Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PTN | 5764 | 9630 | 1.49 | 0.93 | 0.42 | 3.53371760356739e-77 | 1.190650809346e-72 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2C | 11065 | 15937 | 1.44 | 0.74 | 0.14 | 1.05099523769273e-113 | 3.54122335388187e-109 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCLAF | 9768 | 28961 | 1.43 | 0.91 | 0.26 | 2.06264501021935e-104 | 6.94987609743306e-100 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TOP2A | 7153 | 11989 | 1.38 | 0.65 | 0.11 | 2.41728116287642e-106 | 8.14478715019581e-102 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | LGALS1 | 3956 | 6561 | 1.37 | 0.97 | 0.39 | 5.57314826580219e-76 | 1.87781657667939e-71 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGB2 | 3148 | 5000 | 1.31 | 0.96 | 0.52 | 8.32539208203445e-72 | 2.80515760812069e-67 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TYMS | 7298 | 12441 | 1.28 | 0.76 | 0.23 | 9.99762871103757e-78 | 3.368601017897e-73 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBA1B | 10376 | 18809 | 1.27 | 1 | 0.78 | 1.11883679813246e-80 | 3.7698087076275e-76 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | HIST1H4C | 8364 | 4787 | 1.25 | 0.69 | 0.36 | 6.37189603421299e-34 | 2.14694664976772e-29 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPF | 1063 | 1857 | 1.21 | 0.69 | 0.13 | 1.05126802710388e-97 | 3.5421424905238e-93 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | MKI67 | 4288 | 7107 | 1.14 | 0.58 | 0.09 | 4.1500108683233e-103 | 1.39830466197285e-98 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | SMC4 | 10051 | 14013 | 1.12 | 0.81 | 0.26 | 2.20094039523058e-75 | 7.41584856768992e-71 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUSAP1 | 51203 | 18538 | 1.1 | 0.64 | 0.14 | 5.30619724368337e-78 | 1.78787009928668e-73 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PTTG1 | 9232 | 9690 | 1.09 | 0.7 | 0.26 | 8.64542846523404e-48 | 2.91299066707596e-43 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | BIRC5 | 332 | 593 | 1.06 | 0.61 | 0.12 | 1.72258689206622e-81 | 5.80408427412791e-77 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDK1 | 983 | 1722 | 1.06 | 0.6 | 0.1 | 3.75528638646224e-103 | 1.26530619505459e-98 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL3A1 | 1281 | 2201 | 1.05 | 0.85 | 0.25 | 6.12668620163014e-75 | 2.06432564877726e-70 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL1A2 | 1278 | 2198 | 1.01 | 0.83 | 0.23 | 8.82629812907944e-74 | 2.97393289161203e-69 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCOLCE | 5118 | 8738 | 1 | 0.84 | 0.2 | 1.12617886385352e-88 | 3.79454706386804e-84 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFX | 3014 | 4739 | 0.97 | 0.67 | 0.26 | 9.46312935564761e-47 | 3.18850680509191e-42 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL1A1 | 1277 | 2197 | 0.96 | 0.84 | 0.26 | 4.17028144094755e-66 | 1.40513462871287e-61 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | RARRES2 | 5919 | 9868 | 0.95 | 0.67 | 0.18 | 3.10037066010835e-64 | 1.04463889021691e-59 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TK1 | 7083 | 11830 | 0.94 | 0.65 | 0.13 | 8.82258085708558e-90 | 2.97268039398641e-85 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CYP1B1 | 1545 | 2597 | 0.94 | 0.77 | 0.18 | 2.1253095942124e-84 | 7.16101814673926e-80 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFZ | 3015 | 4741 | 0.94 | 0.99 | 0.81 | 4.38545150883475e-62 | 1.47763403138678e-57 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | MAD2L1 | 4085 | 6763 | 0.94 | 0.71 | 0.2 | 7.25330362344713e-66 | 2.44392812288428e-61 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2T | 29089 | 25009 | 0.93 | 0.65 | 0.16 | 3.15228299194542e-72 | 1.06213023130609e-67 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | EMILIN1 | 11117 | 19880 | 0.93 | 0.72 | 0.14 | 2.17314233296187e-96 | 7.32218577668173e-92 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CKS1B | 1163 | 19083 | 0.91 | 0.8 | 0.34 | 6.73946276666098e-50 | 2.27079458459875e-45 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | ZWINT | 11130 | 13195 | 0.91 | 0.61 | 0.16 | 2.20503306654502e-63 | 7.42963841441679e-59 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBB6 | 84617 | 20776 | 0.9 | 0.62 | 0.11 | 6.74710540881046e-94 | 2.2733696964446e-89 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBB | 203068 | 20778 | 0.9 | 0.98 | 0.88 | 3.13900500064455e-60 | 1.05765634491717e-55 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | AURKB | 9212 | 11390 | 0.9 | 0.55 | 0.09 | 3.30377468989557e-95 | 1.11317384401341e-90 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | MXD3 | 83463 | 14008 | 0.87 | 0.41 | 0.05 | 1.25179396798499e-82 | 4.21779459572864e-78 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TPM2 | 7169 | 12011 | 0.86 | 0.83 | 0.27 | 1.54807047948254e-63 | 5.21606867356847e-59 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | RRM2 | 6241 | 10452 | 0.86 | 0.43 | 0.07 | 2.16756812105889e-67 | 7.30340402709584e-63 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | ARL6IP1 | 23204 | 697 | 0.84 | 0.72 | 0.55 | 1.02312763067769e-14 | 3.44732623880541e-10 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | GTSE1 | 51512 | 13698 | 0.81 | 0.48 | 0.08 | 3.07044978616809e-77 | 1.03455735095148e-72 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPK | 64105 | 29479 | 0.81 | 0.53 | 0.11 | 6.19915503864911e-65 | 2.08874329872243e-60 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | SMC2 | 10592 | 14011 | 0.8 | 0.65 | 0.2 | 3.16395773812753e-51 | 1.06606392028469e-46 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | DUT | 1854 | 3078 | 0.8 | 0.79 | 0.58 | 2.37105436088711e-23 | 7.98903056357302e-19 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | UBE2S | 27338 | 17895 | 0.79 | 0.75 | 0.42 | 8.94165960619501e-29 | 3.01280278771135e-24 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGN2 | 3151 | 4986 | 0.79 | 0.99 | 0.9 | 1.51398158260216e-57 | 5.10120954441971e-53 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | OLFML3 | 56944 | 24956 | 0.78 | 0.74 | 0.18 | 5.31363210122159e-70 | 1.7903752001856e-65 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TMSB15A | 11013 | 30744 | 0.78 | 0.74 | 0.3 | 1.39321208734783e-41 | 4.69428880710977e-37 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | FBLN1 | 2192 | 3600 | 0.78 | 0.75 | 0.34 | 5.30309586152273e-41 | 1.78682511958147e-36 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CALD1 | 800 | 1441 | 0.77 | 0.94 | 0.59 | 8.38710590819601e-45 | 2.82595146470756e-40 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PRC1 | 9055 | 9341 | 0.77 | 0.49 | 0.1 | 4.52365654694777e-61 | 1.52420083692858e-56 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TNC | 3371 | 5318 | 0.75 | 0.59 | 0.15 | 2.40266773800097e-53 | 8.09554867642046e-49 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDKN3 | 1033 | 1791 | 0.75 | 0.39 | 0.08 | 2.31629558357538e-45 | 7.80452633929888e-41 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | ASPM | 259266 | 19048 | 0.74 | 0.33 | 0.05 | 1.61472877075713e-52 | 5.44066712018907e-48 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF20B | 9585 | 7212 | 0.73 | 0.47 | 0.13 | 3.75676028438369e-42 | 1.26580281022024e-37 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUF2 | 83540 | 14621 | 0.73 | 0.43 | 0.07 | 2.49772231300479e-66 | 8.41582556143835e-62 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | FST | 10468 | 3971 | 0.73 | 0.41 | 0.1 | 1.69445639340022e-37 | 5.70930137192271e-33 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDC20 | 991 | 1723 | 0.73 | 0.33 | 0.07 | 4.08361144444499e-37 | 1.3759320400913e-32 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPU | 79682 | 21348 | 0.72 | 0.52 | 0.13 | 4.74882507606996e-50 | 1.60006912113101e-45 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | KPNA2 | 3838 | 6395 | 0.72 | 0.53 | 0.26 | 8.58249287068225e-20 | 2.89178514784768e-15 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CTSC | 1075 | 2528 | 0.71 | 0.82 | 0.32 | 1.33723341811898e-47 | 4.50567427901009e-43 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TPX2 | 22974 | 1249 | 0.71 | 0.38 | 0.07 | 1.2741725483355e-49 | 4.29319698436164e-45 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | EPB41L2 | 2037 | 3379 | 0.7 | 0.52 | 0.16 | 3.47082663834084e-38 | 1.16946032752256e-33 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCNB1 | 891 | 1579 | 0.7 | 0.37 | 0.11 | 4.93171699840832e-29 | 1.6616927254437e-24 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPW | 387103 | 21488 | 0.7 | 0.63 | 0.23 | 1.406396433139e-37 | 4.73871214181855e-33 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | H2AFV | 94239 | 20664 | 0.7 | 0.82 | 0.49 | 1.15997499954449e-34 | 3.90841976346522e-30 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF20A | 10112 | 9787 | 0.69 | 0.32 | 0.03 | 5.65329792916307e-73 | 1.90482220425221e-68 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PIMREG | 54478 | 25483 | 0.69 | 0.39 | 0.08 | 1.69902027098545e-47 | 5.72467890105838e-43 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | MYH10 | 4628 | 7568 | 0.69 | 0.74 | 0.36 | 9.92890006700997e-34 | 3.34544358857834e-29 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | SPC25 | 57405 | 24031 | 0.69 | 0.38 | 0.06 | 1.94405570307496e-62 | 6.55030128594078e-58 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TMEM106C | 79022 | 28775 | 0.69 | 0.58 | 0.24 | 1.19299569054784e-30 | 4.0196796797319e-26 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PCNA | 5111 | 8729 | 0.68 | 0.66 | 0.32 | 3.57370503825317e-27 | 1.20412417558902e-22 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF22 | 3835 | 6391 | 0.68 | 0.48 | 0.17 | 2.82974595427838e-30 | 9.53454601834559e-26 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CLSPN | 63967 | 19715 | 0.67 | 0.45 | 0.11 | 2.07691174055313e-45 | 6.99794641861973e-41 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | MIS18BP1 | 55320 | 20190 | 0.67 | 0.4 | 0.11 | 1.11430560351163e-32 | 3.75454130047209e-28 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCN1 | 3491 | 2654 | 0.67 | 0.84 | 0.55 | 2.35878387147786e-22 | 7.9476863765575e-18 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | TUBA1C | 84790 | 20768 | 0.67 | 0.47 | 0.2 | 7.35191434352717e-21 | 2.47715401890805e-16 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPA | 1058 | 1851 | 0.67 | 0.27 | 0.05 | 6.20034960176037e-39 | 2.08914579481714e-34 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CENPE | 1062 | 1856 | 0.66 | 0.32 | 0.04 | 1.36935037956654e-64 | 4.61388916891149e-60 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PBK | 55872 | 18282 | 0.66 | 0.41 | 0.09 | 2.41315124735353e-47 | 8.130871812833e-43 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | FBLN5 | 10516 | 3602 | 0.66 | 0.49 | 0.12 | 3.25851222391792e-42 | 1.0979231087269e-37 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCNB2 | 9133 | 1580 | 0.66 | 0.41 | 0.11 | 1.22931672847569e-33 | 4.14205978492598e-29 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CKS2 | 1164 | 2000 | 0.66 | 0.59 | 0.38 | 1.15790150841532e-14 | 3.90143334245458e-10 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | SGO2 | 151246 | 30812 | 0.65 | 0.33 | 0.06 | 6.32987788384789e-44 | 2.13278905418371e-39 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | C21orf58 | 54058 | 1300 | 0.65 | 0.46 | 0.11 | 6.50983198280843e-46 | 2.19342278828747e-41 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | LMNB1 | 4001 | 6637 | 0.64 | 0.46 | 0.14 | 9.76006945310174e-33 | 3.2885578015281e-28 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL6A3 | 1293 | 2213 | 0.64 | 0.62 | 0.19 | 6.67106330174896e-43 | 2.2477480688913e-38 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | SULT1E1 | 6783 | 11377 | 0.63 | 0.71 | 0.23 | 2.1776289808404e-42 | 7.33730308804365e-38 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | HMGB1 | 3146 | 4983 | 0.63 | 1 | 0.96 | 1.91277938911537e-48 | 6.44491887368533e-44 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | COL21A1 | 81578 | 17025 | 0.62 | 0.54 | 0.12 | 3.35060566109689e-56 | 1.12895307144998e-51 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDKN2C | 1031 | 1789 | 0.62 | 0.26 | 0.01 | 5.0689853703851e-135 | 1.70794393069755e-130 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | GGH | 8836 | 4248 | 0.62 | 0.59 | 0.24 | 5.18035319526372e-30 | 1.74546820561216e-25 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CDCA4 | 55038 | 14625 | 0.62 | 0.45 | 0.13 | 8.14837963031242e-36 | 2.74551503263747e-31 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | B2M | 567 | 914 | 0.61 | 0.99 | 0.82 | 3.19690561385383e-40 | 1.07716537753191e-35 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | NUCKS1 | 64710 | 29923 | 0.61 | 0.97 | 0.84 | 1.12253217813048e-33 | 3.78225992099284e-29 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | USP1 | 7398 | 12607 | 0.61 | 0.55 | 0.24 | 1.20080990676936e-25 | 4.04600889986867e-21 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PSRC1 | 84722 | 24472 | 0.6 | 0.32 | 0.06 | 1.75548979069912e-38 | 5.91494730078161e-34 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | PDGFRA | 5156 | 8803 | 0.6 | 0.55 | 0.13 | 1.38054519700036e-52 | 4.65160898677301e-48 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | ITM2A | 9452 | 6173 | 0.6 | 0.53 | 0.13 | 2.58441587325291e-49 | 8.70793084333837e-45 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | KIF23 | 9493 | 6392 | 0.6 | 0.34 | 0.05 | 4.86350774056782e-60 | 1.63871029810692e-55 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | EMCN | 51705 | 16041 | 0.59 | 0.59 | 0.15 | 3.47961313850889e-51 | 1.17242085088919e-46 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | CCDC34 | 91057 | 25079 | 0.59 | 0.59 | 0.26 | 1.04618517337777e-25 | 3.52501632317906e-21 |
74 | 6 | IPC | Interstitial progenitor cell | wk16 | RAD51AP1 | 10635 | 16956 | 0.59 | 0.42 | 0.1 | 5.17142617010602e-45 | 1.74246033375552e-40 |