Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:76
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CRABP2 | 1382 | 2339 | 1.74 | 0.93 | 0.15 | 1.0651064510458E-20 | 3.5887696761538E-16 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NNAT | 4826 | 7860 | 1.69 | 0.81 | 0.17 | 1.1211954641015E-13 | 3.7777559967435E-9 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EGR1 | 1958 | 3238 | 1.39 | 0.81 | 0.39 | 4.7137022706915E-7 | 0.01 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NCOA7 | 135112 | 21081 | 1.28 | 0.56 | 0.09 | 1.6329281896918E-11 | 5.5019882423476E-7 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HSPA1B | 3304 | 5233 | 1.09 | 1 | 0.63 | 1.5770246567147E-7 | 0.0053136268783345 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LYPD1 | 116372 | 28431 | 1.09 | 0.93 | 0.26 | 3.5158083461246E-10 | 1.1846164641432E-5 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FOSB | 2354 | 3797 | 1.02 | 0.81 | 0.29 | 1.1970715572802E-6 | 0.04 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | BAG3 | 9531 | 939 | 1 | 0.75 | 0.22 | 6.7082436502762E-9 | 0.00022602756155241 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CCND2 | 894 | 1583 | 0.94 | 0.68 | 0.17 | 4.8342754705319E-9 | 0.0001628860777041 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HSPA1A | 3303 | 5232 | 0.93 | 1 | 0.81 | 7.7354887773946E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SOX11 | 6664 | 11191 | 0.92 | 0.81 | 0.28 | 6.5025006477127E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NFKBID | 84807 | 15671 | 0.92 | 0.5 | 0.06 | 2.628760792665E-13 | 8.8573466148055E-9 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SIX1 | 6495 | 10887 | 0.85 | 0.5 | 0.12 | 1.0237252780687E-6 | 0.03 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SCG5 | 6447 | 10816 | 0.8 | 0.62 | 0.15 | 1.3326046508525E-7 | 0.0044900781105825 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SLC38A1 | 81539 | 13447 | 0.75 | 0.62 | 0.17 | 2.0245409753068E-7 | 0.0068214883621989 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HLA-DQB1 | 3119 | 4944 | 0.73 | 0.5 | 0.09 | 6.7501843708333E-8 | 0.0022744071219086 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GALNT18 | 374378 | 30488 | 0.71 | 0.43 | 0.06 | 4.6636970400704E-11 | 1.5713860806813E-6 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PPP1R15B | 84919 | 14951 | 0.7 | 0.68 | 0.17 | 5.8650699006574E-8 | 0.0019761766523275 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPL6 | 6128 | 10362 | 0.67 | 1 | 0.98 | 5.9312195329156E-8 | 0.0019984651094206 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FKBP11 | 51303 | 18624 | 0.66 | 0.43 | 0.07 | 3.2403958550214E-8 | 0.0010918189793909 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PFKFB3 | 5209 | 8874 | 0.66 | 0.37 | 0.05 | 3.0090012620666E-9 | 0.00010138528852407 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SEPHS1 | 22929 | 19685 | 0.66 | 0.62 | 0.15 | 7.8312332568114E-8 | 0.00263865573355 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RAI1 | 10743 | 9834 | 0.66 | 0.31 | 0.05 | 1.3492487773816E-6 | 0.04 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ELAVL4 | 1996 | 3315 | 0.65 | 0.31 | 0.03 | 2.309311802023E-9 | 7.7809951857364E-5 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GDNF | 2668 | 4232 | 0.64 | 0.43 | 0.03 | 3.9331694333525E-16 | 1.3252421088738E-11 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPL32 | 6161 | 10336 | 0.64 | 1 | 0.99 | 1.0952722228383E-6 | 0.03 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DCC | 1630 | 2701 | 0.62 | 0.25 | 0.02 | 1.3285178178722E-9 | 4.4763079355386E-5 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPS14 | 6208 | 10387 | 0.62 | 1 | 0.99 | 2.5380133646372E-8 | 0.00085515822308087 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ZNF768 | 79724 | 26273 | 0.61 | 0.43 | 0.07 | 5.1714188294845E-8 | 0.0017424578604065 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | TSPYL2 | 64061 | 24358 | 0.61 | 0.5 | 0.09 | 6.1187760815383E-8 | 0.0020616604129135 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000272763 | NULL | 0.59 | 0.25 | 0.02 | 1.0967786925376E-8 | 0.00036954861266362 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FZD3 | 7976 | 4041 | 0.59 | 0.56 | 0.12 | 1.0915336834844E-7 | 0.0036778135931322 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PROX1 | 5629 | 9459 | 0.59 | 0.43 | 0.04 | 4.8246710477683E-13 | 1.625624662835E-8 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ADGRG2 | 10149 | 4516 | 0.58 | 0.31 | 0.03 | 1.2277697649409E-10 | 4.1368474459918E-6 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HAS2 | 3037 | 4819 | 0.56 | 0.43 | 0.08 | 6.6561086755839E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DUSP5 | 1847 | 3071 | 0.56 | 0.31 | 0.03 | 6.9332660975514E-9 | 0.0002336094678909 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GPHA2 | 170589 | 18054 | 0.56 | 0.25 | 0.02 | 1.3481121951828E-7 | 0.0045423292304488 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CYTH1 | 9267 | 9501 | 0.5 | 0.37 | 0.06 | 2.4587164503876E-7 | 0.0082843992079359 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | REM2 | 161253 | 20248 | 0.49 | 0.25 | 0.01 | 3.0323056042332E-11 | 1.0217050502903E-6 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EFNA3 | 1944 | 3223 | 0.49 | 0.25 | 0.03 | 2.3312226243454E-7 | 0.0078548215104692 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LZTS1 | 11178 | 13861 | 0.47 | 0.25 | 0.01 | 9.0638907036691E-16 | 3.0539873336942E-11 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NKAIN3-IT1 | 643763 | 48595 | 0.47 | 0.25 | 0.02 | 5.8118445520404E-8 | 0.0019582429033645 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CCDC3 | 83643 | 23813 | 0.46 | 0.31 | 0.03 | 8.7790126163243E-9 | 0.00029580005109443 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MAPK12 | 6300 | 6874 | 0.44 | 0.18 | 0.01 | 8.5061622162971E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ELAVL2 | 1993 | 3313 | 0.43 | 0.25 | 0.02 | 3.14481206834E-9 | 0.00010596129783065 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SYNGAP1 | 8831 | 11497 | 0.42 | 0.31 | 0.02 | 7.9648164121165E-15 | 2.6836652418985E-10 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LINC00574 | 80069 | 21598 | 0.42 | 0.18 | 0.009 | 1.4045017421432E-12 | 4.7323281699773E-8 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DGCR8 | 54487 | 2847 | 0.41 | 0.31 | 0.04 | 3.2635562780536E-7 | 0.01 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | VMO1 | 284013 | 30387 | 0.41 | 0.18 | 0.003 | 2.8791173981608E-29 | 9.7008981613629E-25 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000267563 | NULL | 0.4 | 0.18 | 0.01 | 1.735107377594E-10 | 5.8462707980652E-6 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PRR19 | 284338 | 33728 | 0.4 | 0.25 | 0.01 | 4.2761250069637E-19 | 1.4407975598464E-14 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | KLF9 | 687 | 1123 | 0.4 | 0.25 | 0.02 | 2.6580113002171E-10 | 8.9559032749515E-6 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ST8SIA4 | 7903 | 10871 | 0.4 | 0.25 | 0.03 | 1.1222227306031E-6 | 0.03 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000279529 | NULL | 0.39 | 0.18 | 0.01 | 7.4012944876052E-8 | 0.0024937921646537 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SHD | 56961 | 30633 | 0.38 | 0.18 | 0.008 | 2.0868140692893E-14 | 7.0313113250633E-10 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LINC00327 | 100506697 | 42009 | 0.37 | 0.25 | 0.007 | 1.8532838107489E-26 | 6.2444544719372E-22 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | UBOX5 | 22888 | 17777 | 0.34 | 0.25 | 0.03 | 4.053068163933E-7 | 0.01 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ICAM1 | 3383 | 5344 | 0.34 | 0.18 | 0.01 | 9.1198928265618E-7 | 0.03 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | C6orf163 | 206412 | 21403 | 0.33 | 0.12 | 0.003 | 5.8182927528213E-16 | 1.9604155601356E-11 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000260971 | NULL | 0.33 | 0.12 | 0.003 | 1.9735066414566E-17 | 6.6495332777238E-13 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SMIM31 | 100505989 | 49638 | 0.33 | 0.12 | 0.004 | 1.2125459818189E-12 | 4.0855524311404E-8 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HAPLN3 | 145864 | 21446 | 0.32 | 0.18 | 0.01 | 5.0745128157645E-8 | 0.0017098063481437 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000276571 | NULL | 0.32 | 0.12 | 0.005 | 1.5428651511818E-10 | 5.198529840392E-6 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SAMD10 | 140700 | 16129 | 0.32 | 0.18 | 0.01 | 5.383372395955E-8 | 0.0018138734950931 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | IKZF2 | 22807 | 13177 | 0.32 | 0.12 | 0.006 | 1.1625834730608E-8 | 0.00039172087541309 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DGKB | 1607 | 2850 | 0.32 | 0.12 | 0.008 | 6.9018673430213E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PDZD7 | 79955 | 26257 | 0.31 | 0.18 | 0.01 | 4.1198098512363E-9 | 0.00013881287312756 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000258702 | NULL | 0.28 | 0.12 | 0.002 | 1.481233289418E-24 | 4.990867445365E-20 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LOC102723883 | 102723883 | NULL | 0.28 | 0.12 | 0.002 | 2.5426130842868E-19 | 8.567080526196E-15 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MYLK2 | 85366 | 16243 | 0.28 | 0.12 | 0.003 | 1.3646390809842E-14 | 4.5980149194681E-10 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MFSD2A | 84879 | 25897 | 0.28 | 0.12 | 0.005 | 3.5399764198966E-11 | 1.19275965492E-6 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GCGR | 2642 | 4192 | 0.27 | 0.12 | 0.006 | 1.2042314186244E-8 | 0.00040575373419132 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EGR4 | 1961 | 3241 | 0.26 | 0.12 | 0.003 | 6.3696893675372E-16 | 2.146203135498E-11 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000270074 | NULL | 0.26 | 0.18 | 0.01 | 4.3587052081708E-8 | 0.0014686221328411 | |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CPT1C | 126129 | 18540 | 0.25 | 0.12 | 0.008 | 7.4895363252688E-7 | 0.02 |
| 75 | 10 | NPCb | Nephron progenitor cells b | wk18 | TCF23 | 150921 | 18602 | 0.25 | 0.12 | 0.002 | 1.3396517806627E-21 | 4.5138227097649E-17 |