Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 13 | Pod | Podocyte | wk18 | PODXL | 5420 | 9171 | 2.49 | 0.99 | 0.25 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | AIF1 | 199 | 352 | 2.34 | 0.9 | 0.08 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | THSD7A | 221981 | 22207 | 2.34 | 0.94 | 0.14 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | CLIC5 | 53405 | 13517 | 2.32 | 0.95 | 0.15 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | NPHS2 | 7827 | 13394 | 2.31 | 0.97 | 0.13 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | TPPP3 | 51673 | 24162 | 2.24 | 0.94 | 0.15 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | MME | 4311 | 7154 | 2.22 | 0.93 | 0.12 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | PTPRO | 5800 | 9678 | 2.07 | 0.9 | 0.11 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | SOST | 50964 | 13771 | 2.01 | 0.92 | 0.15 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | S100A6 | 6277 | 10496 | 1.92 | 0.95 | 0.31 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | MYL9 | 10398 | 15754 | 1.85 | 0.98 | 0.43 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | MPP5 | 64398 | 18669 | 1.83 | 0.85 | 0.18 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | PDLIM2 | 64236 | 13992 | 1.75 | 0.87 | 0.22 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | MXRA8 | 54587 | 7542 | 1.74 | 0.97 | 0.39 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | PTH1R | 5745 | 9608 | 1.7 | 0.73 | 0.09 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | CXCL12 | 6387 | 10672 | 1.7 | 0.77 | 0.26 | 2.1345335134429E-239 | 7.1920972201944E-235 |
| 75 | 13 | Pod | Podocyte | wk18 | MAFB | 9935 | 6408 | 1.68 | 0.99 | 0.35 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | ST6GALNAC3 | 256435 | 19343 | 1.66 | 0.74 | 0.07 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | NES | 10763 | 7756 | 1.66 | 0.89 | 0.22 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | DDN | 23109 | 24458 | 1.65 | 0.61 | 0.01 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | ST3GAL6 | 10402 | 18080 | 1.61 | 0.73 | 0.08 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | ANXA2 | 302 | 537 | 1.61 | 0.97 | 0.49 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | TNNI1 | 7135 | 11945 | 1.57 | 0.7 | 0.17 | 1.218123126377E-222 | 4.1043440620148E-218 |
| 75 | 13 | Pod | Podocyte | wk18 | SPOCK2 | 9806 | 13564 | 1.57 | 0.82 | 0.24 | 4.2833430882394E-302 | 1.4432296201514E-297 |
| 75 | 13 | Pod | Podocyte | wk18 | SEMA3B | 7869 | 10724 | 1.54 | 0.83 | 0.22 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | MRGPRF | 116535 | 24828 | 1.51 | 0.62 | 0.04 | 1.9856948422442E-285 | 6.6906002014575E-281 |
| 75 | 13 | Pod | Podocyte | wk18 | CRB2 | 286204 | 18688 | 1.47 | 0.72 | 0.22 | 4.5073402643129E-215 | 1.5187032286576E-210 |
| 75 | 13 | Pod | Podocyte | wk18 | ARMH4 | 145407 | 19846 | 1.45 | 0.67 | 0.14 | 6.8187105582705E-247 | 2.2974963355036E-242 |
| 75 | 13 | Pod | Podocyte | wk18 | TGFBR3 | 7049 | 11774 | 1.45 | 0.68 | 0.1 | 9.8374534851516E-277 | 3.314631577287E-272 |
| 75 | 13 | Pod | Podocyte | wk18 | BST2 | 684 | 1119 | 1.44 | 0.93 | 0.41 | 5.6045835623343E-274 | 1.8884083854929E-269 |
| 75 | 13 | Pod | Podocyte | wk18 | TNNT2 | 7139 | 11949 | 1.41 | 0.59 | 0.11 | 6.6564979740315E-202 | 2.2428404273702E-197 |
| 75 | 13 | Pod | Podocyte | wk18 | RIPOR1 | 79567 | 25836 | 1.41 | 0.68 | 0.1 | 7.0960824266568E-270 | 2.3909540128377E-265 |
| 75 | 13 | Pod | Podocyte | wk18 | VASN | 114990 | 18517 | 1.39 | 0.81 | 0.27 | 6.5981333327817E-269 | 2.2231750451475E-264 |
| 75 | 13 | Pod | Podocyte | wk18 | GSN | 2934 | 4620 | 1.35 | 0.72 | 0.16 | 1.379298599292E-253 | 4.6474087004544E-249 |
| 75 | 13 | Pod | Podocyte | wk18 | SPARC | 6678 | 11219 | 1.35 | 0.99 | 0.74 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | CPXM1 | 56265 | 15771 | 1.35 | 0.86 | 0.49 | 8.951991089828E-236 | 3.0162838778066E-231 |
| 75 | 13 | Pod | Podocyte | wk18 | SHISA2 | 387914 | 20366 | 1.33 | 0.67 | 0.23 | 8.5221253752652E-176 | 2.8714449239418E-171 |
| 75 | 13 | Pod | Podocyte | wk18 | SPINT2 | 10653 | 11247 | 1.33 | 0.97 | 0.57 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | PLTP | 5360 | 9093 | 1.31 | 0.61 | 0.16 | 3.7732117186801E-186 | 1.2713459564921E-181 |
| 75 | 13 | Pod | Podocyte | wk18 | KLRB1 | 3820 | 6373 | 1.31 | 0.54 | 0.04 | 1.1376420750386E-226 | 3.8331712076349E-222 |
| 75 | 13 | Pod | Podocyte | wk18 | TUBB2A | 7280 | 12412 | 1.3 | 0.67 | 0.23 | 5.0559785652966E-185 | 1.703561417791E-180 |
| 75 | 13 | Pod | Podocyte | wk18 | WT1 | 7490 | 12796 | 1.3 | 0.98 | 0.55 | 8.1356818401966E-307 | 2.7412366392358E-302 |
| 75 | 13 | Pod | Podocyte | wk18 | NPHS1 | 4868 | 7908 | 1.3 | 0.74 | 0.17 | 2.0760337073193E-255 | 6.9949879734417E-251 |
| 75 | 13 | Pod | Podocyte | wk18 | GADD45A | 1647 | 4095 | 1.3 | 0.85 | 0.41 | 6.8465011319367E-241 | 2.3068600913947E-236 |
| 75 | 13 | Pod | Podocyte | wk18 | ACTN4 | 81 | 166 | 1.29 | 0.83 | 0.45 | 3.6824560616617E-231 | 1.2407667454163E-226 |
| 75 | 13 | Pod | Podocyte | wk18 | PLA2R1 | 22925 | 9042 | 1.29 | 0.49 | 0.04 | 3.1174748999237E-202 | 1.0504019927803E-197 |
| 75 | 13 | Pod | Podocyte | wk18 | TCF21 | 6943 | 11632 | 1.28 | 0.95 | 0.38 | 1.3155198801973E-274 | 4.4325126843369E-270 |
| 75 | 13 | Pod | Podocyte | wk18 | COL4A4 | 1286 | 2206 | 1.27 | 0.53 | 0.02 | 1.4356449209437E-241 | 4.8372619966277E-237 |
| 75 | 13 | Pod | Podocyte | wk18 | SRGAP1 | 57522 | 17382 | 1.26 | 0.75 | 0.26 | 1.5360186433705E-225 | 5.1754612169724E-221 |
| 75 | 13 | Pod | Podocyte | wk18 | ENPEP | 2028 | 3355 | 1.25 | 0.69 | 0.18 | 1.0732751907231E-211 | 3.6162934276225E-207 |
| 75 | 13 | Pod | Podocyte | wk18 | LTBP4 | 8425 | 6717 | 1.25 | 0.8 | 0.32 | 1.3035871216554E-221 | 4.3923064477056E-217 |
| 75 | 13 | Pod | Podocyte | wk18 | TYRO3 | 7301 | 12446 | 1.25 | 0.62 | 0.16 | 4.0228025193583E-191 | 1.3554430808726E-186 |
| 75 | 13 | Pod | Podocyte | wk18 | TJP1 | 7082 | 11827 | 1.22 | 0.75 | 0.28 | 4.6414156887287E-215 | 1.5638786021602E-210 |
| 75 | 13 | Pod | Podocyte | wk18 | RETREG1 | 54463 | 25964 | 1.21 | 0.59 | 0.09 | 1.0257492253151E-218 | 3.4561594397766E-214 |
| 75 | 13 | Pod | Podocyte | wk18 | SELENOP | 6414 | 10751 | 1.2 | 0.95 | 0.6 | 2.0374605754809E-273 | 6.8650196630254E-269 |
| 75 | 13 | Pod | Podocyte | wk18 | NTNG1 | 22854 | 23319 | 1.2 | 0.46 | 0.01 | 9.0147166115153E-218 | 3.037418615084E-213 |
| 75 | 13 | Pod | Podocyte | wk18 | LOX | 4015 | 6664 | 1.19 | 0.49 | 0.04 | 2.3959217217541E-200 | 8.0728186492782E-196 |
| 75 | 13 | Pod | Podocyte | wk18 | ARHGEF3 | 50650 | 683 | 1.16 | 0.58 | 0.1 | 9.6674439125197E-195 | 3.2573485518844E-190 |
| 75 | 13 | Pod | Podocyte | wk18 | CLDN5 | 7122 | 2047 | 1.16 | 0.75 | 0.21 | 3.1502264277889E-208 | 1.0614372925792E-203 |
| 75 | 13 | Pod | Podocyte | wk18 | VAMP2 | 6844 | 12643 | 1.16 | 0.89 | 0.53 | 1.3828789200471E-240 | 4.6594722332068E-236 |
| 75 | 13 | Pod | Podocyte | wk18 | HTRA1 | 5654 | 9476 | 1.16 | 0.5 | 0.05 | 8.8964647363362E-192 | 2.9975748282611E-187 |
| 75 | 13 | Pod | Podocyte | wk18 | SYNPO | 11346 | 30672 | 1.13 | 0.54 | 0.09 | 5.7287318263301E-191 | 1.9302389015637E-186 |
| 75 | 13 | Pod | Podocyte | wk18 | NPNT | 255743 | 27405 | 1.11 | 0.5 | 0.08 | 6.8526709228884E-167 | 2.308938940758E-162 |
| 75 | 13 | Pod | Podocyte | wk18 | IQGAP2 | 10788 | 6111 | 1.1 | 0.55 | 0.12 | 1.9538986050353E-170 | 6.5834659598059E-166 |
| 75 | 13 | Pod | Podocyte | wk18 | MAL2 | 114569 | 13634 | 1.08 | 0.47 | 0.11 | 4.1783175198143E-133 | 1.4078423051262E-128 |
| 75 | 13 | Pod | Podocyte | wk18 | SNCA | 6622 | 11138 | 1.08 | 0.64 | 0.23 | 1.1611957453472E-158 | 3.9125329443727E-154 |
| 75 | 13 | Pod | Podocyte | wk18 | DNAJB4 | 11080 | 14886 | 1.08 | 0.69 | 0.31 | 4.8165293361889E-147 | 1.6228813945355E-142 |
| 75 | 13 | Pod | Podocyte | wk18 | LOXL1 | 4016 | 6665 | 1.08 | 0.7 | 0.26 | 2.8536544191067E-166 | 9.6151031997381E-162 |
| 75 | 13 | Pod | Podocyte | wk18 | CITED2 | 10370 | 1987 | 1.05 | 0.93 | 0.71 | 1.8399339642383E-172 | 6.1994734991046E-168 |
| 75 | 13 | Pod | Podocyte | wk18 | PLCE1 | 51196 | 17175 | 1.05 | 0.47 | 0.08 | 7.9251377175072E-158 | 2.6702959025369E-153 |
| 75 | 13 | Pod | Podocyte | wk18 | AIF1L | 83543 | 28904 | 1.05 | 0.85 | 0.48 | 1.2687542907915E-197 | 4.274940707393E-193 |
| 75 | 13 | Pod | Podocyte | wk18 | NDRG2 | 57447 | 14460 | 1.05 | 0.58 | 0.24 | 3.4794494161618E-129 | 1.1723656862815E-124 |
| 75 | 13 | Pod | Podocyte | wk18 | DUSP1 | 1843 | 3064 | 1.03 | 0.81 | 0.54 | 4.6521152643884E-125 | 1.567483717183E-120 |
| 75 | 13 | Pod | Podocyte | wk18 | MYH9 | 4627 | 7579 | 1.03 | 0.65 | 0.28 | 6.7242606117405E-145 | 2.2656723705199E-140 |
| 75 | 13 | Pod | Podocyte | wk18 | TMSB4X | 7114 | 11881 | 1.03 | 1 | 0.99 | 2.8402494846173E-295 | 9.5699366134696E-291 |
| 75 | 13 | Pod | Podocyte | wk18 | PC | 5091 | 8636 | 1.02 | 0.46 | 0.07 | 6.7920966718077E-156 | 2.2885290525989E-151 |
| 75 | 13 | Pod | Podocyte | wk18 | P3H2 | 55214 | 19317 | 1.02 | 0.61 | 0.18 | 3.0147776901552E-159 | 1.0157991949209E-154 |
| 75 | 13 | Pod | Podocyte | wk18 | NEAT1 | 283131 | 30815 | 1 | 0.73 | 0.37 | 4.9031203833954E-141 | 1.6520573819812E-136 |
| 75 | 13 | Pod | Podocyte | wk18 | FGF1 | 2246 | 3665 | 1 | 0.36 | 0.005 | 1.3275990975777E-168 | 4.4732123993784E-164 |
| 75 | 13 | Pod | Podocyte | wk18 | NECTIN2 | 5819 | 9707 | 1 | 0.88 | 0.56 | 2.5074067480963E-197 | 8.4484562970358E-193 |
| 75 | 13 | Pod | Podocyte | wk18 | TSC22D3 | 1831 | 3051 | 1 | 0.81 | 0.46 | 1.2087446153642E-166 | 4.0727441070081E-162 |
| 75 | 13 | Pod | Podocyte | wk18 | CSRP1 | 1465 | 2469 | 0.99 | 0.57 | 0.22 | 2.6272044500706E-112 | 8.8521026740679E-108 |
| 75 | 13 | Pod | Podocyte | wk18 | VIM | 7431 | 12692 | 0.98 | 0.99 | 0.79 | 6.9057482025181E-230 | 2.3268227993565E-225 |
| 75 | 13 | Pod | Podocyte | wk18 | CD151 | 977 | 1630 | 0.98 | 0.79 | 0.47 | 2.4297333719175E-168 | 8.186743623339E-164 |
| 75 | 13 | Pod | Podocyte | wk18 | DUSP23 | 54935 | 21480 | 0.97 | 0.52 | 0.2 | 1.6855640513366E-109 | 5.6793395145735E-105 |
| 75 | 13 | Pod | Podocyte | wk18 | PLD3 | 23646 | 17158 | 0.97 | 0.78 | 0.5 | 3.775512695522E-146 | 1.2721212476292E-141 |
| 75 | 13 | Pod | Podocyte | wk18 | VEGFA | 7422 | 12680 | 0.97 | 0.51 | 0.14 | 1.0946615254692E-130 | 3.6883525439159E-126 |
| 75 | 13 | Pod | Podocyte | wk18 | COMT | 1312 | 2228 | 0.96 | 0.71 | 0.36 | 1.8889768473074E-153 | 6.3647185893177E-149 |
| 75 | 13 | Pod | Podocyte | wk18 | AXL | 558 | 905 | 0.96 | 0.42 | 0.14 | 1.3156395879389E-84 | 4.4329160276015E-80 |
| 75 | 13 | Pod | Podocyte | wk18 | PLS3 | 5358 | 9091 | 0.96 | 0.49 | 0.15 | 8.697695439249E-107 | 2.9306015013006E-102 |
| 75 | 13 | Pod | Podocyte | wk18 | ITM2B | 9445 | 6174 | 0.95 | 0.99 | 0.94 | 2.7372513899227E-219 | 9.2228948332056E-215 |
| 75 | 13 | Pod | Podocyte | wk18 | CTSD | 1509 | 2529 | 0.94 | 0.77 | 0.49 | 9.5107892738015E-154 | 3.2045653379147E-149 |
| 75 | 13 | Pod | Podocyte | wk18 | MALAT1 | 378938 | 29665 | 0.93 | 1 | 0.99 | 0 | 0 |
| 75 | 13 | Pod | Podocyte | wk18 | WT1-AS | 51352 | 18135 | 0.91 | 0.67 | 0.3 | 9.8444316013106E-135 | 3.3169827837456E-130 |
| 75 | 13 | Pod | Podocyte | wk18 | ITGA3 | 3675 | 6139 | 0.9 | 0.44 | 0.11 | 2.2979281890639E-115 | 7.742639240232E-111 |
| 75 | 13 | Pod | Podocyte | wk18 | NEBL | 10529 | 16932 | 0.9 | 0.45 | 0.09 | 1.4853301223771E-131 | 5.0046713143374E-127 |
| 75 | 13 | Pod | Podocyte | wk18 | INSIG1 | 3638 | 6083 | 0.89 | 0.5 | 0.23 | 7.1737870469849E-76 | 2.4171358076111E-71 |
| 75 | 13 | Pod | Podocyte | wk18 | SRGAP2C | 653464 | 30584 | 0.89 | 0.44 | 0.09 | 6.6527759041079E-129 | 2.2415863131301E-124 |
| 75 | 13 | Pod | Podocyte | wk18 | DACH1 | 1602 | 2663 | 0.89 | 0.67 | 0.33 | 1.4408802931046E-128 | 4.8549020595868E-124 |
| 75 | 13 | Pod | Podocyte | wk18 | SEPTIN11 | 55752 | 25589 | 0.88 | 0.85 | 0.57 | 1.3623094457874E-170 | 4.5901654466362E-166 |