Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TMEM100 | 55273 | 25607 | 1.59 | 0.78 | 0.18 | 2.25100306214798e-264 | 7.58452971760139e-260 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | RSPO3 | 84870 | 20866 | 1.19 | 0.5 | 0.1 | 2.65741938779752e-169 | 8.95390888524495e-165 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NKAIN3 | 286183 | 26829 | 1.18 | 0.61 | 0.14 | 7.04994570935032e-193 | 2.3754087073085e-188 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CITED1 | 4435 | 1986 | 1.1 | 0.53 | 0.1 | 5.16926688692875e-183 | 1.74173278488177e-178 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | DAPL1 | 92196 | 21490 | 1.07 | 0.69 | 0.26 | 3.0309895581085e-124 | 1.02126162170908e-119 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NNAT | 4826 | 7860 | 1.06 | 0.73 | 0.27 | 3.90688313873316e-145 | 1.31638520476475e-140 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PRXL2A | 84293 | 28651 | 1.04 | 0.85 | 0.52 | 1.2034294089486e-133 | 4.0548350505114e-129 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MMP23B | 8510 | 7171 | 1.03 | 0.7 | 0.29 | 3.13753257255752e-123 | 1.05716022499753e-118 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | LRATD1 | 151354 | 20743 | 0.93 | 0.4 | 0.1 | 9.63825409598289e-107 | 3.24751333510047e-102 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CRABP2 | 1382 | 2339 | 0.91 | 0.71 | 0.28 | 5.56466197040295e-117 | 1.87495720430757e-112 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MEOX1 | 4222 | 7013 | 0.89 | 0.4 | 0.07 | 1.23473823371406e-145 | 4.16032700467616e-141 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SLC15A1 | 6564 | 10920 | 0.89 | 0.36 | 0.07 | 1.30729647577642e-117 | 4.40480474548108e-113 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NR2F1 | 7025 | 7975 | 0.83 | 0.84 | 0.56 | 1.09392390762056e-100 | 3.6858672143367e-96 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | BMPER | 168667 | 24154 | 0.82 | 0.35 | 0.06 | 6.1639132661149e-129 | 2.07686893588476e-124 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PHLDA1 | 22822 | 8933 | 0.81 | 0.48 | 0.25 | 4.69145822944729e-49 | 1.58073993582997e-44 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HSPA6 | 3310 | 5239 | 0.8 | 0.22 | 0.13 | 3.19138445121921e-11 | 1.0753050769938e-06 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | BST2 | 684 | 1119 | 0.79 | 0.9 | 0.45 | 8.23450162711455e-133 | 2.77453297823998e-128 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SCG5 | 6447 | 10816 | 0.78 | 0.44 | 0.17 | 2.09053662855364e-70 | 7.04385411624864e-66 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ITM2C | 81618 | 6175 | 0.76 | 0.95 | 0.82 | 3.32923681114341e-114 | 1.12175305114666e-109 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SHISA3 | 152573 | 25159 | 0.76 | 0.4 | 0.13 | 5.12556457005912e-69 | 1.72700772623572e-64 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXB-AS3 | 404266 | 40283 | 0.76 | 0.35 | 0.13 | 1.02210165139603e-50 | 3.44386930421378e-46 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HLA-DQB1 | 3119 | 4944 | 0.75 | 0.45 | 0.17 | 4.27780995837907e-65 | 1.44136528737625e-60 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NRXN1 | 9378 | 8008 | 0.73 | 0.3 | 0.05 | 4.95354956545914e-109 | 1.6690489905858e-104 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PDGFC | 56034 | 8801 | 0.73 | 0.42 | 0.17 | 1.78500496313575e-58 | 6.01439572278961e-54 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SIX1 | 6495 | 10887 | 0.72 | 0.42 | 0.14 | 7.78915244023351e-72 | 2.62447702321228e-67 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ENSG00000273015 | NULL | 0.71 | 0.44 | 0.21 | 9.0474435772402e-49 | 3.04844563891531e-44 | |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | LAMA4 | 3910 | 6484 | 0.7 | 0.41 | 0.17 | 2.51218366080888e-56 | 8.46455162672943e-52 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SEPTIN6 | 23157 | 15848 | 0.7 | 0.53 | 0.28 | 2.14273754776223e-55 | 7.21973989343006e-51 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TUBA1A | 7846 | 20766 | 0.66 | 0.96 | 0.76 | 1.63305830266128e-85 | 5.5024266449869e-81 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | UBE2E3 | 10477 | 12479 | 0.63 | 0.75 | 0.63 | 3.30800871918865e-51 | 1.11460045784342e-46 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ECEL1 | 9427 | 3147 | 0.63 | 0.27 | 0.06 | 8.07484915824366e-64 | 2.72073967537862e-59 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CHRNA1 | 1134 | 1955 | 0.62 | 0.22 | 0.01 | 8.79966104055552e-136 | 2.96495779100478e-131 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NBL1 | 4681 | 7650 | 0.61 | 0.29 | 0.12 | 1.88370315463901e-35 | 6.34694940924067e-31 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | FAT3 | 120114 | 23112 | 0.61 | 0.26 | 0.04 | 5.47998149244892e-87 | 1.84642496406574e-82 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | EYA1 | 2138 | 3519 | 0.6 | 0.28 | 0.08 | 2.7063918526938e-60 | 9.11891670846648e-56 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ELAVL4 | 1996 | 3315 | 0.6 | 0.23 | 0.04 | 7.32146680044814e-75 | 2.466895023743e-70 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | WASF3 | 10810 | 12734 | 0.59 | 0.29 | 0.12 | 5.41834686760111e-37 | 1.82565779356952e-32 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SOX4 | 6659 | 11200 | 0.57 | 0.96 | 0.91 | 3.56381253275201e-69 | 1.20079099478546e-64 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | DDIT4 | 54541 | 24944 | 0.57 | 0.58 | 0.4 | 4.52166332481656e-34 | 1.52352924066369e-29 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NLRP1 | 22861 | 14374 | 0.57 | 0.58 | 0.4 | 5.93722363045654e-37 | 2.00048813004603e-32 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ABCA5 | 23461 | 35 | 0.57 | 0.28 | 0.11 | 3.2538598652093e-39 | 1.09635554298362e-34 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TCF7L2 | 6934 | 11641 | 0.57 | 0.38 | 0.23 | 7.42713161330311e-27 | 2.50249772578635e-22 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ITGA8 | 8516 | 6144 | 0.56 | 0.32 | 0.15 | 6.71354077604054e-30 | 2.2620604290791e-25 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NR2F2 | 7026 | 7976 | 0.55 | 0.84 | 0.68 | 5.98546025911225e-52 | 2.01674097970528e-47 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SIX2 | 10736 | 10888 | 0.54 | 0.25 | 0.08 | 1.6464178395307e-43 | 5.54744026851473e-39 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXA10 | 3206 | 5100 | 0.54 | 0.68 | 0.51 | 4.42177996217564e-37 | 1.48987454045546e-32 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | AP1S2 | 8905 | 560 | 0.52 | 0.35 | 0.19 | 1.73126125787793e-26 | 5.83331168229389e-22 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CCDC80 | 151887 | 30649 | 0.51 | 0.41 | 0.28 | 7.45725376446033e-18 | 2.51264708339726e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PEG10 | 23089 | 14005 | 0.51 | 0.48 | 0.36 | 3.45006386548682e-20 | 1.16246451883713e-15 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | IGF2 | 3481 | 5466 | 0.51 | 0.85 | 0.6 | 1.48704516051597e-54 | 5.01044996384251e-50 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXB9 | 3219 | 5120 | 0.51 | 0.3 | 0.15 | 6.3649241956526e-26 | 2.14459755848319e-21 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MALAT1 | 378938 | 29665 | 0.5 | 1 | 0.99 | 2.56368057710336e-142 | 8.63806533649207e-138 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NREP | 9315 | 16834 | 0.5 | 0.75 | 0.66 | 1.63322925565257e-37 | 5.50300265399576e-33 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | COL2A1 | 1280 | 2200 | 0.49 | 0.31 | 0.16 | 1.09114658312278e-24 | 3.6765092971739e-20 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | DDAH2 | 23564 | 2716 | 0.48 | 0.73 | 0.63 | 1.47111516526356e-34 | 4.95677543783905e-30 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MEST | 4232 | 7028 | 0.48 | 0.87 | 0.75 | 3.68348212951481e-44 | 1.24111246871872e-39 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | GAS1 | 2619 | 4165 | 0.48 | 0.33 | 0.2 | 1.41911031962716e-18 | 4.78155031095177e-14 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TCF4 | 6925 | 11634 | 0.47 | 0.47 | 0.37 | 2.84706723102041e-17 | 9.59290832820016e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MARCKSL1 | 65108 | 7142 | 0.47 | 0.98 | 0.89 | 7.83613177751314e-66 | 2.64030624111528e-61 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | YBX3 | 8531 | 2428 | 0.47 | 0.76 | 0.62 | 7.93436652240318e-39 | 2.67340545605853e-34 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXB5 | 3215 | 5116 | 0.46 | 0.23 | 0.11 | 1.43857149701136e-20 | 4.84712280203006e-16 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NKAIN3-IT1 | 643763 | 48595 | 0.45 | 0.19 | 0.04 | 2.90044084997503e-52 | 9.77274539990586e-48 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | RBPJ | 3516 | 5724 | 0.45 | 0.51 | 0.43 | 5.88680833964806e-18 | 1.98350120196102e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | GFRA1 | 2674 | 4243 | 0.45 | 0.19 | 0.05 | 4.69241073332777e-36 | 1.58106087248746e-31 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | RSPO1 | 284654 | 21679 | 0.45 | 0.16 | 0.03 | 1.36429111593556e-50 | 4.59684248603327e-46 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXB2 | 3212 | 5113 | 0.44 | 0.33 | 0.22 | 1.02034125870744e-14 | 3.43793783708886e-10 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | UCHL1 | 7345 | 12513 | 0.44 | 0.36 | 0.22 | 1.55856479027119e-21 | 5.25142820433974e-17 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | H1F0 | 3005 | 4714 | 0.44 | 0.48 | 0.38 | 4.51210286604153e-16 | 1.52030793968403e-11 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | UNC5B | 219699 | 12568 | 0.44 | 0.28 | 0.15 | 1.44463188622784e-18 | 4.8675426774561e-14 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PCBP4 | 57060 | 8652 | 0.44 | 0.25 | 0.14 | 1.37701526082299e-16 | 4.63971521981698e-12 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MFAP2 | 4237 | 7033 | 0.43 | 0.48 | 0.37 | 9.33859012084064e-19 | 3.14654455531605e-14 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | UNC5B-AS1 | 728978 | 45096 | 0.43 | 0.19 | 0.06 | 1.16203835567599e-26 | 3.91537203561468e-22 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | COL9A2 | 1298 | 2218 | 0.43 | 0.23 | 0.1 | 6.47306604223892e-23 | 2.18103487227198e-18 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | RHPN1 | 114822 | 19973 | 0.43 | 0.18 | 0.06 | 5.18039715722123e-32 | 1.74548301815412e-27 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MAP2 | 4133 | 6839 | 0.43 | 0.18 | 0.04 | 2.12448717282112e-40 | 7.15824708010348e-36 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CCNI | 10983 | 1595 | 0.43 | 0.95 | 0.9 | 2.48655073661624e-54 | 8.37818405195475e-50 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ROBO2 | 6092 | 10250 | 0.43 | 0.27 | 0.13 | 7.27060071882631e-20 | 2.44975620620134e-15 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CNTFR | 1271 | 2170 | 0.43 | 0.24 | 0.11 | 1.25981779643052e-19 | 4.244830083293e-15 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NBAS | 51594 | 15625 | 0.43 | 0.24 | 0.12 | 2.20578418469627e-19 | 7.43216923191561e-15 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CDH7 | 1005 | 1766 | 0.41 | 0.24 | 0.11 | 3.31172827259802e-20 | 1.11585372416918e-15 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXC6 | 3223 | 5128 | 0.41 | 0.28 | 0.16 | 9.91003573427795e-18 | 3.33908744030761e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PCSK1N | 27344 | 17301 | 0.41 | 0.31 | 0.18 | 4.47822875743363e-18 | 1.50889439752969e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | ACSL3 | 2181 | 3570 | 0.41 | 0.29 | 0.2 | 3.77568266268587e-12 | 1.27217851636538e-07 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | SINHCAF | 58516 | 30702 | 0.41 | 0.64 | 0.52 | 8.91263533313403e-22 | 3.00302334914618e-17 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | MEIS2 | 4212 | 7001 | 0.4 | 0.59 | 0.41 | 7.93660367518592e-28 | 2.67415924231714e-23 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NUDT4 | 11163 | 8051 | 0.4 | 0.32 | 0.26 | 1.11477377403191e-07 | 0.00375611875422313 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | WSB1 | 26118 | 19221 | 0.4 | 0.76 | 0.71 | 1.59506495748263e-26 | 5.37441186774199e-22 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | PRKCB | 5579 | 9395 | 0.39 | 0.13 | 0.01 | 8.74932958449465e-61 | 2.94799911019963e-56 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | NCAM1 | 4684 | 7656 | 0.39 | 0.31 | 0.2 | 2.54537863227108e-13 | 8.57639876357417e-09 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | VGLL4 | 9686 | 28966 | 0.39 | 0.54 | 0.49 | 1.52901086620987e-13 | 5.15184921260752e-09 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXC10 | 3226 | 5122 | 0.39 | 0.23 | 0.12 | 2.17229115882918e-17 | 7.31931783055904e-13 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CADM1 | 23705 | 5951 | 0.38 | 0.59 | 0.43 | 2.37960159951288e-22 | 8.01782962939869e-18 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | LINC02253 | 107984764 | 53151 | 0.38 | 0.15 | 0.03 | 3.1088801803915e-32 | 1.04750608798111e-27 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | CAMK2N1 | 55450 | 24190 | 0.38 | 0.37 | 0.3 | 1.13891991399886e-10 | 3.83747675822775e-06 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | OSR1 | 130497 | 8111 | 0.38 | 0.15 | 0.02 | 1.88927711912066e-48 | 6.36573032516515e-44 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TXNIP | 10628 | 16952 | 0.38 | 0.54 | 0.47 | 3.1299379421069e-13 | 1.0546012902135e-08 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HOXC8 | 3224 | 5129 | 0.38 | 0.21 | 0.11 | 3.84710080173089e-14 | 1.29624214413521e-09 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | TTC28 | 23331 | 29179 | 0.38 | 0.22 | 0.12 | 1.78357395863572e-15 | 6.00957409622719e-11 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | LOC105375304 | 105375304 | NULL | 0.38 | 0.19 | 0.1 | 1.97125074425825e-11 | 6.64193225770375e-07 |
74 | 9 | NPCa | Nephron progenitor cells a | wk16 | HES6 | 55502 | 18254 | 0.38 | 0.2 | 0.13 | 2.18477204117002e-08 | 0.000736137091551828 |