 11529 | 0.59 | 0.79 | 0.35 | 1.31945290151761e-31 | 4.44576460637344e-27 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | ID1 | 3397 | 5360 | 0.59 | 0.84 | 0.53 | 1.12935406275006e-19 | 3.80524557903007e-15 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | IDH2 | 3418 | 5383 | 0.59 | 0.78 | 0.31 | 2.09528763991537e-36 | 7.05986217393083e-32 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MLLT11 | 10962 | 16997 | 0.58 | 0.67 | 0.26 | 1.02416037416841e-28 | 3.45080596472303e-24 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CDH6 | 1004 | 1765 | 0.57 | 0.57 | 0.21 | 8.19877377754112e-25 | 2.7624948366047e-20 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MARCKSL1 | 65108 | 7142 | 0.57 | 0.98 | 0.83 | 9.91851673951085e-36 | 3.34194503021079e-31 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CSRP2 | 1466 | 2470 | 0.57 | 0.6 | 0.2 | 1.65138517588058e-34 | 5.56417721161203e-30 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HMGB1 | 3146 | 4983 | 0.57 | 1 | 0.94 | 8.43548832988572e-35 | 2.84225343787169e-30 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | ETV4 | 2118 | 3493 | 0.56 | 0.36 | 0.07 | 2.39686636293719e-36 | 8.07600152328056e-32 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PKM | 5315 | 9021 | 0.55 | 0.96 | 0.73 | 6.21229047994223e-28 | 2.09316915431174e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | FSCN1 | 6624 | 11148 | 0.55 | 0.81 | 0.35 | 1.5189166514072e-28 | 5.11783776525141e-24 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HNRNPA1 | 3178 | 5031 | 0.55 | 1 | 0.98 | 2.08545300756919e-45 | 7.02672536370364e-41 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HNF1B | 6928 | 11630 | 0.55 | 0.49 | 0.15 | 3.31252816138596e-30 | 1.11612323869738e-25 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | LMNB1 | 4001 | 6637 | 0.55 | 0.58 | 0.17 | 4.7959967904607e-34 | 1.61596315857783e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SOX11 | 6664 | 11191 | 0.55 | 0.53 | 0.27 | 1.46805875255003e-14 | 4.94647716084206e-10 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | FXYD6 | 53826 | 4030 | 0.54 | 0.69 | 0.25 | 7.7349914913593e-30 | 2.6062280330986e-25 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PAICS | 10606 | 8587 | 0.53 | 0.72 | 0.27 | 2.06621435761789e-30 | 6.9619026565577e-26 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | C19orf48 | 84798 | 29667 | 0.53 | 0.68 | 0.3 | 6.08831086723912e-24 | 2.05139546360755e-19 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MSRB1 | 51734 | 14133 | 0.53 | 0.63 | 0.23 | 6.12288532668792e-28 | 2.06304498197423e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MCM2 | 4171 | 6944 | 0.53 | 0.51 | 0.12 | 1.82990585226169e-43 | 6.16568477861053e-39 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | OSR2 | 116039 | 15830 | 0.53 | 0.44 | 0.15 | 1.9215739749283e-21 | 6.47455135112343e-17 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | GAPDH | 2597 | 4141 | 0.53 | 1 | 0.97 | 5.25813506620906e-44 | 1.77167602920848e-39 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SYTL2 | 54843 | 15585 | 0.52 | 0.34 | 0.09 | 3.28921362544492e-23 | 1.10826763895741e-18 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | IFITM2 | 10581 | 5413 | 0.52 | 0.74 | 0.38 | 1.19837740899016e-18 | 4.03781284185143e-14 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | DUSP6 | 1848 | 3072 | 0.52 | 0.45 | 0.13 | 7.50604127987757e-28 | 2.52908554884195e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | RPS2 | 6187 | 10404 | 0.52 | 1 | 0.99 | 6.43091640349885e-48 | 2.1668329729949e-43 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TK1 | 7083 | 11830 | 0.51 | 0.38 | 0.1 | 4.28098344475349e-27 | 1.44243456187524e-22 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | NME1 | 4830 | 7849 | 0.51 | 0.79 | 0.4 | 2.12220115439881e-22 | 7.15054456963134e-18 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PSMA2 | 5683 | 9531 | 0.51 | 0.89 | 0.75 | 1.48750908801906e-07 | 0.00501201312117141 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MAD2L1 | 4085 | 6763 | 0.51 | 0.55 | 0.16 | 1.96244762997868e-33 | 6.61227104445015e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | EEF1B2 | 1933 | 3208 | 0.51 | 0.98 | 0.73 | 1.47141011310126e-26 | 4.95776923508338e-22 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PARP1 | 142 | 270 | 0.51 | 0.76 | 0.38 | 2.32405471591487e-21 | 7.83066995980355e-17 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | DEK | 7913 | 2768 | 0.51 | 0.89 | 0.55 | 1.0236974708623e-21 | 3.44924625832344e-17 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | STMN1 | 3925 | 6510 | 0.51 | 1 | 0.94 | 6.24225550739313e-33 | 2.10326557066104e-28 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HLA-DMB | 3109 | 4935 | 0.51 | 0.39 | 0.11 | 2.86832674045492e-24 | 9.66454011928882e-20 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | TUBA1B | 10376 | 18809 | 0.51 | 0.98 | 0.81 | 1.00527052079685e-23 | 3.38715849277292e-19 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SNRPB | 6628 | 11153 | 0.5 | 0.94 | 0.67 | 4.45225439083266e-23 | 1.50014259444716e-18 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | SLBP | 7884 | 10904 | 0.49 | 0.75 | 0.37 | 2.42707025100518e-21 | 8.17777050373687e-17 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HSPD1 | 3329 | 5261 | 0.48 | 0.97 | 0.74 | 2.58982086314982e-26 | 8.726142416297e-22 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | UCHL1 | 7345 | 12513 | 0.48 | 0.5 | 0.18 | 6.70108104187878e-23 | 2.25786224625064e-18 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | PPA1 | 5464 | 9226 | 0.48 | 0.88 | 0.51 | 4.02026105623455e-20 | 1.35458676028767e-15 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | GLIPR2 | 152007 | 18007 | 0.48 | 0.58 | 0.2 | 2.3350008093538e-27 | 7.86755172703669e-23 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CD320 | 51293 | 16692 | 0.48 | 0.64 | 0.25 | 5.24668766580441e-25 | 1.76781894211614e-20 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | BAZ1A | 11177 | 960 | 0.48 | 0.57 | 0.23 | 1.06969918193869e-20 | 3.60424442362423e-16 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | HES6 | 55502 | 18254 | 0.48 | 0.43 | 0.09 | 9.97139434373659e-43 | 3.35976161017861e-38 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | MEX3A | 92312 | 33482 | 0.48 | 0.52 | 0.17 | 6.28175707945435e-27 | 2.11657523035135e-22 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | DNMT1 | 1786 | 2976 | 0.47 | 0.55 | 0.18 | 3.22089965763985e-27 | 1.08524993064517e-22 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | JPT1 | 51155 | 14569 | 0.47 | 0.73 | 0.33 | 4.63883500259646e-21 | 1.56300906577485e-16 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | YBX1 | 4904 | 8014 | 0.47 | 1 | 0.92 | 2.27492857526481e-33 | 7.66514434149725e-29 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | CENPU | 79682 | 21348 | 0.47 | 0.38 | 0.09 | 6.52479671032078e-31 | 2.19846500357548e-26 |
75 | 16 | RVCSBa | Renal vesicle/Comma-shaped body a | wk18 | DUT | 1854 | 3078 | 0.46 | 0.87 | 0.57 | 2.14114894584642e-14 | 7.21438725813494e-10 |