Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
| dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 74 | 5 | ICb | Interstitial cells b | wk16 | SULT1E1 | 6783 | 11377 | 2.48 | 0.94 | 0.17 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CTSC | 1075 | 2528 | 1.9 | 0.92 | 0.26 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PRSS23 | 11098 | 14370 | 1.81 | 0.84 | 0.17 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CLDN11 | 5010 | 8514 | 1.79 | 0.74 | 0.1 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL3A1 | 1281 | 2201 | 1.73 | 0.93 | 0.19 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SFRP1 | 6422 | 10776 | 1.73 | 0.75 | 0.19 | 8.4688442028236E-294 | 2.8534923656994E-289 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL1A1 | 1277 | 2197 | 1.73 | 0.95 | 0.19 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | DCN | 1634 | 2705 | 1.69 | 0.79 | 0.14 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MFAP4 | 4239 | 7035 | 1.58 | 0.83 | 0.16 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MOXD1 | 26002 | 21063 | 1.56 | 0.78 | 0.12 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL1A2 | 1278 | 2198 | 1.53 | 0.89 | 0.18 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TCF21 | 6943 | 11632 | 1.47 | 0.94 | 0.33 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ALX1 | 8092 | 1494 | 1.4 | 0.6 | 0.06 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | OLFML3 | 56944 | 24956 | 1.4 | 0.77 | 0.13 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PCOLCE | 5118 | 8738 | 1.4 | 0.81 | 0.16 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | IGFBP5 | 3488 | 5474 | 1.38 | 0.78 | 0.17 | 7.530854288035E-306 | 2.5374460438105E-301 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CPE | 1363 | 2303 | 1.38 | 0.71 | 0.18 | 1.6857845218105E-263 | 5.6800823677884E-259 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LGALS1 | 3956 | 6561 | 1.38 | 0.99 | 0.34 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TNC | 3371 | 5318 | 1.38 | 0.69 | 0.1 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PTN | 5764 | 9630 | 1.35 | 0.87 | 0.38 | 8.0016370975514E-233 | 2.696071603649E-228 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | GUCY1A1 | 2982 | 4685 | 1.33 | 0.64 | 0.1 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TGFBI | 7045 | 11771 | 1.33 | 0.63 | 0.09 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL6A3 | 1293 | 2213 | 1.31 | 0.72 | 0.14 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | AKAP12 | 9590 | 370 | 1.29 | 0.9 | 0.49 | 2.3733375774452E-228 | 7.9967236334438E-224 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PDGFRA | 5156 | 8803 | 1.29 | 0.6 | 0.08 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ZEB2 | 9839 | 14881 | 1.28 | 0.7 | 0.17 | 5.7583125037394E-276 | 1.9402058150099E-271 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | NTM | 50863 | 17941 | 1.27 | 0.59 | 0.09 | 7.69429529167E-302 | 2.5925158555753E-297 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PLAC9 | 219348 | 19255 | 1.26 | 0.66 | 0.1 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | OGN | 4969 | 8126 | 1.22 | 0.5 | 0.04 | 0 | 0 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MYLK | 4638 | 7590 | 1.2 | 0.56 | 0.1 | 6.1468228494186E-251 | 2.0711104908831E-246 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | FBLN5 | 10516 | 3602 | 1.18 | 0.56 | 0.08 | 1.1877205503275E-277 | 4.0019056222734E-273 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SYT1 | 6857 | 11509 | 1.17 | 0.63 | 0.2 | 5.8358135110515E-189 | 1.9663190044137E-184 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MMP2 | 4313 | 7166 | 1.16 | 0.63 | 0.12 | 2.8026878158381E-266 | 9.4433763266849E-262 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CALD1 | 800 | 1441 | 1.15 | 0.91 | 0.56 | 9.6634457058409E-201 | 3.256001396126E-196 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CYP1B1 | 1545 | 2597 | 1.14 | 0.65 | 0.14 | 3.2617900502701E-241 | 1.099027539538E-236 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TMX4 | 56255 | 25237 | 1.13 | 0.44 | 0.24 | 7.669366819484E-53 | 2.5841164561569E-48 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | AGTR2 | 186 | 338 | 1.12 | 0.46 | 0.05 | 3.3569082020131E-261 | 1.1310766495863E-256 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | GPC3 | 2719 | 4451 | 1.12 | 0.99 | 0.74 | 6.4643985244354E-238 | 2.1781144388233E-233 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LUM | 4060 | 6724 | 1.12 | 0.24 | 0.02 | 1.4304432981126E-168 | 4.8197356486606E-164 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PLK2 | 10769 | 19699 | 1.1 | 0.6 | 0.28 | 7.2223858344836E-112 | 2.4335106830709E-107 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ATP2B1 | 490 | 814 | 1.09 | 0.8 | 0.55 | 8.4187334990487E-138 | 2.8366080651695E-133 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LRRC17 | 10234 | 16895 | 1.09 | 0.52 | 0.08 | 8.0997124590655E-243 | 2.7291171159575E-238 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL21A1 | 81578 | 17025 | 1.08 | 0.51 | 0.08 | 3.3025785675017E-233 | 1.112770822534E-228 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CHODL | 140578 | 17807 | 1.08 | 0.36 | 0.04 | 1.8027080906614E-188 | 6.0740446406745E-184 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | GRID2 | 2895 | 4576 | 1.07 | 0.41 | 0.04 | 2.3467581188394E-259 | 7.9071668056174E-255 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | APCDD1 | 147495 | 15718 | 1.04 | 0.34 | 0.04 | 1.913318524338E-170 | 6.4467354359046E-166 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PCDH18 | 54510 | 14268 | 1.02 | 0.52 | 0.12 | 5.1763937472949E-183 | 1.7441341092135E-178 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | FLRT2 | 23768 | 3761 | 1.01 | 0.5 | 0.1 | 4.4730396729493E-189 | 1.5071459874036E-184 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MEG3 | 55384 | 14575 | 0.99 | 0.71 | 0.27 | 2.4645398044504E-159 | 8.3040204171151E-155 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | VCAN | 1462 | 2464 | 0.95 | 0.77 | 0.39 | 3.4036012584353E-140 | 1.1468094080172E-135 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PLAT | 5327 | 9051 | 0.95 | 0.52 | 0.14 | 4.088873588545E-151 | 1.3777050669243E-146 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EMILIN1 | 11117 | 19880 | 0.94 | 0.52 | 0.11 | 1.580740255237E-182 | 5.3261462159954E-178 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PRICKLE1 | 144165 | 17019 | 0.94 | 0.4 | 0.06 | 1.3445421036385E-187 | 4.5303001639995E-183 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ITM2A | 9452 | 6173 | 0.93 | 0.43 | 0.1 | 1.9866922679146E-126 | 6.6939609275116E-122 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TAGLN | 6876 | 11553 | 0.93 | 0.5 | 0.13 | 3.1530776168695E-146 | 1.062397972228E-141 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SERPINE2 | 5270 | 8951 | 0.93 | 0.5 | 0.18 | 2.6921140226024E-111 | 9.0708089877565E-107 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL5A2 | 1290 | 2210 | 0.92 | 0.47 | 0.1 | 4.3631690272194E-174 | 1.4701261720313E-169 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MDFI | 4188 | 6967 | 0.92 | 0.48 | 0.1 | 3.4951387341201E-180 | 1.1776520450744E-175 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | C7 | 730 | 1346 | 0.91 | 0.32 | 0.04 | 2.0988936317999E-152 | 7.0720122029865E-148 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CLMP | 79827 | 24039 | 0.9 | 0.42 | 0.07 | 5.7395928351825E-175 | 1.9338984098864E-170 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL4A1 | 1282 | 2202 | 0.9 | 0.54 | 0.22 | 1.4230221605464E-109 | 4.794730867745E-105 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | IGFBP7 | 3490 | 5476 | 0.89 | 0.95 | 0.54 | 6.7762281436684E-168 | 2.2831823107276E-163 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TSHZ2 | 128553 | 13010 | 0.88 | 0.51 | 0.19 | 2.1851173035705E-99 | 7.3625342426503E-95 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL6A2 | 1292 | 2212 | 0.87 | 0.57 | 0.2 | 2.6516850666075E-135 | 8.9345876634273E-131 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CDH11 | 1009 | 1750 | 0.85 | 0.5 | 0.16 | 3.1142074344972E-125 | 1.0493010529795E-120 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CCBE1 | 147372 | 29426 | 0.85 | 0.43 | 0.11 | 5.3100484000927E-124 | 1.7891677079273E-119 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SERPINH1 | 871 | 1546 | 0.83 | 0.81 | 0.54 | 8.269720295306E-120 | 2.7863995563004E-115 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | NKAIN4 | 128414 | 16191 | 0.82 | 0.49 | 0.2 | 6.0806360908968E-91 | 2.0488095244668E-86 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EMCN | 51705 | 16041 | 0.82 | 0.47 | 0.12 | 4.6195467515336E-124 | 1.5565100824617E-119 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TPM2 | 7169 | 12011 | 0.81 | 0.65 | 0.25 | 9.0238717818744E-131 | 3.0405033581848E-126 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | NR2F2-AS1 | 644192 | 44222 | 0.81 | 0.51 | 0.19 | 1.9718990173332E-107 | 6.6441165490024E-103 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SH3BGRL | 6451 | 10823 | 0.79 | 0.73 | 0.49 | 1.9172879308143E-102 | 6.4601099540856E-98 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LDB2 | 9079 | 6533 | 0.79 | 0.39 | 0.1 | 1.0616505322929E-112 | 3.5771253035077E-108 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LBH | 81606 | 29532 | 0.78 | 0.55 | 0.28 | 1.4366921488562E-76 | 4.8407905263559E-72 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | KCNQ1OT1 | 10984 | 6295 | 0.78 | 0.7 | 0.46 | 5.2439766289435E-81 | 1.7669054853562E-76 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | LMO4 | 8543 | 6644 | 0.77 | 0.61 | 0.42 | 3.0338081012742E-58 | 1.0222113016433E-53 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MARCKS | 4082 | 6759 | 0.77 | 0.94 | 0.77 | 3.0127232512109E-138 | 1.015106972263E-133 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | FSTL1 | 11167 | 3972 | 0.76 | 0.53 | 0.29 | 4.1901567327679E-68 | 1.4118314095388E-63 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | BASP1 | 10409 | 957 | 0.76 | 0.67 | 0.44 | 8.0742995570383E-75 | 2.7205544927485E-70 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CRABP1 | 1381 | 2338 | 0.75 | 0.33 | 0.09 | 9.8743536146239E-85 | 3.3270647069114E-80 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | CAVIN1 | 284119 | 9688 | 0.75 | 0.37 | 0.12 | 2.3970270894297E-80 | 8.0765430751245E-76 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ANGPT1 | 284 | 484 | 0.75 | 0.31 | 0.06 | 1.6019175192306E-109 | 5.3975008892957E-105 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | NR2F2 | 7026 | 7976 | 0.73 | 0.87 | 0.67 | 1.2223703418298E-111 | 4.1186546297614E-107 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | PLPP1 | 8611 | 9228 | 0.73 | 0.43 | 0.18 | 3.6854487263183E-72 | 1.2417750938457E-67 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | BGN | 633 | 1044 | 0.73 | 0.39 | 0.11 | 4.9337271355429E-94 | 1.6623700210498E-89 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COLEC12 | 81035 | 16016 | 0.72 | 0.32 | 0.06 | 1.9409611889769E-115 | 6.5398746301387E-111 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | TMSB4X | 7114 | 11881 | 0.72 | 1 | 0.99 | 3.885269345785E-183 | 1.3091026533688E-178 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | C1S | 716 | 1247 | 0.72 | 0.29 | 0.03 | 3.2386025761487E-152 | 1.0912147520075E-147 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EDNRA | 1909 | 3179 | 0.71 | 0.35 | 0.09 | 3.8911765418952E-98 | 1.3110930240262E-93 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | HSD17B2 | 3294 | 5211 | 0.71 | 0.21 | 0.02 | 2.3079541996445E-132 | 7.7764208802822E-128 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | MAGED2 | 10916 | 16353 | 0.71 | 0.91 | 0.73 | 3.6103845542699E-117 | 1.2164829717157E-112 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | FN1 | 2335 | 3778 | 0.7 | 0.43 | 0.13 | 9.5259873267697E-96 | 3.2096861698818E-91 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EXTL2 | 2135 | 3516 | 0.69 | 0.48 | 0.24 | 2.1052058355078E-68 | 7.0932805421599E-64 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SLC40A1 | 30061 | 10909 | 0.69 | 0.32 | 0.1 | 4.7554020827954E-72 | 1.6022851777771E-67 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | KANK2 | 25959 | 29300 | 0.69 | 0.35 | 0.11 | 1.5645555905985E-77 | 5.2716136069626E-73 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | COL5A1 | 1289 | 2209 | 0.69 | 0.29 | 0.06 | 9.7852372633938E-92 | 3.2970378435279E-87 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EDNRB | 1910 | 3180 | 0.68 | 0.28 | 0.05 | 1.3075653072875E-100 | 4.4057105463746E-96 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | ZNF106 | 64397 | 12886 | 0.68 | 0.43 | 0.21 | 3.6956036986165E-57 | 1.2451967102118E-52 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | SEPTIN11 | 55752 | 25589 | 0.68 | 0.75 | 0.51 | 4.3790349702078E-84 | 1.4754720428618E-79 |
| 74 | 5 | ICb | Interstitial cells b | wk16 | EFEMP2 | 30008 | 3219 | 0.68 | 0.5 | 0.28 | 1.8353869116539E-59 | 6.1841526601267E-55 |