Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 15 | PTA | Pretubular aggregate | wk18 | HMGB2 | 3148 | 5000 | 1.65 | 0.99 | 0.41 | 4.03840390688864e-95 | 1.36069981238706e-90 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HIST1H4C | 8364 | 4787 | 1.48 | 0.73 | 0.17 | 2.40655288717521e-72 | 8.10863929804814e-68 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TUBA1B | 10376 | 18809 | 1.43 | 1 | 0.81 | 1.02744341689886e-80 | 3.46186784889903e-76 |
75 | 15 | PTA | Pretubular aggregate | wk18 | UBE2C | 11065 | 15937 | 1.43 | 0.76 | 0.06 | 3.37476162107842e-173 | 1.13709218060616e-168 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TOP2A | 7153 | 11989 | 1.36 | 0.8 | 0.07 | 7.34568158323086e-183 | 2.47505395265381e-178 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PCLAF | 9768 | 28961 | 1.33 | 0.94 | 0.17 | 1.8038487700971e-121 | 6.07788804596517e-117 |
75 | 15 | PTA | Pretubular aggregate | wk18 | MAD2L1 | 4085 | 6763 | 1.32 | 0.95 | 0.14 | 3.48702315327662e-162 | 1.17491758126502e-157 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PTTG1 | 9232 | 9690 | 1.31 | 0.85 | 0.16 | 2.42670612384014e-109 | 8.17654361366698e-105 |
75 | 15 | PTA | Pretubular aggregate | wk18 | NUSAP1 | 51203 | 18538 | 1.31 | 0.92 | 0.08 | 3.87173761601353e-201 | 1.3045432723396e-196 |
75 | 15 | PTA | Pretubular aggregate | wk18 | H2AFZ | 3015 | 4741 | 1.3 | 1 | 0.76 | 5.64324118746455e-81 | 1.9014336857043e-76 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CCND1 | 595 | 1582 | 1.26 | 0.82 | 0.3 | 1.80746368632843e-57 | 6.09006814471501e-53 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CENPF | 1063 | 1857 | 1.25 | 0.74 | 0.06 | 9.81487272047678e-175 | 3.30702321443745e-170 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TYMS | 7298 | 12441 | 1.23 | 0.86 | 0.13 | 2.4491816597305e-127 | 8.25227268429594e-123 |
75 | 15 | PTA | Pretubular aggregate | wk18 | BIRC5 | 332 | 593 | 1.2 | 0.81 | 0.05 | 3.38757410823681e-209 | 1.14140922002931e-204 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TK1 | 7083 | 11830 | 1.09 | 0.84 | 0.07 | 2.91106492871512e-176 | 9.80854217081273e-172 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HMGA1 | 3159 | 5010 | 1.06 | 0.96 | 0.33 | 1.08230692056132e-72 | 3.64672493813931e-68 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CCNB1 | 891 | 1579 | 1.06 | 0.66 | 0.08 | 4.66165173505572e-113 | 1.57069693560968e-108 |
75 | 15 | PTA | Pretubular aggregate | wk18 | MCM7 | 4176 | 6950 | 1.05 | 0.96 | 0.25 | 1.45871720122117e-87 | 4.91500173779461e-83 |
75 | 15 | PTA | Pretubular aggregate | wk18 | AURKB | 9212 | 11390 | 1.05 | 0.73 | 0.04 | 1.14445827628552e-205 | 3.85613771611644e-201 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PBK | 55872 | 18282 | 1.05 | 0.8 | 0.04 | 3.56717452609399e-235 | 1.20192378482211e-230 |
75 | 15 | PTA | Pretubular aggregate | wk18 | SMC4 | 10051 | 14013 | 1.04 | 0.89 | 0.19 | 5.4191252783848e-100 | 1.82592007129898e-95 |
75 | 15 | PTA | Pretubular aggregate | wk18 | UBE2T | 29089 | 25009 | 1.02 | 0.81 | 0.08 | 4.99721170266585e-157 | 1.68376051109623e-152 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CCNB2 | 9133 | 1580 | 1.01 | 0.63 | 0.06 | 1.68126678979986e-117 | 5.66486032155166e-113 |
75 | 15 | PTA | Pretubular aggregate | wk18 | RANBP1 | 5902 | 9847 | 1.01 | 1 | 0.59 | 4.08539781875165e-66 | 1.37653394105018e-61 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PCNA | 5111 | 8729 | 1.01 | 0.84 | 0.25 | 4.36815913639045e-61 | 1.4718075394154e-56 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDK1 | 983 | 1722 | 1.01 | 0.73 | 0.06 | 4.73085474199355e-156 | 1.59401419676731e-151 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TMSB15A | 11013 | 30744 | 1.01 | 0.92 | 0.21 | 7.13060847874541e-92 | 2.40258722082848e-87 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HMGB1 | 3146 | 4983 | 1.01 | 1 | 0.94 | 1.52430727985433e-75 | 5.13600094874119e-71 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TUBB | 203068 | 20778 | 1 | 1 | 0.9 | 3.97311548035396e-67 | 1.33870152995046e-62 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CKS1B | 1163 | 19083 | 1 | 0.89 | 0.31 | 2.23463528875826e-65 | 7.52938014194209e-61 |
75 | 15 | PTA | Pretubular aggregate | wk18 | LMNB1 | 4001 | 6637 | 0.99 | 0.88 | 0.16 | 2.31541971788057e-113 | 7.80157519742679e-109 |
75 | 15 | PTA | Pretubular aggregate | wk18 | ZWINT | 11130 | 13195 | 0.96 | 0.84 | 0.11 | 1.71371385841959e-136 | 5.77418747455897e-132 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDC20 | 991 | 1723 | 0.95 | 0.57 | 0.05 | 5.68317194932846e-113 | 1.91488795660673e-108 |
75 | 15 | PTA | Pretubular aggregate | wk18 | MKI67 | 4288 | 7107 | 0.9 | 0.69 | 0.05 | 1.4847434368981e-167 | 5.00269453628447e-163 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CKS2 | 1164 | 2000 | 0.9 | 0.87 | 0.35 | 6.32546556780112e-43 | 2.13130236841491e-38 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CALCA | 796 | 1437 | 0.89 | 0.53 | 0.06 | 3.02106281276867e-94 | 1.01791690413428e-89 |
75 | 15 | PTA | Pretubular aggregate | wk18 | RRM2 | 6241 | 10452 | 0.89 | 0.69 | 0.04 | 8.28304561075855e-172 | 2.79088938808898e-167 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CENPV | 201161 | 29920 | 0.87 | 0.92 | 0.3 | 9.66282843582739e-63 | 3.25579341316768e-58 |
75 | 15 | PTA | Pretubular aggregate | wk18 | LYPD1 | 116372 | 28431 | 0.85 | 0.8 | 0.24 | 4.24543949025608e-50 | 1.43045838184688e-45 |
75 | 15 | PTA | Pretubular aggregate | wk18 | ANP32E | 81611 | 16673 | 0.85 | 0.87 | 0.24 | 1.01956706448226e-69 | 3.43532926706654e-65 |
75 | 15 | PTA | Pretubular aggregate | wk18 | H2AFX | 3014 | 4739 | 0.85 | 0.7 | 0.17 | 1.34311690040641e-58 | 4.52549808422935e-54 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HMGN2 | 3151 | 4986 | 0.85 | 0.99 | 0.91 | 2.39466974408159e-57 | 8.0686002357085e-53 |
75 | 15 | PTA | Pretubular aggregate | wk18 | H2AFY | 9555 | 4740 | 0.85 | 0.97 | 0.51 | 7.10397821475547e-57 | 2.39361441967971e-52 |
75 | 15 | PTA | Pretubular aggregate | wk18 | LHX1 | 3975 | 6593 | 0.85 | 0.77 | 0.21 | 3.28999511037937e-56 | 1.10853095249122e-51 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PIMREG | 54478 | 25483 | 0.84 | 0.62 | 0.05 | 4.11558669553098e-146 | 1.38670578119221e-141 |
75 | 15 | PTA | Pretubular aggregate | wk18 | UHRF1 | 29128 | 12556 | 0.84 | 0.66 | 0.11 | 3.97573052983474e-80 | 1.33958264472252e-75 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CENPM | 79019 | 18352 | 0.83 | 0.75 | 0.05 | 3.88205698948026e-188 | 1.30802028203548e-183 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TPX2 | 22974 | 1249 | 0.83 | 0.53 | 0.05 | 8.83518819020361e-110 | 2.9769283088072e-105 |
75 | 15 | PTA | Pretubular aggregate | wk18 | FEN1 | 2237 | 3650 | 0.82 | 0.75 | 0.13 | 1.44945821661553e-91 | 4.88380451506437e-87 |
75 | 15 | PTA | Pretubular aggregate | wk18 | STMN1 | 3925 | 6510 | 0.8 | 1 | 0.94 | 4.57242330545364e-65 | 1.54063230853955e-60 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HMGB3 | 3149 | 5004 | 0.8 | 0.85 | 0.24 | 1.73194394860106e-61 | 5.83561194041642e-57 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PRC1 | 9055 | 9341 | 0.8 | 0.68 | 0.07 | 1.16933992196956e-118 | 3.93997393308423e-114 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HEY1 | 23462 | 4880 | 0.8 | 0.78 | 0.27 | 1.01121557532241e-40 | 3.40718975949133e-36 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TUBB2B | 347733 | 30829 | 0.79 | 0.62 | 0.21 | 4.21977616338522e-34 | 1.42181138049102e-29 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PLK1 | 5347 | 9077 | 0.79 | 0.44 | 0.02 | 2.72185357651804e-129 | 9.17101344071989e-125 |
75 | 15 | PTA | Pretubular aggregate | wk18 | DEK | 7913 | 2768 | 0.78 | 0.96 | 0.55 | 6.30055163072075e-49 | 2.12290786645505e-44 |
75 | 15 | PTA | Pretubular aggregate | wk18 | MCM3 | 4172 | 6945 | 0.77 | 0.75 | 0.23 | 2.98633826908814e-46 | 1.00621681638656e-41 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CCNA2 | 890 | 1578 | 0.77 | 0.57 | 0.04 | 2.10353133688806e-131 | 7.08763848651064e-127 |
75 | 15 | PTA | Pretubular aggregate | wk18 | NUF2 | 83540 | 14621 | 0.76 | 0.63 | 0.03 | 1.65961219703101e-175 | 5.59189733667629e-171 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PHGDH | 26227 | 8923 | 0.75 | 0.89 | 0.32 | 3.94854564289354e-47 | 1.33042296891655e-42 |
75 | 15 | PTA | Pretubular aggregate | wk18 | ASF1B | 55723 | 20996 | 0.75 | 0.67 | 0.04 | 2.59094507216847e-172 | 8.72993032616445e-168 |
75 | 15 | PTA | Pretubular aggregate | wk18 | JAG1 | 182 | 6188 | 0.74 | 0.84 | 0.26 | 4.86708088080302e-52 | 1.63991423197777e-47 |
75 | 15 | PTA | Pretubular aggregate | wk18 | SGO1 | 151648 | 25088 | 0.74 | 0.66 | 0.04 | 2.19413602791615e-183 | 7.39292193246068e-179 |
75 | 15 | PTA | Pretubular aggregate | wk18 | DTYMK | 1841 | 3061 | 0.73 | 0.84 | 0.21 | 9.36483266118546e-71 | 3.15538671685983e-66 |
75 | 15 | PTA | Pretubular aggregate | wk18 | RNASEH2A | 10535 | 18518 | 0.73 | 0.73 | 0.12 | 7.07147929467118e-93 | 2.38266423354651e-88 |
75 | 15 | PTA | Pretubular aggregate | wk18 | EZH2 | 2146 | 3527 | 0.73 | 0.72 | 0.12 | 2.62814903345153e-91 | 8.85528535331159e-87 |
75 | 15 | PTA | Pretubular aggregate | wk18 | IDH2 | 3418 | 5383 | 0.73 | 0.91 | 0.3 | 1.53207081334548e-51 | 5.16215939848626e-47 |
75 | 15 | PTA | Pretubular aggregate | wk18 | RAN | 5901 | 9846 | 0.73 | 0.98 | 0.79 | 9.21543609235252e-56 | 3.10504903695726e-51 |
75 | 15 | PTA | Pretubular aggregate | wk18 | SFRP2 | 6423 | 10777 | 0.73 | 0.45 | 0.06 | 8.41896613739026e-65 | 2.83668645033228e-60 |
75 | 15 | PTA | Pretubular aggregate | wk18 | NASP | 4678 | 7644 | 0.72 | 0.92 | 0.41 | 1.48309795591387e-38 | 4.99715025265621e-34 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TMPO | 7112 | 11875 | 0.72 | 0.82 | 0.23 | 8.02213748609429e-58 | 2.70297900456461e-53 |
75 | 15 | PTA | Pretubular aggregate | wk18 | GINS2 | 51659 | 24575 | 0.72 | 0.66 | 0.12 | 7.54984734216125e-67 | 2.54384556346781e-62 |
75 | 15 | PTA | Pretubular aggregate | wk18 | GTSE1 | 51512 | 13698 | 0.71 | 0.53 | 0.04 | 2.50380195745488e-126 | 8.43631031544846e-122 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDCA3 | 83461 | 14624 | 0.71 | 0.55 | 0.03 | 5.4140841240312e-164 | 1.82422150475107e-159 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TACC3 | 10460 | 11524 | 0.71 | 0.64 | 0.05 | 3.18948689935889e-150 | 1.07466571586999e-145 |
75 | 15 | PTA | Pretubular aggregate | wk18 | KRT18 | 3875 | 6430 | 0.71 | 0.81 | 0.32 | 7.17503624828603e-33 | 2.41755671349749e-28 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CD24 | 100133941 | 1645 | 0.71 | 0.95 | 0.42 | 1.406721265379e-35 | 4.73980663156801e-31 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PARP1 | 142 | 270 | 0.71 | 0.9 | 0.37 | 5.92892912284296e-38 | 1.99769337865071e-33 |
75 | 15 | PTA | Pretubular aggregate | wk18 | HNRNPAB | 3182 | 5034 | 0.7 | 0.94 | 0.37 | 3.2571941264034e-46 | 1.09747898895036e-41 |
75 | 15 | PTA | Pretubular aggregate | wk18 | DUT | 1854 | 3078 | 0.7 | 0.92 | 0.57 | 1.83741321042995e-25 | 6.19098007122269e-21 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CENPU | 79682 | 21348 | 0.69 | 0.67 | 0.07 | 5.30186158599536e-117 | 1.78640924278528e-112 |
75 | 15 | PTA | Pretubular aggregate | wk18 | UBE2S | 27338 | 17895 | 0.69 | 0.71 | 0.23 | 4.81221797222521e-39 | 1.62142872356156e-34 |
75 | 15 | PTA | Pretubular aggregate | wk18 | JPT1 | 51155 | 14569 | 0.69 | 0.79 | 0.33 | 1.7972085133779e-30 | 6.05551436497549e-26 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDCA5 | 113130 | 14626 | 0.68 | 0.61 | 0.04 | 1.19578437072533e-148 | 4.02907585872194e-144 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TMEM97 | 27346 | 28106 | 0.68 | 0.78 | 0.19 | 2.32564290182948e-63 | 7.83602119342424e-59 |
75 | 15 | PTA | Pretubular aggregate | wk18 | GGH | 8836 | 4248 | 0.68 | 0.8 | 0.19 | 3.40865197538813e-65 | 1.14851119658728e-60 |
75 | 15 | PTA | Pretubular aggregate | wk18 | PAX8 | 7849 | 8622 | 0.68 | 0.94 | 0.4 | 1.81582509317316e-40 | 6.11824106893765e-36 |
75 | 15 | PTA | Pretubular aggregate | wk18 | BEX1 | 55859 | 1036 | 0.68 | 0.84 | 0.32 | 2.73862740240062e-38 | 9.22753116964864e-34 |
75 | 15 | PTA | Pretubular aggregate | wk18 | TUBA1C | 84790 | 20768 | 0.67 | 0.62 | 0.16 | 2.20519499577504e-45 | 7.43018401876443e-41 |
75 | 15 | PTA | Pretubular aggregate | wk18 | LSM4 | 25804 | 17259 | 0.67 | 0.94 | 0.46 | 3.77797380000973e-42 | 1.27295049217528e-37 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDCA4 | 55038 | 14625 | 0.67 | 0.69 | 0.1 | 2.55586342415189e-86 | 8.61172622133737e-82 |
75 | 15 | PTA | Pretubular aggregate | wk18 | RRM1 | 6240 | 10451 | 0.66 | 0.71 | 0.15 | 2.48649755931095e-63 | 8.37800487634232e-59 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CDT1 | 81620 | 24576 | 0.66 | 0.6 | 0.08 | 8.03148492821271e-86 | 2.70612853171199e-81 |
75 | 15 | PTA | Pretubular aggregate | wk18 | KIF22 | 3835 | 6391 | 0.66 | 0.74 | 0.16 | 1.06683968630298e-64 | 3.59460963902928e-60 |
75 | 15 | PTA | Pretubular aggregate | wk18 | SMC2 | 10592 | 14011 | 0.65 | 0.77 | 0.15 | 1.40270643551766e-75 | 4.7262790638332e-71 |
75 | 15 | PTA | Pretubular aggregate | wk18 | DHFR | 1719 | 2861 | 0.65 | 0.63 | 0.1 | 2.45079586595301e-80 | 8.25771159074208e-76 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CLSPN | 63967 | 19715 | 0.65 | 0.54 | 0.06 | 1.14823635476375e-96 | 3.86886757374098e-92 |
75 | 15 | PTA | Pretubular aggregate | wk18 | DNAJC9 | 23234 | 19123 | 0.65 | 0.72 | 0.18 | 9.29049499635096e-56 | 3.13033938407049e-51 |
75 | 15 | PTA | Pretubular aggregate | wk18 | CENPA | 1058 | 1851 | 0.64 | 0.41 | 0.02 | 1.33620738327537e-102 | 4.50221715720803e-98 |
75 | 15 | PTA | Pretubular aggregate | wk18 | SPC25 | 57405 | 24031 | 0.64 | 0.52 | 0.03 | 1.84977330626595e-145 | 6.2326261781325e-141 |