Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PTN | 5764 | 9630 | 1.49 | 0.93 | 0.42 | 3.5337176035674E-77 | 1.190650809346E-72 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2C | 11065 | 15937 | 1.44 | 0.74 | 0.14 | 1.0509952376927E-113 | 3.5412233538819E-109 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCLAF | 9768 | 28961 | 1.43 | 0.91 | 0.26 | 2.0626450102194E-104 | 6.9498760974331E-100 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TOP2A | 7153 | 11989 | 1.38 | 0.65 | 0.11 | 2.4172811628764E-106 | 8.1447871501958E-102 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | LGALS1 | 3956 | 6561 | 1.37 | 0.97 | 0.39 | 5.5731482658022E-76 | 1.8778165766794E-71 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGB2 | 3148 | 5000 | 1.31 | 0.96 | 0.52 | 8.3253920820344E-72 | 2.8051576081207E-67 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TYMS | 7298 | 12441 | 1.28 | 0.76 | 0.23 | 9.9976287110376E-78 | 3.368601017897E-73 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBA1B | 10376 | 18809 | 1.27 | 1 | 0.78 | 1.1188367981325E-80 | 3.7698087076275E-76 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | HIST1H4C | 8364 | 4787 | 1.25 | 0.69 | 0.36 | 6.371896034213E-34 | 2.1469466497677E-29 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPF | 1063 | 1857 | 1.21 | 0.69 | 0.13 | 1.0512680271039E-97 | 3.5421424905238E-93 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | MKI67 | 4288 | 7107 | 1.14 | 0.58 | 0.09 | 4.1500108683233E-103 | 1.3983046619728E-98 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | SMC4 | 10051 | 14013 | 1.12 | 0.81 | 0.26 | 2.2009403952306E-75 | 7.4158485676899E-71 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUSAP1 | 51203 | 18538 | 1.1 | 0.64 | 0.14 | 5.3061972436834E-78 | 1.7878700992867E-73 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PTTG1 | 9232 | 9690 | 1.09 | 0.7 | 0.26 | 8.645428465234E-48 | 2.912990667076E-43 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | BIRC5 | 332 | 593 | 1.06 | 0.61 | 0.12 | 1.7225868920662E-81 | 5.8040842741279E-77 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDK1 | 983 | 1722 | 1.06 | 0.6 | 0.1 | 3.7552863864622E-103 | 1.2653061950546E-98 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL3A1 | 1281 | 2201 | 1.05 | 0.85 | 0.25 | 6.1266862016301E-75 | 2.0643256487773E-70 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL1A2 | 1278 | 2198 | 1.01 | 0.83 | 0.23 | 8.8262981290794E-74 | 2.973932891612E-69 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCOLCE | 5118 | 8738 | 1 | 0.84 | 0.2 | 1.1261788638535E-88 | 3.794547063868E-84 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFX | 3014 | 4739 | 0.97 | 0.67 | 0.26 | 9.4631293556476E-47 | 3.1885068050919E-42 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL1A1 | 1277 | 2197 | 0.96 | 0.84 | 0.26 | 4.1702814409476E-66 | 1.4051346287129E-61 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | RARRES2 | 5919 | 9868 | 0.95 | 0.67 | 0.18 | 3.1003706601083E-64 | 1.0446388902169E-59 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TK1 | 7083 | 11830 | 0.94 | 0.65 | 0.13 | 8.8225808570856E-90 | 2.9726803939864E-85 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CYP1B1 | 1545 | 2597 | 0.94 | 0.77 | 0.18 | 2.1253095942124E-84 | 7.1610181467393E-80 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFZ | 3015 | 4741 | 0.94 | 0.99 | 0.81 | 4.3854515088347E-62 | 1.4776340313868E-57 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | MAD2L1 | 4085 | 6763 | 0.94 | 0.71 | 0.2 | 7.2533036234471E-66 | 2.4439281228843E-61 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2T | 29089 | 25009 | 0.93 | 0.65 | 0.16 | 3.1522829919454E-72 | 1.0621302313061E-67 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | EMILIN1 | 11117 | 19880 | 0.93 | 0.72 | 0.14 | 2.1731423329619E-96 | 7.3221857766817E-92 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CKS1B | 1163 | 19083 | 0.91 | 0.8 | 0.34 | 6.739462766661E-50 | 2.2707945845987E-45 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | ZWINT | 11130 | 13195 | 0.91 | 0.61 | 0.16 | 2.205033066545E-63 | 7.4296384144168E-59 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBB6 | 84617 | 20776 | 0.9 | 0.62 | 0.11 | 6.7471054088105E-94 | 2.2733696964446E-89 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBB | 203068 | 20778 | 0.9 | 0.98 | 0.88 | 3.1390050006445E-60 | 1.0576563449172E-55 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | AURKB | 9212 | 11390 | 0.9 | 0.55 | 0.09 | 3.3037746898956E-95 | 1.1131738440134E-90 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | MXD3 | 83463 | 14008 | 0.87 | 0.41 | 0.05 | 1.251793967985E-82 | 4.2177945957286E-78 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TPM2 | 7169 | 12011 | 0.86 | 0.83 | 0.27 | 1.5480704794825E-63 | 5.2160686735685E-59 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | RRM2 | 6241 | 10452 | 0.86 | 0.43 | 0.07 | 2.1675681210589E-67 | 7.3034040270958E-63 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | ARL6IP1 | 23204 | 697 | 0.84 | 0.72 | 0.55 | 1.0231276306777E-14 | 3.4473262388054E-10 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | GTSE1 | 51512 | 13698 | 0.81 | 0.48 | 0.08 | 3.0704497861681E-77 | 1.0345573509515E-72 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPK | 64105 | 29479 | 0.81 | 0.53 | 0.11 | 6.1991550386491E-65 | 2.0887432987224E-60 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | SMC2 | 10592 | 14011 | 0.8 | 0.65 | 0.2 | 3.1639577381275E-51 | 1.0660639202847E-46 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | DUT | 1854 | 3078 | 0.8 | 0.79 | 0.58 | 2.3710543608871E-23 | 7.989030563573E-19 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2S | 27338 | 17895 | 0.79 | 0.75 | 0.42 | 8.941659606195E-29 | 3.0128027877114E-24 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGN2 | 3151 | 4986 | 0.79 | 0.99 | 0.9 | 1.5139815826022E-57 | 5.1012095444197E-53 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | OLFML3 | 56944 | 24956 | 0.78 | 0.74 | 0.18 | 5.3136321012216E-70 | 1.7903752001856E-65 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TMSB15A | 11013 | 30744 | 0.78 | 0.74 | 0.3 | 1.3932120873478E-41 | 4.6942888071098E-37 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | FBLN1 | 2192 | 3600 | 0.78 | 0.75 | 0.34 | 5.3030958615227E-41 | 1.7868251195815E-36 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CALD1 | 800 | 1441 | 0.77 | 0.94 | 0.59 | 8.387105908196E-45 | 2.8259514647076E-40 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PRC1 | 9055 | 9341 | 0.77 | 0.49 | 0.1 | 4.5236565469478E-61 | 1.5242008369286E-56 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TNC | 3371 | 5318 | 0.75 | 0.59 | 0.15 | 2.402667738001E-53 | 8.0955486764205E-49 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDKN3 | 1033 | 1791 | 0.75 | 0.39 | 0.08 | 2.3162955835754E-45 | 7.8045263392989E-41 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | ASPM | 259266 | 19048 | 0.74 | 0.33 | 0.05 | 1.6147287707571E-52 | 5.4406671201891E-48 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF20B | 9585 | 7212 | 0.73 | 0.47 | 0.13 | 3.7567602843837E-42 | 1.2658028102202E-37 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUF2 | 83540 | 14621 | 0.73 | 0.43 | 0.07 | 2.4977223130048E-66 | 8.4158255614383E-62 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | FST | 10468 | 3971 | 0.73 | 0.41 | 0.1 | 1.6944563934002E-37 | 5.7093013719227E-33 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDC20 | 991 | 1723 | 0.73 | 0.33 | 0.07 | 4.083611444445E-37 | 1.3759320400913E-32 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPU | 79682 | 21348 | 0.72 | 0.52 | 0.13 | 4.74882507607E-50 | 1.600069121131E-45 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | KPNA2 | 3838 | 6395 | 0.72 | 0.53 | 0.26 | 8.5824928706822E-20 | 2.8917851478477E-15 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CTSC | 1075 | 2528 | 0.71 | 0.82 | 0.32 | 1.337233418119E-47 | 4.5056742790101E-43 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TPX2 | 22974 | 1249 | 0.71 | 0.38 | 0.07 | 1.2741725483355E-49 | 4.2931969843616E-45 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | EPB41L2 | 2037 | 3379 | 0.7 | 0.52 | 0.16 | 3.4708266383408E-38 | 1.1694603275226E-33 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCNB1 | 891 | 1579 | 0.7 | 0.37 | 0.11 | 4.9317169984083E-29 | 1.6616927254437E-24 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPW | 387103 | 21488 | 0.7 | 0.63 | 0.23 | 1.406396433139E-37 | 4.7387121418186E-33 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFV | 94239 | 20664 | 0.7 | 0.82 | 0.49 | 1.1599749995445E-34 | 3.9084197634652E-30 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF20A | 10112 | 9787 | 0.69 | 0.32 | 0.03 | 5.6532979291631E-73 | 1.9048222042522E-68 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PIMREG | 54478 | 25483 | 0.69 | 0.39 | 0.08 | 1.6990202709854E-47 | 5.7246789010584E-43 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | MYH10 | 4628 | 7568 | 0.69 | 0.74 | 0.36 | 9.92890006701E-34 | 3.3454435885783E-29 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | SPC25 | 57405 | 24031 | 0.69 | 0.38 | 0.06 | 1.944055703075E-62 | 6.5503012859408E-58 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TMEM106C | 79022 | 28775 | 0.69 | 0.58 | 0.24 | 1.1929956905478E-30 | 4.0196796797319E-26 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCNA | 5111 | 8729 | 0.68 | 0.66 | 0.32 | 3.5737050382532E-27 | 1.204124175589E-22 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF22 | 3835 | 6391 | 0.68 | 0.48 | 0.17 | 2.8297459542784E-30 | 9.5345460183456E-26 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CLSPN | 63967 | 19715 | 0.67 | 0.45 | 0.11 | 2.0769117405531E-45 | 6.9979464186197E-41 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | MIS18BP1 | 55320 | 20190 | 0.67 | 0.4 | 0.11 | 1.1143056035116E-32 | 3.7545413004721E-28 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCN1 | 3491 | 2654 | 0.67 | 0.84 | 0.55 | 2.3587838714779E-22 | 7.9476863765575E-18 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBA1C | 84790 | 20768 | 0.67 | 0.47 | 0.2 | 7.3519143435272E-21 | 2.477154018908E-16 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPA | 1058 | 1851 | 0.67 | 0.27 | 0.05 | 6.2003496017604E-39 | 2.0891457948171E-34 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPE | 1062 | 1856 | 0.66 | 0.32 | 0.04 | 1.3693503795665E-64 | 4.6138891689115E-60 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PBK | 55872 | 18282 | 0.66 | 0.41 | 0.09 | 2.4131512473535E-47 | 8.130871812833E-43 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | FBLN5 | 10516 | 3602 | 0.66 | 0.49 | 0.12 | 3.2585122239179E-42 | 1.0979231087269E-37 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCNB2 | 9133 | 1580 | 0.66 | 0.41 | 0.11 | 1.2293167284757E-33 | 4.142059784926E-29 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CKS2 | 1164 | 2000 | 0.66 | 0.59 | 0.38 | 1.1579015084153E-14 | 3.9014333424546E-10 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | SGO2 | 151246 | 30812 | 0.65 | 0.33 | 0.06 | 6.3298778838479E-44 | 2.1327890541837E-39 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | C21orf58 | 54058 | 1300 | 0.65 | 0.46 | 0.11 | 6.5098319828084E-46 | 2.1934227882875E-41 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | LMNB1 | 4001 | 6637 | 0.64 | 0.46 | 0.14 | 9.7600694531017E-33 | 3.2885578015281E-28 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL6A3 | 1293 | 2213 | 0.64 | 0.62 | 0.19 | 6.671063301749E-43 | 2.2477480688913E-38 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | SULT1E1 | 6783 | 11377 | 0.63 | 0.71 | 0.23 | 2.1776289808404E-42 | 7.3373030880436E-38 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGB1 | 3146 | 4983 | 0.63 | 1 | 0.96 | 1.9127793891154E-48 | 6.4449188736853E-44 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL21A1 | 81578 | 17025 | 0.62 | 0.54 | 0.12 | 3.3506056610969E-56 | 1.12895307145E-51 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDKN2C | 1031 | 1789 | 0.62 | 0.26 | 0.01 | 5.0689853703851E-135 | 1.7079439306976E-130 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | GGH | 8836 | 4248 | 0.62 | 0.59 | 0.24 | 5.1803531952637E-30 | 1.7454682056122E-25 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDCA4 | 55038 | 14625 | 0.62 | 0.45 | 0.13 | 8.1483796303124E-36 | 2.7455150326375E-31 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | B2M | 567 | 914 | 0.61 | 0.99 | 0.82 | 3.1969056138538E-40 | 1.0771653775319E-35 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUCKS1 | 64710 | 29923 | 0.61 | 0.97 | 0.84 | 1.1225321781305E-33 | 3.7822599209928E-29 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | USP1 | 7398 | 12607 | 0.61 | 0.55 | 0.24 | 1.2008099067694E-25 | 4.0460088998687E-21 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PSRC1 | 84722 | 24472 | 0.6 | 0.32 | 0.06 | 1.7554897906991E-38 | 5.9149473007816E-34 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | PDGFRA | 5156 | 8803 | 0.6 | 0.55 | 0.13 | 1.3805451970004E-52 | 4.651608986773E-48 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | ITM2A | 9452 | 6173 | 0.6 | 0.53 | 0.13 | 2.5844158732529E-49 | 8.7079308433384E-45 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF23 | 9493 | 6392 | 0.6 | 0.34 | 0.05 | 4.8635077405678E-60 | 1.6387102981069E-55 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | EMCN | 51705 | 16041 | 0.59 | 0.59 | 0.15 | 3.4796131385089E-51 | 1.1724208508892E-46 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCDC34 | 91057 | 25079 | 0.59 | 0.59 | 0.26 | 1.0461851733778E-25 | 3.5250163231791E-21 |
| 74 | 6 | IPC | Interstitial progenitor cell | wk16 | RAD51AP1 | 10635 | 16956 | 0.59 | 0.42 | 0.1 | 5.171426170106E-45 | 1.7424603337555E-40 |