Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 7 | Leu | Leukocyte | wk16 | HLA-DRA | 3122 | 4947 | 3.56 | 0.95 | 0.03 | 2.79565188653914e-276 | 9.41966946650499e-272 |
74 | 7 | Leu | Leukocyte | wk16 | CD74 | 972 | 1697 | 3.24 | 0.96 | 0.18 | 9.23306594206628e-84 | 3.11098923851981e-79 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DPA1 | 3113 | 4938 | 3.22 | 0.9 | 0.02 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DPB1 | 3115 | 4940 | 3.15 | 0.9 | 0.06 | 3.03409248156912e-168 | 1.0223071207399e-163 |
74 | 7 | Leu | Leukocyte | wk16 | CXCL8 | 3576 | 6025 | 2.95 | 0.7 | 0.01 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | SRGN | 5552 | 9361 | 2.92 | 0.95 | 0.007 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CCL3 | 6348 | 10627 | 2.88 | 0.56 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CCL4 | 6351 | 10630 | 2.81 | 0.43 | 0.005 | 5.49176042639448e-295 | 1.85039375806936e-290 |
74 | 7 | Leu | Leukocyte | wk16 | CST3 | 1471 | 2475 | 2.76 | 0.93 | 0.61 | 3.00202937386455e-36 | 1.01150377722992e-31 |
74 | 7 | Leu | Leukocyte | wk16 | TYROBP | 7305 | 12449 | 2.56 | 0.86 | 0.003 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DRB1 | 3123 | 4948 | 2.34 | 0.84 | 0.06 | 8.52187226528589e-144 | 2.87135964106543e-139 |
74 | 7 | Leu | Leukocyte | wk16 | S100A4 | 6275 | 10494 | 2.31 | 0.8 | 0.09 | 2.33577690276204e-90 | 7.87016669616643e-86 |
74 | 7 | Leu | Leukocyte | wk16 | LYZ | 4069 | 6740 | 2.22 | 0.53 | 0.003 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | LST1 | 7940 | 14189 | 2.15 | 0.92 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CCL3L3 | 414062 | 30554 | 2.12 | 0.32 | 0.003 | 1.87137164892382e-229 | 6.30539963388391e-225 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DRB5 | 3127 | 4953 | 2.07 | 0.84 | 0.04 | 4.12854012650202e-193 | 1.39107031022359e-188 |
74 | 7 | Leu | Leukocyte | wk16 | AIF1 | 199 | 352 | 2.05 | 0.98 | 0.11 | 4.66964233847338e-113 | 1.57338928952522e-108 |
74 | 7 | Leu | Leukocyte | wk16 | CCL4L2 | 9560 | 24066 | 2.04 | 0.32 | 0.005 | 1.56108996038363e-184 | 5.25993651251659e-180 |
74 | 7 | Leu | Leukocyte | wk16 | SOD2 | 6648 | 11180 | 2.02 | 0.89 | 0.18 | 2.23748816124629e-62 | 7.53899261050324e-58 |
74 | 7 | Leu | Leukocyte | wk16 | SAT1 | 6303 | 10540 | 2 | 0.95 | 0.54 | 1.18250242030131e-30 | 3.98432365496324e-26 |
74 | 7 | Leu | Leukocyte | wk16 | FCER1G | 2207 | 3611 | 1.98 | 0.86 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | FTL | 2512 | 3999 | 1.93 | 1 | 0.97 | 8.59718730406551e-34 | 2.89673629023183e-29 |
74 | 7 | Leu | Leukocyte | wk16 | ANXA1 | 301 | 533 | 1.91 | 0.8 | 0.03 | 2.51420512606679e-201 | 8.47136275176945e-197 |
74 | 7 | Leu | Leukocyte | wk16 | CORO1A | 11151 | 2252 | 1.89 | 0.9 | 0.02 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | GPR183 | 1880 | 3128 | 1.84 | 0.7 | 0.004 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CD83 | 9308 | 1703 | 1.8 | 0.8 | 0.07 | 1.86931472146359e-108 | 6.29846902249942e-104 |
74 | 7 | Leu | Leukocyte | wk16 | S100A9 | 6280 | 10499 | 1.77 | 0.18 | 0.004 | 4.16434121129326e-80 | 1.40313312773315e-75 |
74 | 7 | Leu | Leukocyte | wk16 | C1QA | 712 | 1241 | 1.67 | 0.27 | 0.002 | 7.32624480433012e-229 | 2.46850492437099e-224 |
74 | 7 | Leu | Leukocyte | wk16 | IL1B | 3553 | 5992 | 1.67 | 0.46 | 0.003 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-B | 3106 | 4932 | 1.65 | 0.89 | 0.14 | 1.66227665904193e-74 | 5.60087497497587e-70 |
74 | 7 | Leu | Leukocyte | wk16 | ARHGDIB | 397 | 679 | 1.64 | 0.84 | 0.06 | 4.57630322592637e-135 | 1.54193960894363e-130 |
74 | 7 | Leu | Leukocyte | wk16 | ARPC1B | 10095 | 704 | 1.63 | 0.89 | 0.15 | 4.7579556435903e-73 | 1.60314557455132e-68 |
74 | 7 | Leu | Leukocyte | wk16 | CYBA | 1535 | 2577 | 1.63 | 1 | 0.44 | 8.59223976353914e-45 | 2.89506926592688e-40 |
74 | 7 | Leu | Leukocyte | wk16 | FTH1 | 2495 | 3976 | 1.63 | 1 | 0.99 | 1.28346250027697e-34 | 4.32449854843321e-30 |
74 | 7 | Leu | Leukocyte | wk16 | CD44 | 960 | 1681 | 1.57 | 0.73 | 0.01 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | NEAT1 | 283131 | 30815 | 1.54 | 0.95 | 0.47 | 6.78178018674666e-33 | 2.28505301612242e-28 |
74 | 7 | Leu | Leukocyte | wk16 | B2M | 567 | 914 | 1.51 | 1 | 0.82 | 2.51964769847029e-37 | 8.4897009552258e-33 |
74 | 7 | Leu | Leukocyte | wk16 | PLAUR | 5329 | 9053 | 1.5 | 0.56 | 0.02 | 6.09835500142878e-130 | 2.05477973418141e-125 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DMA | 3108 | 4934 | 1.49 | 0.7 | 0.04 | 6.90785409669603e-148 | 2.32753235934076e-143 |
74 | 7 | Leu | Leukocyte | wk16 | GPX1 | 2876 | 4553 | 1.47 | 0.95 | 0.55 | 5.26625969147354e-35 | 1.77441354044509e-30 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DQA1 | 3117 | 4942 | 1.46 | 0.6 | 0.003 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | LAPTM5 | 7805 | 29612 | 1.46 | 0.7 | 0.007 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | PLAC8 | 51316 | 19254 | 1.44 | 0.55 | 0.005 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | PLEK | 5341 | 9070 | 1.44 | 0.67 | 0.001 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | COTL1 | 23406 | 18304 | 1.42 | 0.83 | 0.37 | 5.22782769123423e-28 | 1.76146426228446e-23 |
74 | 7 | Leu | Leukocyte | wk16 | RILPL2 | 196383 | 28787 | 1.4 | 0.8 | 0.1 | 8.17020344847423e-79 | 2.75286834992891e-74 |
74 | 7 | Leu | Leukocyte | wk16 | ALOX5AP | 241 | 436 | 1.39 | 0.63 | 0.007 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | LSP1 | 4046 | 6707 | 1.37 | 0.6 | 0.01 | 2.72957061744095e-281 | 9.19701523840555e-277 |
74 | 7 | Leu | Leukocyte | wk16 | RNASE6 | 6039 | 10048 | 1.37 | 0.7 | 0.002 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | SH3BGRL3 | 83442 | 15568 | 1.35 | 0.93 | 0.47 | 8.92907083200464e-31 | 3.00856112613564e-26 |
74 | 7 | Leu | Leukocyte | wk16 | CD37 | 951 | 1666 | 1.34 | 0.66 | 0.005 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | S100A8 | 6279 | 10498 | 1.32 | 0.12 | 0 | 1.74581054738852e-141 | 5.88233405837089e-137 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DQB1 | 3119 | 4944 | 1.31 | 0.7 | 0.19 | 8.99198742644386e-30 | 3.02976024346599e-25 |
74 | 7 | Leu | Leukocyte | wk16 | HCST | 10870 | 16977 | 1.31 | 0.72 | 0.005 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CLEC10A | 10462 | 16916 | 1.31 | 0.41 | 0 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | RGCC | 28984 | 20369 | 1.27 | 0.6 | 0.08 | 5.79909488375365e-52 | 1.95394703013195e-47 |
74 | 7 | Leu | Leukocyte | wk16 | TYMP | 1890 | 3148 | 1.25 | 0.72 | 0.04 | 1.02800855195147e-151 | 3.46377201494527e-147 |
74 | 7 | Leu | Leukocyte | wk16 | EMP3 | 2014 | 3335 | 1.23 | 0.84 | 0.23 | 2.32950716925221e-37 | 7.8490414560784e-33 |
74 | 7 | Leu | Leukocyte | wk16 | LTB | 4050 | 6711 | 1.23 | 0.16 | 0.008 | 2.33404755667042e-41 | 7.86433983744532e-37 |
74 | 7 | Leu | Leukocyte | wk16 | MS4A6A | 64231 | 13375 | 1.2 | 0.41 | 0.002 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | FXYD5 | 53827 | 4029 | 1.19 | 0.75 | 0.06 | 6.5509967685368e-103 | 2.20729285119079e-98 |
74 | 7 | Leu | Leukocyte | wk16 | CD68 | 968 | 1693 | 1.17 | 0.55 | 0.01 | 1.73186759971485e-172 | 5.83535469047922e-168 |
74 | 7 | Leu | Leukocyte | wk16 | CXCL2 | 2920 | 4603 | 1.16 | 0.29 | 0.03 | 4.7870371726731e-28 | 1.61294430496047e-23 |
74 | 7 | Leu | Leukocyte | wk16 | PYCARD | 29108 | 16608 | 1.15 | 0.69 | 0.08 | 3.40386463300728e-67 | 1.14689814944547e-62 |
74 | 7 | Leu | Leukocyte | wk16 | HLA-DQA2 | 3118 | 4943 | 1.15 | 0.55 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | RNASET2 | 8635 | 21686 | 1.14 | 0.75 | 0.18 | 1.85008102520407e-40 | 6.23366300632259e-36 |
74 | 7 | Leu | Leukocyte | wk16 | CXCL3 | 2921 | 4604 | 1.14 | 0.27 | 0.04 | 5.94059233162305e-19 | 2.00162318021707e-14 |
74 | 7 | Leu | Leukocyte | wk16 | CD48 | 962 | 1683 | 1.14 | 0.56 | 0.001 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | REL | 5966 | 9954 | 1.12 | 0.75 | 0.22 | 1.42880639584957e-29 | 4.81422027017555e-25 |
74 | 7 | Leu | Leukocyte | wk16 | RETN | 56729 | 20389 | 1.12 | 0.44 | 0.001 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | NAMPT | 10135 | 30092 | 1.11 | 0.7 | 0.15 | 1.31925089791475e-42 | 4.44508397543396e-38 |
74 | 7 | Leu | Leukocyte | wk16 | C1QC | 714 | 1245 | 1.11 | 0.23 | 0.001 | 2.2486838372777e-235 | 7.57671532132348e-231 |
74 | 7 | Leu | Leukocyte | wk16 | CTSS | 1520 | 2545 | 1.11 | 0.63 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | PTPRE | 5791 | 9669 | 1.09 | 0.64 | 0.01 | 1.72809563939576e-229 | 5.82264544738006e-225 |
74 | 7 | Leu | Leukocyte | wk16 | NINJ1 | 4814 | 7824 | 1.07 | 0.66 | 0.18 | 8.07912572142519e-27 | 2.722180620577e-22 |
74 | 7 | Leu | Leukocyte | wk16 | CREM | 1390 | 2352 | 1.06 | 0.58 | 0.24 | 6.035146153956e-14 | 2.03348214511394e-09 |
74 | 7 | Leu | Leukocyte | wk16 | GPSM3 | 63940 | 13945 | 1.05 | 0.69 | 0.03 | 7.98628126836261e-181 | 2.6908976105621e-176 |
74 | 7 | Leu | Leukocyte | wk16 | TSPO | 706 | 1158 | 1.04 | 0.64 | 0.22 | 2.0015349890608e-20 | 6.74397199214146e-16 |
74 | 7 | Leu | Leukocyte | wk16 | GMFG | 9535 | 4374 | 1.03 | 0.61 | 0.03 | 1.96313804006153e-136 | 6.61459731218333e-132 |
74 | 7 | Leu | Leukocyte | wk16 | BID | 637 | 1050 | 1.03 | 0.64 | 0.12 | 2.88391341628579e-40 | 9.71705786483334e-36 |
74 | 7 | Leu | Leukocyte | wk16 | BCL2A1 | 597 | 991 | 1.02 | 0.3 | 0.001 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | IL1RN | 3557 | 6000 | 1.02 | 0.33 | 0.004 | 6.17511196814203e-225 | 2.08064222654578e-220 |
74 | 7 | Leu | Leukocyte | wk16 | ANKRD28 | 23243 | 29024 | 1.02 | 0.52 | 0.08 | 1.10159396110351e-36 | 3.71171069254218e-32 |
74 | 7 | Leu | Leukocyte | wk16 | ITGB2 | 3689 | 6155 | 1.01 | 0.53 | 0.003 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | CD1C | 911 | 1636 | 1.01 | 0.36 | 0 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | LY86 | 9450 | 16837 | 1.01 | 0.55 | 0.001 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | C15orf48 | 84419 | 29898 | 1.01 | 0.38 | 0.007 | 2.92999796284649e-193 | 9.87233513601497e-189 |
74 | 7 | Leu | Leukocyte | wk16 | STX11 | 8676 | 11429 | 1 | 0.52 | 0.006 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | NPC2 | 10577 | 14537 | 1 | 0.9 | 0.6 | 1.56027385004503e-14 | 5.25718671034172e-10 |
74 | 7 | Leu | Leukocyte | wk16 | NFKBIA | 4792 | 7797 | 1 | 0.86 | 0.51 | 6.72633528328335e-13 | 2.26637141034949e-08 |
74 | 7 | Leu | Leukocyte | wk16 | NR4A2 | 4929 | 7981 | 0.99 | 0.43 | 0.03 | 8.71944139908664e-63 | 2.93792858500825e-58 |
74 | 7 | Leu | Leukocyte | wk16 | C1orf162 | 128346 | 28344 | 0.98 | 0.5 | 0.004 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | RGS10 | 6001 | 9992 | 0.98 | 0.7 | 0.15 | 3.59890710002886e-36 | 1.21261575828372e-31 |
74 | 7 | Leu | Leukocyte | wk16 | G0S2 | 50486 | 30229 | 0.97 | 0.26 | 0.06 | 2.97430640880853e-10 | 1.00216280138395e-05 |
74 | 7 | Leu | Leukocyte | wk16 | RGS1 | 5996 | 9991 | 0.97 | 0.47 | 0.002 | 0 | 0 |
74 | 7 | Leu | Leukocyte | wk16 | FOLR2 | 2350 | 3793 | 0.96 | 0.23 | 0.002 | 6.06182678233986e-176 | 2.04247191604159e-171 |
74 | 7 | Leu | Leukocyte | wk16 | LIMD2 | 80774 | 28142 | 0.95 | 0.66 | 0.18 | 4.18519281823736e-28 | 1.4101588681769e-23 |
74 | 7 | Leu | Leukocyte | wk16 | TNFAIP3 | 7128 | 11896 | 0.94 | 0.36 | 0.03 | 2.15837974221321e-47 | 7.2724447034132e-43 |
74 | 7 | Leu | Leukocyte | wk16 | OAZ1 | 4946 | 8095 | 0.94 | 1 | 0.81 | 7.43028380250717e-29 | 2.50355982441677e-24 |
74 | 7 | Leu | Leukocyte | wk16 | CD53 | 963 | 1686 | 0.92 | 0.56 | 0.002 | 0 | 0 |