Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 0 | CnT | Connecting tubule | wk18 | NPM3 | 10360 | 7931 | 1.14 | 1 | 0.19 | 7.66989080687985e-09 | 0.00025842930084701 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LIMD2 | 80774 | 28142 | 1.07 | 0.85 | 0.15 | 4.25036859616743e-08 | 0.00143211919479265 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PRSS35 | 167681 | 21387 | 1.06 | 0.42 | 0.03 | 3.62686983453312e-10 | 1.22203752204759e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LYL1 | 4066 | 6734 | 0.97 | 0.57 | 0.007 | 1.96403486693216e-58 | 6.61761908064123e-54 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FGF8 | 2253 | 3686 | 0.89 | 0.42 | 0.02 | 3.76152211347394e-12 | 1.26740726091391e-07 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DHODH | 1723 | 2867 | 0.87 | 0.85 | 0.05 | 5.60408437349242e-20 | 1.88824018880453e-15 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MCM5 | 4174 | 6948 | 0.86 | 0.85 | 0.15 | 1.59364541510976e-07 | 0.00536962886167081 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CYTL1 | 54360 | 24435 | 0.8 | 0.42 | 0.04 | 2.30666858725147e-07 | 0.00777208913788509 |
| 75 | 0 | CnT | Connecting tubule | wk18 | EGFL7 | 51162 | 20594 | 0.78 | 0.71 | 0.09 | 4.38963502841586e-08 | 0.00147904362647444 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NICN1 | 84276 | 18317 | 0.77 | 0.85 | 0.04 | 3.00710844159119e-25 | 1.01321511830974e-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SCUBE3 | 222663 | 13655 | 0.76 | 0.71 | 0.07 | 7.19275808773255e-10 | 2.4235279100806e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RMI2 | 116028 | 28349 | 0.72 | 1 | 0.09 | 1.94304203472948e-15 | 6.54688583181751e-11 |
| 75 | 0 | CnT | Connecting tubule | wk18 | KLF1 | 10661 | 6345 | 0.72 | 0.28 | 0 | 7.48240936080453e-189 | 2.52112301002948e-184 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ANKRD36 | 375248 | 24079 | 0.7 | 0.57 | 0.03 | 1.02008779935774e-13 | 3.43708383115599e-09 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MTRF1L | 54516 | 21051 | 0.69 | 0.85 | 0.14 | 3.51942983984081e-07 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | IQCK | 124152 | 28556 | 0.69 | 0.85 | 0.12 | 1.46963286698324e-08 | 0.000495178098201335 |
| 75 | 0 | CnT | Connecting tubule | wk18 | YBEY | 54059 | 1299 | 0.68 | 0.85 | 0.14 | 5.51522644880413e-07 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MCM4 | 4173 | 6947 | 0.68 | 0.85 | 0.11 | 4.65373506655348e-09 | 0.000156802949332453 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC39A8 | 64116 | 20862 | 0.67 | 0.85 | 0.04 | 1.08450454847273e-22 | 3.65412962562403e-18 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UBN1 | 29855 | 12506 | 0.66 | 0.85 | 0.16 | 1.39233819478462e-06 | 0.04 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TRAF3IP3 | 80342 | 30766 | 0.66 | 0.28 | 0.003 | 9.29753868785163e-39 | 3.13271268548473e-34 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DAZAP1 | 26528 | 2683 | 0.62 | 1 | 0.15 | 9.57208089560069e-09 | 0.00032252169369637 |
| 75 | 0 | CnT | Connecting tubule | wk18 | BID | 637 | 1050 | 0.62 | 0.57 | 0.07 | 6.3121992921184e-07 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ALAD | 210 | 395 | 0.62 | 0.71 | 0.07 | 1.68186580465174e-10 | 5.66687864219358e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RNF175 | 285533 | 27735 | 0.61 | 0.57 | 0.03 | 3.2797003517004e-13 | 1.10506223650193e-08 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RDH10 | 157506 | 19975 | 0.61 | 0.71 | 0.07 | 3.21416201842947e-10 | 1.08297975048963e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UHRF1BP1L | 23074 | 29102 | 0.6 | 0.57 | 0.03 | 1.50608900659859e-13 | 5.07461629883328e-09 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CNRIP1 | 25927 | 24546 | 0.6 | 0.57 | 0.06 | 9.57062970018511e-08 | 0.00322472797118037 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DESI1 | 27351 | 24577 | 0.59 | 0.71 | 0.07 | 1.16119272394709e-09 | 3.91252276406733e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TEDC1 | 283643 | 20127 | 0.59 | 0.57 | 0.05 | 3.00743904497448e-10 | 1.0133265118137e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MYB | 4602 | 7545 | 0.59 | 0.28 | 0.01 | 5.16437747663027e-10 | 1.7400853469758e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SP110 | 3431 | 5401 | 0.59 | 0.42 | 0.02 | 1.85349419141437e-10 | 6.24516332855159e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VSTM2A | 222008 | 28499 | 0.58 | 0.28 | 0.006 | 7.92649558509571e-21 | 2.67075342244215e-16 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CELSR1 | 9620 | 1850 | 0.58 | 0.57 | 0.02 | 2.25998509515291e-18 | 7.61479377960822e-14 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ARG2 | 384 | 664 | 0.58 | 0.57 | 0.07 | 9.91028396438168e-07 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UBL4A | 8266 | 12505 | 0.58 | 1 | 0.11 | 8.29869190436857e-12 | 2.79616125025795e-07 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ICAM2 | 3384 | 5345 | 0.58 | 0.57 | 0.01 | 1.73197279795605e-36 | 5.8357091454331e-32 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HACL1 | 26061 | 17856 | 0.58 | 1 | 0.07 | 7.05298688093138e-19 | 2.37643339966102e-14 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CREB3L4 | 148327 | 18854 | 0.58 | 0.85 | 0.13 | 1.29432376348938e-07 | 0.00436109448870113 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZBTB8OS | 339487 | 24094 | 0.57 | 0.85 | 0.14 | 1.40771652550822e-06 | 0.04 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GABRB3 | 2562 | 4083 | 0.57 | 0.28 | 0.01 | 9.46428473880676e-12 | 3.18889609989355e-07 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUP88 | 4927 | 8067 | 0.57 | 0.71 | 0.1 | 5.53455921415398e-07 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GLB1L2 | 89944 | 25129 | 0.57 | 0.71 | 0.03 | 9.77231933666158e-24 | 3.29268527729475e-19 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PBX3 | 5090 | 8634 | 0.57 | 0.57 | 0.05 | 2.15356243015822e-09 | 7.2562132521751e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HSPA14 | 51182 | 29526 | 0.56 | 1 | 0.13 | 2.39101063661055e-09 | 8.0562712389956e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC5A6 | 8884 | 11041 | 0.56 | 0.85 | 0.09 | 7.50338051858385e-11 | 2.52818903193164e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VPS13A | 23230 | 1908 | 0.55 | 1 | 0.07 | 1.89560944035635e-17 | 6.38706644833668e-13 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ENSG00000282057 | NULL | 0.55 | 0.28 | 0.01 | 4.11122178528638e-08 | 0.00138523506833439 | |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM13C | 220965 | 19371 | 0.55 | 0.42 | 0.006 | 3.95863524906583e-39 | 1.33382256082024e-34 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ELOVL6 | 79071 | 15829 | 0.55 | 0.71 | 0.1 | 9.62489423324808e-07 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM107B | 83641 | 23726 | 0.54 | 0.71 | 0.09 | 4.99007167360243e-08 | 0.0016813547497036 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PARVB | 29780 | 14653 | 0.54 | 0.57 | 0.04 | 4.62423996759465e-10 | 1.55809141468134e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LAPTM5 | 7805 | 29612 | 0.54 | 0.28 | 0.01 | 6.01906415649813e-11 | 2.02806347689048e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VAT1 | 10493 | 16919 | 0.54 | 0.85 | 0.07 | 1.86295246460299e-13 | 6.27703203423332e-09 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC44A2 | 57153 | 17292 | 0.54 | 0.85 | 0.13 | 2.15046436900996e-07 | 0.00724577464494216 |
| 75 | 0 | CnT | Connecting tubule | wk18 | STAT5A | 6776 | 11366 | 0.54 | 0.28 | 0.004 | 5.68958118577776e-28 | 1.91704748473596e-23 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZNF626 | 199777 | 30461 | 0.54 | 0.71 | 0.08 | 8.04052571209286e-09 | 0.000270917473343257 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CHD1L | 9557 | 1916 | 0.53 | 0.85 | 0.14 | 6.47759340038283e-07 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GNA15 | 2769 | 4383 | 0.53 | 0.28 | 0.005 | 2.19224079584696e-24 | 7.38653613752674e-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HOMER2 | 9455 | 17513 | 0.53 | 0.71 | 0.08 | 3.01721475377975e-08 | 0.00101662033913855 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TRAPPC2 | 6399 | 23068 | 0.52 | 1 | 0.13 | 1.0326140517231e-09 | 3.47928978587583e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | EVI5 | 7813 | 3501 | 0.51 | 1 | 0.12 | 1.46755458308095e-09 | 4.94477841223294e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PRRG3 | 79057 | 30798 | 0.51 | 0.57 | 0.009 | 7.66165996643224e-49 | 2.58151970908968e-44 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM13B | 51306 | 1335 | 0.5 | 0.85 | 0.08 | 1.28620878016084e-11 | 4.33375186387395e-07 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MAATS1 | 89876 | 24010 | 0.5 | 0.57 | 0.07 | 1.02893940208855e-06 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ATAT1 | 79969 | 21186 | 0.5 | 0.85 | 0.13 | 2.92077366369598e-07 | 0.00984125478245725 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CEP63 | 80254 | 25815 | 0.5 | 0.71 | 0.09 | 1.6392017167756e-07 | 0.00552312626450371 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MID1 | 4281 | 7095 | 0.5 | 0.42 | 0.04 | 9.07500951037506e-07 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CLDN6 | 9074 | 2048 | 0.5 | 0.28 | 0.01 | 5.69166677377764e-08 | 0.00191775020275664 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DKK1 | 22943 | 2891 | 0.49 | 0.42 | 0.03 | 3.78106716613467e-09 | 0.000127399277095742 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPATCH2 | 55105 | 25499 | 0.49 | 1 | 0.17 | 4.87744455724664e-07 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NCF4 | 4689 | 7662 | 0.49 | 0.28 | 0.002 | 5.73017704561104e-55 | 1.93072585374818e-50 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DAXX | 1616 | 2681 | 0.48 | 1 | 0.17 | 6.67580995827441e-07 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUP210 | 23225 | 30052 | 0.48 | 0.57 | 0.04 | 5.19997940659287e-10 | 1.7520810612574e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ICAM4 | 3386 | 5347 | 0.48 | 0.28 | 0.002 | 8.12871831695175e-43 | 2.73889034971372e-38 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPR21 | 2844 | 4476 | 0.48 | 0.85 | 0.05 | 5.41111236722246e-17 | 1.82322020101194e-12 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PLEKHG4B | 153478 | 29399 | 0.48 | 0.42 | 0.04 | 2.962524094614e-07 | 0.00998192868439242 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZBTB11-AS1 | 100009676 | 48573 | 0.48 | 0.57 | 0.02 | 1.95004037849628e-21 | 6.57046605130536e-17 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HOXA6 | 3203 | 5107 | 0.47 | 0.57 | 0.06 | 5.40426208915138e-07 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MFSD14B | 84641 | 23376 | 0.47 | 0.85 | 0.07 | 4.01090570448803e-13 | 1.3514345680702e-08 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LOC100505501 | 100505501 | NULL | 0.47 | 0.42 | 0.03 | 1.39279817626868e-07 | 0.00469289417511969 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DIPK1B | 138311 | 28290 | 0.47 | 0.71 | 0.02 | 3.40380059706066e-25 | 1.14687657317362e-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RPL39L | 116832 | 17094 | 0.47 | 1 | 0.13 | 4.2337787992315e-09 | 0.000142652942861306 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CD34 | 947 | 1662 | 0.46 | 0.28 | 0.01 | 4.41483001000701e-08 | 0.00148753282357176 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SMPD4 | 55627 | 32949 | 0.46 | 0.85 | 0.09 | 1.79534726608059e-10 | 6.04924307833196e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TARBP1 | 6894 | 11568 | 0.45 | 0.57 | 0.03 | 6.62058609200247e-15 | 2.23074027783931e-10 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPT2 | 84706 | 18062 | 0.45 | 0.71 | 0.07 | 7.28068788774947e-09 | 0.000245315497689831 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ENSG00000261685 | NULL | 0.45 | 0.28 | 0.008 | 8.56728186618864e-15 | 2.8866599519936e-10 | |
| 75 | 0 | CnT | Connecting tubule | wk18 | CLGN | 1047 | 2060 | 0.45 | 0.57 | 0.04 | 5.90862367157342e-12 | 1.99085165989995e-07 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NOTCH1 | 4851 | 7881 | 0.45 | 0.71 | 0.09 | 1.21746431818327e-07 | 0.0041021242736867 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MIER2 | 54531 | 29210 | 0.45 | 0.85 | 0.08 | 4.30732319556245e-11 | 1.45130947751281e-06 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RTN4R | 65078 | 18601 | 0.45 | 0.28 | 0.01 | 1.14375884713739e-07 | 0.00385378105954471 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM219B | 57184 | 24695 | 0.45 | 0.85 | 0.13 | 9.16047162210517e-07 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TMC4 | 147798 | 22998 | 0.44 | 0.28 | 0.01 | 5.05284510070749e-09 | 0.000170250562823238 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PDP1 | 54704 | 9279 | 0.44 | 0.57 | 0.03 | 5.25433396981734e-13 | 1.77039528779026e-08 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TBC1D10C | 374403 | 24702 | 0.44 | 0.57 | 0.02 | 1.00924707058118e-20 | 3.40055707961624e-16 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DNAAF4 | 161582 | 21493 | 0.44 | 0.85 | 0.1 | 1.56987585590732e-09 | 5.28953970889413e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUFIP1 | 26747 | 8057 | 0.43 | 0.85 | 0.1 | 1.99833852913972e-09 | 6.73320184008336e-05 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CENPC | 1060 | 1854 | 0.43 | 0.71 | 0.09 | 1.65234166165808e-07 | 0.00556739999479074 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LINC01184 | 644873 | 49565 | 0.43 | 0.71 | 0.09 | 1.18628428802787e-07 | 0.00399706628008112 |