Marker Genes
Dataset: Single-cell transcriptomics reveals gene expression dynamics of human fetal kidney development
- tissue: Kidney
- ontology: Kidney
- genotype: -
- stage: Fetal
- treatment condition: WT
- cell/nucleus: Cells
- pmid: 30789893
- subset name: wk16
- total genes: Not reported
- clustering: scran
- pseudotime: Monocle 2
- link: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE114530
Rows:100
dataset id | cluster id | cluster name | cell type name | sample id | gene symbol | entrez geneid | species specific geneid |
avg log fc (?)
|
pct 1 | pct 2 | p value | padj |
---|---|---|---|---|---|---|---|---|---|---|---|---|
74 | 5 | ICb | Interstitial cells b | wk16 | SULT1E1 | 6783 | 11377 | 2.48 | 0.94 | 0.17 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | CTSC | 1075 | 2528 | 1.9 | 0.92 | 0.26 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | PRSS23 | 11098 | 14370 | 1.81 | 0.84 | 0.17 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | CLDN11 | 5010 | 8514 | 1.79 | 0.74 | 0.1 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL3A1 | 1281 | 2201 | 1.73 | 0.93 | 0.19 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | SFRP1 | 6422 | 10776 | 1.73 | 0.75 | 0.19 | 8.46884420282361e-294 | 2.85349236569939e-289 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL1A1 | 1277 | 2197 | 1.73 | 0.95 | 0.19 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | DCN | 1634 | 2705 | 1.69 | 0.79 | 0.14 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | MFAP4 | 4239 | 7035 | 1.58 | 0.83 | 0.16 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | MOXD1 | 26002 | 21063 | 1.56 | 0.78 | 0.12 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL1A2 | 1278 | 2198 | 1.53 | 0.89 | 0.18 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | TCF21 | 6943 | 11632 | 1.47 | 0.94 | 0.33 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | ALX1 | 8092 | 1494 | 1.4 | 0.6 | 0.06 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | OLFML3 | 56944 | 24956 | 1.4 | 0.77 | 0.13 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | PCOLCE | 5118 | 8738 | 1.4 | 0.81 | 0.16 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | IGFBP5 | 3488 | 5474 | 1.38 | 0.78 | 0.17 | 7.53085428803505e-306 | 2.53744604381053e-301 |
74 | 5 | ICb | Interstitial cells b | wk16 | CPE | 1363 | 2303 | 1.38 | 0.71 | 0.18 | 1.68578452181052e-263 | 5.68008236778836e-259 |
74 | 5 | ICb | Interstitial cells b | wk16 | LGALS1 | 3956 | 6561 | 1.38 | 0.99 | 0.34 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | TNC | 3371 | 5318 | 1.38 | 0.69 | 0.1 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | PTN | 5764 | 9630 | 1.35 | 0.87 | 0.38 | 8.00163709755142e-233 | 2.69607160364897e-228 |
74 | 5 | ICb | Interstitial cells b | wk16 | GUCY1A1 | 2982 | 4685 | 1.33 | 0.64 | 0.1 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | TGFBI | 7045 | 11771 | 1.33 | 0.63 | 0.09 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL6A3 | 1293 | 2213 | 1.31 | 0.72 | 0.14 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | AKAP12 | 9590 | 370 | 1.29 | 0.9 | 0.49 | 2.37333757744517e-228 | 7.99672363344376e-224 |
74 | 5 | ICb | Interstitial cells b | wk16 | PDGFRA | 5156 | 8803 | 1.29 | 0.6 | 0.08 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | ZEB2 | 9839 | 14881 | 1.28 | 0.7 | 0.17 | 5.75831250373936e-276 | 1.94020581500994e-271 |
74 | 5 | ICb | Interstitial cells b | wk16 | NTM | 50863 | 17941 | 1.27 | 0.59 | 0.09 | 7.69429529166995e-302 | 2.59251585557527e-297 |
74 | 5 | ICb | Interstitial cells b | wk16 | PLAC9 | 219348 | 19255 | 1.26 | 0.66 | 0.1 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | OGN | 4969 | 8126 | 1.22 | 0.5 | 0.04 | 0 | 0 |
74 | 5 | ICb | Interstitial cells b | wk16 | MYLK | 4638 | 7590 | 1.2 | 0.56 | 0.1 | 6.14682284941863e-251 | 2.07111049088311e-246 |
74 | 5 | ICb | Interstitial cells b | wk16 | FBLN5 | 10516 | 3602 | 1.18 | 0.56 | 0.08 | 1.18772055032749e-277 | 4.00190562227343e-273 |
74 | 5 | ICb | Interstitial cells b | wk16 | SYT1 | 6857 | 11509 | 1.17 | 0.63 | 0.2 | 5.83581351105146e-189 | 1.96631900441368e-184 |
74 | 5 | ICb | Interstitial cells b | wk16 | MMP2 | 4313 | 7166 | 1.16 | 0.63 | 0.12 | 2.80268781583812e-266 | 9.44337632668495e-262 |
74 | 5 | ICb | Interstitial cells b | wk16 | CALD1 | 800 | 1441 | 1.15 | 0.91 | 0.56 | 9.66344570584089e-201 | 3.25600139612603e-196 |
74 | 5 | ICb | Interstitial cells b | wk16 | CYP1B1 | 1545 | 2597 | 1.14 | 0.65 | 0.14 | 3.26179005027014e-241 | 1.09902753953802e-236 |
74 | 5 | ICb | Interstitial cells b | wk16 | TMX4 | 56255 | 25237 | 1.13 | 0.44 | 0.24 | 7.669366819484e-53 | 2.58411645615694e-48 |
74 | 5 | ICb | Interstitial cells b | wk16 | AGTR2 | 186 | 338 | 1.12 | 0.46 | 0.05 | 3.35690820201313e-261 | 1.1310766495863e-256 |
74 | 5 | ICb | Interstitial cells b | wk16 | GPC3 | 2719 | 4451 | 1.12 | 0.99 | 0.74 | 6.46439852443537e-238 | 2.17811443882325e-233 |
74 | 5 | ICb | Interstitial cells b | wk16 | LUM | 4060 | 6724 | 1.12 | 0.24 | 0.02 | 1.43044329811259e-168 | 4.81973564866058e-164 |
74 | 5 | ICb | Interstitial cells b | wk16 | PLK2 | 10769 | 19699 | 1.1 | 0.6 | 0.28 | 7.22238583448364e-112 | 2.43351068307092e-107 |
74 | 5 | ICb | Interstitial cells b | wk16 | ATP2B1 | 490 | 814 | 1.09 | 0.8 | 0.55 | 8.41873349904874e-138 | 2.83660806516948e-133 |
74 | 5 | ICb | Interstitial cells b | wk16 | LRRC17 | 10234 | 16895 | 1.09 | 0.52 | 0.08 | 8.09971245906547e-243 | 2.72911711595752e-238 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL21A1 | 81578 | 17025 | 1.08 | 0.51 | 0.08 | 3.30257856750173e-233 | 1.11277082253403e-228 |
74 | 5 | ICb | Interstitial cells b | wk16 | CHODL | 140578 | 17807 | 1.08 | 0.36 | 0.04 | 1.8027080906614e-188 | 6.07404464067451e-184 |
74 | 5 | ICb | Interstitial cells b | wk16 | GRID2 | 2895 | 4576 | 1.07 | 0.41 | 0.04 | 2.34675811883939e-259 | 7.90716680561743e-255 |
74 | 5 | ICb | Interstitial cells b | wk16 | APCDD1 | 147495 | 15718 | 1.04 | 0.34 | 0.04 | 1.91331852433805e-170 | 6.44673543590464e-166 |
74 | 5 | ICb | Interstitial cells b | wk16 | PCDH18 | 54510 | 14268 | 1.02 | 0.52 | 0.12 | 5.17639374729487e-183 | 1.74413410921353e-178 |
74 | 5 | ICb | Interstitial cells b | wk16 | FLRT2 | 23768 | 3761 | 1.01 | 0.5 | 0.1 | 4.47303967294934e-189 | 1.50714598740355e-184 |
74 | 5 | ICb | Interstitial cells b | wk16 | MEG3 | 55384 | 14575 | 0.99 | 0.71 | 0.27 | 2.46453980445038e-159 | 8.30402041711512e-155 |
74 | 5 | ICb | Interstitial cells b | wk16 | VCAN | 1462 | 2464 | 0.95 | 0.77 | 0.39 | 3.40360125843535e-140 | 1.14680940801721e-135 |
74 | 5 | ICb | Interstitial cells b | wk16 | PLAT | 5327 | 9051 | 0.95 | 0.52 | 0.14 | 4.08887358854495e-151 | 1.37770506692434e-146 |
74 | 5 | ICb | Interstitial cells b | wk16 | EMILIN1 | 11117 | 19880 | 0.94 | 0.52 | 0.11 | 1.58074025523696e-182 | 5.3261462159954e-178 |
74 | 5 | ICb | Interstitial cells b | wk16 | PRICKLE1 | 144165 | 17019 | 0.94 | 0.4 | 0.06 | 1.34454210363847e-187 | 4.53030016399945e-183 |
74 | 5 | ICb | Interstitial cells b | wk16 | ITM2A | 9452 | 6173 | 0.93 | 0.43 | 0.1 | 1.98669226791464e-126 | 6.6939609275116e-122 |
74 | 5 | ICb | Interstitial cells b | wk16 | TAGLN | 6876 | 11553 | 0.93 | 0.5 | 0.13 | 3.15307761686946e-146 | 1.062397972228e-141 |
74 | 5 | ICb | Interstitial cells b | wk16 | SERPINE2 | 5270 | 8951 | 0.93 | 0.5 | 0.18 | 2.6921140226024e-111 | 9.07080898775652e-107 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL5A2 | 1290 | 2210 | 0.92 | 0.47 | 0.1 | 4.36316902721941e-174 | 1.47012617203131e-169 |
74 | 5 | ICb | Interstitial cells b | wk16 | MDFI | 4188 | 6967 | 0.92 | 0.48 | 0.1 | 3.49513873412008e-180 | 1.17765204507442e-175 |
74 | 5 | ICb | Interstitial cells b | wk16 | C7 | 730 | 1346 | 0.91 | 0.32 | 0.04 | 2.09889363179987e-152 | 7.07201220298648e-148 |
74 | 5 | ICb | Interstitial cells b | wk16 | CLMP | 79827 | 24039 | 0.9 | 0.42 | 0.07 | 5.73959283518246e-175 | 1.93389840988638e-170 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL4A1 | 1282 | 2202 | 0.9 | 0.54 | 0.22 | 1.4230221605464e-109 | 4.79473086774505e-105 |
74 | 5 | ICb | Interstitial cells b | wk16 | IGFBP7 | 3490 | 5476 | 0.89 | 0.95 | 0.54 | 6.77622814366843e-168 | 2.28318231072764e-163 |
74 | 5 | ICb | Interstitial cells b | wk16 | TSHZ2 | 128553 | 13010 | 0.88 | 0.51 | 0.19 | 2.18511730357046e-99 | 7.36253424265029e-95 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL6A2 | 1292 | 2212 | 0.87 | 0.57 | 0.2 | 2.6516850666075e-135 | 8.93458766342732e-131 |
74 | 5 | ICb | Interstitial cells b | wk16 | CDH11 | 1009 | 1750 | 0.85 | 0.5 | 0.16 | 3.1142074344972e-125 | 1.04930105297949e-120 |
74 | 5 | ICb | Interstitial cells b | wk16 | CCBE1 | 147372 | 29426 | 0.85 | 0.43 | 0.11 | 5.31004840009273e-124 | 1.78916770792725e-119 |
74 | 5 | ICb | Interstitial cells b | wk16 | SERPINH1 | 871 | 1546 | 0.83 | 0.81 | 0.54 | 8.26972029530604e-120 | 2.78639955630042e-115 |
74 | 5 | ICb | Interstitial cells b | wk16 | NKAIN4 | 128414 | 16191 | 0.82 | 0.49 | 0.2 | 6.0806360908968e-91 | 2.04880952446677e-86 |
74 | 5 | ICb | Interstitial cells b | wk16 | EMCN | 51705 | 16041 | 0.82 | 0.47 | 0.12 | 4.61954675153364e-124 | 1.55651008246174e-119 |
74 | 5 | ICb | Interstitial cells b | wk16 | TPM2 | 7169 | 12011 | 0.81 | 0.65 | 0.25 | 9.02387178187442e-131 | 3.04050335818477e-126 |
74 | 5 | ICb | Interstitial cells b | wk16 | NR2F2-AS1 | 644192 | 44222 | 0.81 | 0.51 | 0.19 | 1.97189901733318e-107 | 6.64411654900242e-103 |
74 | 5 | ICb | Interstitial cells b | wk16 | SH3BGRL | 6451 | 10823 | 0.79 | 0.73 | 0.49 | 1.91728793081428e-102 | 6.46010995408563e-98 |
74 | 5 | ICb | Interstitial cells b | wk16 | LDB2 | 9079 | 6533 | 0.79 | 0.39 | 0.1 | 1.06165053229289e-112 | 3.57712530350768e-108 |
74 | 5 | ICb | Interstitial cells b | wk16 | LBH | 81606 | 29532 | 0.78 | 0.55 | 0.28 | 1.43669214885616e-76 | 4.84079052635594e-72 |
74 | 5 | ICb | Interstitial cells b | wk16 | KCNQ1OT1 | 10984 | 6295 | 0.78 | 0.7 | 0.46 | 5.2439766289435e-81 | 1.76690548535622e-76 |
74 | 5 | ICb | Interstitial cells b | wk16 | LMO4 | 8543 | 6644 | 0.77 | 0.61 | 0.42 | 3.03380810127418e-58 | 1.02221130164332e-53 |
74 | 5 | ICb | Interstitial cells b | wk16 | MARCKS | 4082 | 6759 | 0.77 | 0.94 | 0.77 | 3.01272325121095e-138 | 1.01510697226302e-133 |
74 | 5 | ICb | Interstitial cells b | wk16 | FSTL1 | 11167 | 3972 | 0.76 | 0.53 | 0.29 | 4.19015673276788e-68 | 1.41183140953881e-63 |
74 | 5 | ICb | Interstitial cells b | wk16 | BASP1 | 10409 | 957 | 0.76 | 0.67 | 0.44 | 8.07429955703827e-75 | 2.72055449274848e-70 |
74 | 5 | ICb | Interstitial cells b | wk16 | CRABP1 | 1381 | 2338 | 0.75 | 0.33 | 0.09 | 9.87435361462389e-85 | 3.32706470691137e-80 |
74 | 5 | ICb | Interstitial cells b | wk16 | CAVIN1 | 284119 | 9688 | 0.75 | 0.37 | 0.12 | 2.39702708942973e-80 | 8.07654307512453e-76 |
74 | 5 | ICb | Interstitial cells b | wk16 | ANGPT1 | 284 | 484 | 0.75 | 0.31 | 0.06 | 1.60191751923063e-109 | 5.3975008892957e-105 |
74 | 5 | ICb | Interstitial cells b | wk16 | NR2F2 | 7026 | 7976 | 0.73 | 0.87 | 0.67 | 1.22237034182983e-111 | 4.11865462976143e-107 |
74 | 5 | ICb | Interstitial cells b | wk16 | PLPP1 | 8611 | 9228 | 0.73 | 0.43 | 0.18 | 3.68544872631828e-72 | 1.24177509384568e-67 |
74 | 5 | ICb | Interstitial cells b | wk16 | BGN | 633 | 1044 | 0.73 | 0.39 | 0.11 | 4.93372713554286e-94 | 1.66237002104981e-89 |
74 | 5 | ICb | Interstitial cells b | wk16 | COLEC12 | 81035 | 16016 | 0.72 | 0.32 | 0.06 | 1.94096118897689e-115 | 6.53987463013873e-111 |
74 | 5 | ICb | Interstitial cells b | wk16 | TMSB4X | 7114 | 11881 | 0.72 | 1 | 0.99 | 3.88526934578505e-183 | 1.30910265336882e-178 |
74 | 5 | ICb | Interstitial cells b | wk16 | C1S | 716 | 1247 | 0.72 | 0.29 | 0.03 | 3.2386025761487e-152 | 1.09121475200754e-147 |
74 | 5 | ICb | Interstitial cells b | wk16 | EDNRA | 1909 | 3179 | 0.71 | 0.35 | 0.09 | 3.89117654189518e-98 | 1.31109302402616e-93 |
74 | 5 | ICb | Interstitial cells b | wk16 | HSD17B2 | 3294 | 5211 | 0.71 | 0.21 | 0.02 | 2.3079541996445e-132 | 7.77642088028218e-128 |
74 | 5 | ICb | Interstitial cells b | wk16 | MAGED2 | 10916 | 16353 | 0.71 | 0.91 | 0.73 | 3.61038455426985e-117 | 1.21648297171568e-112 |
74 | 5 | ICb | Interstitial cells b | wk16 | FN1 | 2335 | 3778 | 0.7 | 0.43 | 0.13 | 9.52598732676968e-96 | 3.20968616988178e-91 |
74 | 5 | ICb | Interstitial cells b | wk16 | EXTL2 | 2135 | 3516 | 0.69 | 0.48 | 0.24 | 2.10520583550777e-68 | 7.09328054215988e-64 |
74 | 5 | ICb | Interstitial cells b | wk16 | SLC40A1 | 30061 | 10909 | 0.69 | 0.32 | 0.1 | 4.75540208279538e-72 | 1.60228517777708e-67 |
74 | 5 | ICb | Interstitial cells b | wk16 | KANK2 | 25959 | 29300 | 0.69 | 0.35 | 0.11 | 1.56455559059849e-77 | 5.27161360696256e-73 |
74 | 5 | ICb | Interstitial cells b | wk16 | COL5A1 | 1289 | 2209 | 0.69 | 0.29 | 0.06 | 9.78523726339382e-92 | 3.29703784352791e-87 |
74 | 5 | ICb | Interstitial cells b | wk16 | EDNRB | 1910 | 3180 | 0.68 | 0.28 | 0.05 | 1.30756530728753e-100 | 4.40571054637461e-96 |
74 | 5 | ICb | Interstitial cells b | wk16 | ZNF106 | 64397 | 12886 | 0.68 | 0.43 | 0.21 | 3.69560369861645e-57 | 1.24519671021183e-52 |
74 | 5 | ICb | Interstitial cells b | wk16 | SEPTIN11 | 55752 | 25589 | 0.68 | 0.75 | 0.51 | 4.37903497020784e-84 | 1.47547204286183e-79 |
74 | 5 | ICb | Interstitial cells b | wk16 | EFEMP2 | 30008 | 3219 | 0.68 | 0.5 | 0.28 | 1.8353869116539e-59 | 6.18415266012665e-55 |