Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk18
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75 | 0 | CnT | Connecting tubule | wk18 | NPM3 | 10360 | 7931 | 1.14 | 1 | 0.19 | 7.6698908068798E-9 | 0.00025842930084701 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LIMD2 | 80774 | 28142 | 1.07 | 0.85 | 0.15 | 4.2503685961674E-8 | 0.0014321191947927 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PRSS35 | 167681 | 21387 | 1.06 | 0.42 | 0.03 | 3.6268698345331E-10 | 1.2220375220476E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LYL1 | 4066 | 6734 | 0.97 | 0.57 | 0.007 | 1.9640348669322E-58 | 6.6176190806412E-54 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FGF8 | 2253 | 3686 | 0.89 | 0.42 | 0.02 | 3.7615221134739E-12 | 1.2674072609139E-7 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DHODH | 1723 | 2867 | 0.87 | 0.85 | 0.05 | 5.6040843734924E-20 | 1.8882401888045E-15 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MCM5 | 4174 | 6948 | 0.86 | 0.85 | 0.15 | 1.5936454151098E-7 | 0.0053696288616708 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CYTL1 | 54360 | 24435 | 0.8 | 0.42 | 0.04 | 2.3066685872515E-7 | 0.0077720891378851 |
| 75 | 0 | CnT | Connecting tubule | wk18 | EGFL7 | 51162 | 20594 | 0.78 | 0.71 | 0.09 | 4.3896350284159E-8 | 0.0014790436264744 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NICN1 | 84276 | 18317 | 0.77 | 0.85 | 0.04 | 3.0071084415912E-25 | 1.0132151183097E-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SCUBE3 | 222663 | 13655 | 0.76 | 0.71 | 0.07 | 7.1927580877326E-10 | 2.4235279100806E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RMI2 | 116028 | 28349 | 0.72 | 1 | 0.09 | 1.9430420347295E-15 | 6.5468858318175E-11 |
| 75 | 0 | CnT | Connecting tubule | wk18 | KLF1 | 10661 | 6345 | 0.72 | 0.28 | 0 | 7.4824093608045E-189 | 2.5211230100295E-184 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ANKRD36 | 375248 | 24079 | 0.7 | 0.57 | 0.03 | 1.0200877993577E-13 | 3.437083831156E-9 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MTRF1L | 54516 | 21051 | 0.69 | 0.85 | 0.14 | 3.5194298398408E-7 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | IQCK | 124152 | 28556 | 0.69 | 0.85 | 0.12 | 1.4696328669832E-8 | 0.00049517809820133 |
| 75 | 0 | CnT | Connecting tubule | wk18 | YBEY | 54059 | 1299 | 0.68 | 0.85 | 0.14 | 5.5152264488041E-7 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MCM4 | 4173 | 6947 | 0.68 | 0.85 | 0.11 | 4.6537350665535E-9 | 0.00015680294933245 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC39A8 | 64116 | 20862 | 0.67 | 0.85 | 0.04 | 1.0845045484727E-22 | 3.654129625624E-18 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UBN1 | 29855 | 12506 | 0.66 | 0.85 | 0.16 | 1.3923381947846E-6 | 0.04 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TRAF3IP3 | 80342 | 30766 | 0.66 | 0.28 | 0.003 | 9.2975386878516E-39 | 3.1327126854847E-34 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DAZAP1 | 26528 | 2683 | 0.62 | 1 | 0.15 | 9.5720808956007E-9 | 0.00032252169369637 |
| 75 | 0 | CnT | Connecting tubule | wk18 | BID | 637 | 1050 | 0.62 | 0.57 | 0.07 | 6.3121992921184E-7 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ALAD | 210 | 395 | 0.62 | 0.71 | 0.07 | 1.6818658046517E-10 | 5.6668786421936E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RNF175 | 285533 | 27735 | 0.61 | 0.57 | 0.03 | 3.2797003517004E-13 | 1.1050622365019E-8 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RDH10 | 157506 | 19975 | 0.61 | 0.71 | 0.07 | 3.2141620184295E-10 | 1.0829797504896E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UHRF1BP1L | 23074 | 29102 | 0.6 | 0.57 | 0.03 | 1.5060890065986E-13 | 5.0746162988333E-9 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CNRIP1 | 25927 | 24546 | 0.6 | 0.57 | 0.06 | 9.5706297001851E-8 | 0.0032247279711804 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DESI1 | 27351 | 24577 | 0.59 | 0.71 | 0.07 | 1.1611927239471E-9 | 3.9125227640673E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TEDC1 | 283643 | 20127 | 0.59 | 0.57 | 0.05 | 3.0074390449745E-10 | 1.0133265118137E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MYB | 4602 | 7545 | 0.59 | 0.28 | 0.01 | 5.1643774766303E-10 | 1.7400853469758E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SP110 | 3431 | 5401 | 0.59 | 0.42 | 0.02 | 1.8534941914144E-10 | 6.2451633285516E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VSTM2A | 222008 | 28499 | 0.58 | 0.28 | 0.006 | 7.9264955850957E-21 | 2.6707534224422E-16 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CELSR1 | 9620 | 1850 | 0.58 | 0.57 | 0.02 | 2.2599850951529E-18 | 7.6147937796082E-14 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ARG2 | 384 | 664 | 0.58 | 0.57 | 0.07 | 9.9102839643817E-7 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | UBL4A | 8266 | 12505 | 0.58 | 1 | 0.11 | 8.2986919043686E-12 | 2.7961612502579E-7 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ICAM2 | 3384 | 5345 | 0.58 | 0.57 | 0.01 | 1.731972797956E-36 | 5.8357091454331E-32 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HACL1 | 26061 | 17856 | 0.58 | 1 | 0.07 | 7.0529868809314E-19 | 2.376433399661E-14 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CREB3L4 | 148327 | 18854 | 0.58 | 0.85 | 0.13 | 1.2943237634894E-7 | 0.0043610944887011 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZBTB8OS | 339487 | 24094 | 0.57 | 0.85 | 0.14 | 1.4077165255082E-6 | 0.04 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GABRB3 | 2562 | 4083 | 0.57 | 0.28 | 0.01 | 9.4642847388068E-12 | 3.1888960998935E-7 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUP88 | 4927 | 8067 | 0.57 | 0.71 | 0.1 | 5.534559214154E-7 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GLB1L2 | 89944 | 25129 | 0.57 | 0.71 | 0.03 | 9.7723193366616E-24 | 3.2926852772947E-19 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PBX3 | 5090 | 8634 | 0.57 | 0.57 | 0.05 | 2.1535624301582E-9 | 7.2562132521751E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HSPA14 | 51182 | 29526 | 0.56 | 1 | 0.13 | 2.3910106366106E-9 | 8.0562712389956E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC5A6 | 8884 | 11041 | 0.56 | 0.85 | 0.09 | 7.5033805185838E-11 | 2.5281890319316E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VPS13A | 23230 | 1908 | 0.55 | 1 | 0.07 | 1.8956094403563E-17 | 6.3870664483367E-13 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ENSG00000282057 | NULL | 0.55 | 0.28 | 0.01 | 4.1112217852864E-8 | 0.0013852350683344 | |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM13C | 220965 | 19371 | 0.55 | 0.42 | 0.006 | 3.9586352490658E-39 | 1.3338225608202E-34 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ELOVL6 | 79071 | 15829 | 0.55 | 0.71 | 0.1 | 9.6248942332481E-7 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM107B | 83641 | 23726 | 0.54 | 0.71 | 0.09 | 4.9900716736024E-8 | 0.0016813547497036 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PARVB | 29780 | 14653 | 0.54 | 0.57 | 0.04 | 4.6242399675947E-10 | 1.5580914146813E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LAPTM5 | 7805 | 29612 | 0.54 | 0.28 | 0.01 | 6.0190641564981E-11 | 2.0280634768905E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | VAT1 | 10493 | 16919 | 0.54 | 0.85 | 0.07 | 1.862952464603E-13 | 6.2770320342333E-9 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SLC44A2 | 57153 | 17292 | 0.54 | 0.85 | 0.13 | 2.15046436901E-7 | 0.0072457746449422 |
| 75 | 0 | CnT | Connecting tubule | wk18 | STAT5A | 6776 | 11366 | 0.54 | 0.28 | 0.004 | 5.6895811857778E-28 | 1.917047484736E-23 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZNF626 | 199777 | 30461 | 0.54 | 0.71 | 0.08 | 8.0405257120929E-9 | 0.00027091747334326 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CHD1L | 9557 | 1916 | 0.53 | 0.85 | 0.14 | 6.4775934003828E-7 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GNA15 | 2769 | 4383 | 0.53 | 0.28 | 0.005 | 2.192240795847E-24 | 7.3865361375267E-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HOMER2 | 9455 | 17513 | 0.53 | 0.71 | 0.08 | 3.0172147537798E-8 | 0.0010166203391385 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TRAPPC2 | 6399 | 23068 | 0.52 | 1 | 0.13 | 1.0326140517231E-9 | 3.4792897858758E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | EVI5 | 7813 | 3501 | 0.51 | 1 | 0.12 | 1.467554583081E-9 | 4.9447784122329E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PRRG3 | 79057 | 30798 | 0.51 | 0.57 | 0.009 | 7.6616599664322E-49 | 2.5815197090897E-44 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM13B | 51306 | 1335 | 0.5 | 0.85 | 0.08 | 1.2862087801608E-11 | 4.333751863874E-7 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MAATS1 | 89876 | 24010 | 0.5 | 0.57 | 0.07 | 1.0289394020886E-6 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ATAT1 | 79969 | 21186 | 0.5 | 0.85 | 0.13 | 2.920773663696E-7 | 0.0098412547824573 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CEP63 | 80254 | 25815 | 0.5 | 0.71 | 0.09 | 1.6392017167756E-7 | 0.0055231262645037 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MID1 | 4281 | 7095 | 0.5 | 0.42 | 0.04 | 9.0750095103751E-7 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CLDN6 | 9074 | 2048 | 0.5 | 0.28 | 0.01 | 5.6916667737776E-8 | 0.0019177502027566 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DKK1 | 22943 | 2891 | 0.49 | 0.42 | 0.03 | 3.7810671661347E-9 | 0.00012739927709574 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPATCH2 | 55105 | 25499 | 0.49 | 1 | 0.17 | 4.8774445572466E-7 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NCF4 | 4689 | 7662 | 0.49 | 0.28 | 0.002 | 5.730177045611E-55 | 1.9307258537482E-50 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DAXX | 1616 | 2681 | 0.48 | 1 | 0.17 | 6.6758099582744E-7 | 0.02 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUP210 | 23225 | 30052 | 0.48 | 0.57 | 0.04 | 5.1999794065929E-10 | 1.7520810612574E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ICAM4 | 3386 | 5347 | 0.48 | 0.28 | 0.002 | 8.1287183169518E-43 | 2.7388903497137E-38 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPR21 | 2844 | 4476 | 0.48 | 0.85 | 0.05 | 5.4111123672225E-17 | 1.8232202010119E-12 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PLEKHG4B | 153478 | 29399 | 0.48 | 0.42 | 0.04 | 2.962524094614E-7 | 0.0099819286843924 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ZBTB11-AS1 | 100009676 | 48573 | 0.48 | 0.57 | 0.02 | 1.9500403784963E-21 | 6.5704660513054E-17 |
| 75 | 0 | CnT | Connecting tubule | wk18 | HOXA6 | 3203 | 5107 | 0.47 | 0.57 | 0.06 | 5.4042620891514E-7 | 0.01 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MFSD14B | 84641 | 23376 | 0.47 | 0.85 | 0.07 | 4.010905704488E-13 | 1.3514345680702E-8 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LOC100505501 | 100505501 | NULL | 0.47 | 0.42 | 0.03 | 1.3927981762687E-7 | 0.0046928941751197 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DIPK1B | 138311 | 28290 | 0.47 | 0.71 | 0.02 | 3.4038005970607E-25 | 1.1468765731736E-20 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RPL39L | 116832 | 17094 | 0.47 | 1 | 0.13 | 4.2337787992315E-9 | 0.00014265294286131 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CD34 | 947 | 1662 | 0.46 | 0.28 | 0.01 | 4.414830010007E-8 | 0.0014875328235718 |
| 75 | 0 | CnT | Connecting tubule | wk18 | SMPD4 | 55627 | 32949 | 0.46 | 0.85 | 0.09 | 1.7953472660806E-10 | 6.049243078332E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TARBP1 | 6894 | 11568 | 0.45 | 0.57 | 0.03 | 6.6205860920025E-15 | 2.2307402778393E-10 |
| 75 | 0 | CnT | Connecting tubule | wk18 | GPT2 | 84706 | 18062 | 0.45 | 0.71 | 0.07 | 7.2806878877495E-9 | 0.00024531549768983 |
| 75 | 0 | CnT | Connecting tubule | wk18 | ENSG00000261685 | NULL | 0.45 | 0.28 | 0.008 | 8.5672818661886E-15 | 2.8866599519936E-10 | |
| 75 | 0 | CnT | Connecting tubule | wk18 | CLGN | 1047 | 2060 | 0.45 | 0.57 | 0.04 | 5.9086236715734E-12 | 1.9908516599E-7 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NOTCH1 | 4851 | 7881 | 0.45 | 0.71 | 0.09 | 1.2174643181833E-7 | 0.0041021242736867 |
| 75 | 0 | CnT | Connecting tubule | wk18 | MIER2 | 54531 | 29210 | 0.45 | 0.85 | 0.08 | 4.3073231955624E-11 | 1.4513094775128E-6 |
| 75 | 0 | CnT | Connecting tubule | wk18 | RTN4R | 65078 | 18601 | 0.45 | 0.28 | 0.01 | 1.1437588471374E-7 | 0.0038537810595447 |
| 75 | 0 | CnT | Connecting tubule | wk18 | FAM219B | 57184 | 24695 | 0.45 | 0.85 | 0.13 | 9.1604716221052E-7 | 0.03 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TMC4 | 147798 | 22998 | 0.44 | 0.28 | 0.01 | 5.0528451007075E-9 | 0.00017025056282324 |
| 75 | 0 | CnT | Connecting tubule | wk18 | PDP1 | 54704 | 9279 | 0.44 | 0.57 | 0.03 | 5.2543339698173E-13 | 1.7703952877903E-8 |
| 75 | 0 | CnT | Connecting tubule | wk18 | TBC1D10C | 374403 | 24702 | 0.44 | 0.57 | 0.02 | 1.0092470705812E-20 | 3.4005570796162E-16 |
| 75 | 0 | CnT | Connecting tubule | wk18 | DNAAF4 | 161582 | 21493 | 0.44 | 0.85 | 0.1 | 1.5698758559073E-9 | 5.2895397088941E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | NUFIP1 | 26747 | 8057 | 0.43 | 0.85 | 0.1 | 1.9983385291397E-9 | 6.7332018400834E-5 |
| 75 | 0 | CnT | Connecting tubule | wk18 | CENPC | 1060 | 1854 | 0.43 | 0.71 | 0.09 | 1.6523416616581E-7 | 0.0055673999947907 |
| 75 | 0 | CnT | Connecting tubule | wk18 | LINC01184 | 644873 | 49565 | 0.43 | 0.71 | 0.09 | 1.1862842880279E-7 | 0.0039970662800811 |