Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:76
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CRABP2 | 1382 | 2339 | 1.74 | 0.93 | 0.15 | 1.06510645104584e-20 | 3.58876967615384e-16 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NNAT | 4826 | 7860 | 1.69 | 0.81 | 0.17 | 1.12119546410148e-13 | 3.77775599674353e-09 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EGR1 | 1958 | 3238 | 1.39 | 0.81 | 0.39 | 4.71370227069148e-07 | 0.01 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NCOA7 | 135112 | 21081 | 1.28 | 0.56 | 0.09 | 1.63292818969183e-11 | 5.50198824234764e-07 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HSPA1B | 3304 | 5233 | 1.09 | 1 | 0.63 | 1.57702465671469e-07 | 0.00531362687833449 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LYPD1 | 116372 | 28431 | 1.09 | 0.93 | 0.26 | 3.51580834612457e-10 | 1.18461646414321e-05 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FOSB | 2354 | 3797 | 1.02 | 0.81 | 0.29 | 1.19707155728022e-06 | 0.04 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | BAG3 | 9531 | 939 | 1 | 0.75 | 0.22 | 6.70824365027618e-09 | 0.000226027561552405 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CCND2 | 894 | 1583 | 0.94 | 0.68 | 0.17 | 4.83427547053189e-09 | 0.000162886077704102 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HSPA1A | 3303 | 5232 | 0.93 | 1 | 0.81 | 7.73548877739464e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SOX11 | 6664 | 11191 | 0.92 | 0.81 | 0.28 | 6.50250064771272e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NFKBID | 84807 | 15671 | 0.92 | 0.5 | 0.06 | 2.62876079266503e-13 | 8.85734661480554e-09 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SIX1 | 6495 | 10887 | 0.85 | 0.5 | 0.12 | 1.02372527806867e-06 | 0.03 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SCG5 | 6447 | 10816 | 0.8 | 0.62 | 0.15 | 1.33260465085251e-07 | 0.00449007811058246 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SLC38A1 | 81539 | 13447 | 0.75 | 0.62 | 0.17 | 2.02454097530685e-07 | 0.0068214883621989 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HLA-DQB1 | 3119 | 4944 | 0.73 | 0.5 | 0.09 | 6.75018437083327e-08 | 0.00227440712190856 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GALNT18 | 374378 | 30488 | 0.71 | 0.43 | 0.06 | 4.66369704007042e-11 | 1.57138608068133e-06 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PPP1R15B | 84919 | 14951 | 0.7 | 0.68 | 0.17 | 5.86506990065739e-08 | 0.0019761766523275 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPL6 | 6128 | 10362 | 0.67 | 1 | 0.98 | 5.93121953291556e-08 | 0.00199846510942057 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FKBP11 | 51303 | 18624 | 0.66 | 0.43 | 0.07 | 3.2403958550214e-08 | 0.00109181897939091 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PFKFB3 | 5209 | 8874 | 0.66 | 0.37 | 0.05 | 3.00900126206663e-09 | 0.000101385288524073 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SEPHS1 | 22929 | 19685 | 0.66 | 0.62 | 0.15 | 7.83123325681137e-08 | 0.00263865573355002 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RAI1 | 10743 | 9834 | 0.66 | 0.31 | 0.05 | 1.34924877738161e-06 | 0.04 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ELAVL4 | 1996 | 3315 | 0.65 | 0.31 | 0.03 | 2.30931180202302e-09 | 7.78099518573636e-05 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GDNF | 2668 | 4232 | 0.64 | 0.43 | 0.03 | 3.93316943335252e-16 | 1.3252421088738e-11 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPL32 | 6161 | 10336 | 0.64 | 1 | 0.99 | 1.09527222283829e-06 | 0.03 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DCC | 1630 | 2701 | 0.62 | 0.25 | 0.02 | 1.32851781787219e-09 | 4.47630793553855e-05 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | RPS14 | 6208 | 10387 | 0.62 | 1 | 0.99 | 2.53801336463724e-08 | 0.000855158223080871 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ZNF768 | 79724 | 26273 | 0.61 | 0.43 | 0.07 | 5.17141882948446e-08 | 0.00174245786040649 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | TSPYL2 | 64061 | 24358 | 0.61 | 0.5 | 0.09 | 6.11877608153829e-08 | 0.00206166041291351 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000272763 | NULL | 0.59 | 0.25 | 0.02 | 1.09677869253762e-08 | 0.000369548612663625 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | FZD3 | 7976 | 4041 | 0.59 | 0.56 | 0.12 | 1.09153368348435e-07 | 0.00367781359313218 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PROX1 | 5629 | 9459 | 0.59 | 0.43 | 0.04 | 4.82467104776828e-13 | 1.62562466283504e-08 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ADGRG2 | 10149 | 4516 | 0.58 | 0.31 | 0.03 | 1.22776976494088e-10 | 4.13684744599179e-06 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HAS2 | 3037 | 4819 | 0.56 | 0.43 | 0.08 | 6.65610867558385e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DUSP5 | 1847 | 3071 | 0.56 | 0.31 | 0.03 | 6.93326609755138e-09 | 0.000233609467890896 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GPHA2 | 170589 | 18054 | 0.56 | 0.25 | 0.02 | 1.34811219518277e-07 | 0.00454232923044882 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CYTH1 | 9267 | 9501 | 0.5 | 0.37 | 0.06 | 2.45871645038758e-07 | 0.00828439920793591 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | REM2 | 161253 | 20248 | 0.49 | 0.25 | 0.01 | 3.03230560423323e-11 | 1.02170505029034e-06 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EFNA3 | 1944 | 3223 | 0.49 | 0.25 | 0.03 | 2.33122262434536e-07 | 0.00785482151046925 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LZTS1 | 11178 | 13861 | 0.47 | 0.25 | 0.01 | 9.06389070366906e-16 | 3.05398733369425e-11 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | NKAIN3-IT1 | 643763 | 48595 | 0.47 | 0.25 | 0.02 | 5.81184455204043e-08 | 0.0019582429033645 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CCDC3 | 83643 | 23813 | 0.46 | 0.31 | 0.03 | 8.77901261632425e-09 | 0.000295800051094429 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MAPK12 | 6300 | 6874 | 0.44 | 0.18 | 0.01 | 8.50616221629711e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ELAVL2 | 1993 | 3313 | 0.43 | 0.25 | 0.02 | 3.14481206834002e-09 | 0.000105961297830648 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SYNGAP1 | 8831 | 11497 | 0.42 | 0.31 | 0.02 | 7.96481641211648e-15 | 2.68366524189853e-10 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LINC00574 | 80069 | 21598 | 0.42 | 0.18 | 0.009 | 1.4045017421432e-12 | 4.73232816997728e-08 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DGCR8 | 54487 | 2847 | 0.41 | 0.31 | 0.04 | 3.26355627805364e-07 | 0.01 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | VMO1 | 284013 | 30387 | 0.41 | 0.18 | 0.003 | 2.87911739816078e-29 | 9.70089816136292e-25 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000267563 | NULL | 0.4 | 0.18 | 0.01 | 1.735107377594e-10 | 5.84627079806523e-06 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PRR19 | 284338 | 33728 | 0.4 | 0.25 | 0.01 | 4.27612500696371e-19 | 1.44079755984635e-14 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | KLF9 | 687 | 1123 | 0.4 | 0.25 | 0.02 | 2.65801130021711e-10 | 8.95590327495154e-06 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ST8SIA4 | 7903 | 10871 | 0.4 | 0.25 | 0.03 | 1.12222273060311e-06 | 0.03 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000279529 | NULL | 0.39 | 0.18 | 0.01 | 7.4012944876052e-08 | 0.0024937921646537 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SHD | 56961 | 30633 | 0.38 | 0.18 | 0.008 | 2.08681406928928e-14 | 7.03131132506329e-10 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LINC00327 | 100506697 | 42009 | 0.37 | 0.25 | 0.007 | 1.85328381074886e-26 | 6.24445447193721e-22 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | UBOX5 | 22888 | 17777 | 0.34 | 0.25 | 0.03 | 4.05306816393298e-07 | 0.01 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ICAM1 | 3383 | 5344 | 0.34 | 0.18 | 0.01 | 9.11989282656182e-07 | 0.03 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | C6orf163 | 206412 | 21403 | 0.33 | 0.12 | 0.003 | 5.81829275282132e-16 | 1.96041556013561e-11 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000260971 | NULL | 0.33 | 0.12 | 0.003 | 1.97350664145657e-17 | 6.64953327772377e-13 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SMIM31 | 100505989 | 49638 | 0.33 | 0.12 | 0.004 | 1.21254598181885e-12 | 4.08555243114044e-08 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | HAPLN3 | 145864 | 21446 | 0.32 | 0.18 | 0.01 | 5.0745128157645e-08 | 0.00170980634814369 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000276571 | NULL | 0.32 | 0.12 | 0.005 | 1.54286515118181e-10 | 5.198529840392e-06 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | SAMD10 | 140700 | 16129 | 0.32 | 0.18 | 0.01 | 5.38337239595505e-08 | 0.0018138734950931 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | IKZF2 | 22807 | 13177 | 0.32 | 0.12 | 0.006 | 1.16258347306077e-08 | 0.000391720875413094 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | DGKB | 1607 | 2850 | 0.32 | 0.12 | 0.008 | 6.90186734302128e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | PDZD7 | 79955 | 26257 | 0.31 | 0.18 | 0.01 | 4.1198098512363e-09 | 0.000138812873127556 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000258702 | NULL | 0.28 | 0.12 | 0.002 | 1.48123328941799e-24 | 4.99086744536498e-20 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | LOC102723883 | 102723883 | NULL | 0.28 | 0.12 | 0.002 | 2.54261308428681e-19 | 8.56708052619598e-15 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MYLK2 | 85366 | 16243 | 0.28 | 0.12 | 0.003 | 1.36463908098419e-14 | 4.59801491946813e-10 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | MFSD2A | 84879 | 25897 | 0.28 | 0.12 | 0.005 | 3.5399764198966e-11 | 1.19275965491996e-06 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | GCGR | 2642 | 4192 | 0.27 | 0.12 | 0.006 | 1.20423141862445e-08 | 0.000405753734191324 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | EGR4 | 1961 | 3241 | 0.26 | 0.12 | 0.003 | 6.36968936753721e-16 | 2.14620313549799e-11 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | ENSG00000270074 | NULL | 0.26 | 0.18 | 0.01 | 4.35870520817082e-08 | 0.00146862213284108 | |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | CPT1C | 126129 | 18540 | 0.25 | 0.12 | 0.008 | 7.48953632526879e-07 | 0.02 |
75 | 10 | NPCb | Nephron progenitor cells b | wk18 | TCF23 | 150921 | 18602 | 0.25 | 0.12 | 0.002 | 1.33965178066271e-21 | 4.51382270976495e-17 |